RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 AMOTL2Q9Y2J4 779 aa13.83□□□□□ -0.2
CALD1-211ENST00000445569 NALCNQ8IZF0 1738 aa13.83□□□□□ -0.2
CALD1-211ENST00000445569 TOM1O60784 492 aa13.82□□□□□ -0.2
CALD1-211ENST00000445569 ZNF692Q9BU19 519 aaPredicted RBP13.82□□□□□ -0.2
CALD1-211ENST00000445569 CDK12Q9NYV4 1490 aaPredicted RBP13.81□□□□□ -0.2
CALD1-211ENST00000445569 LRRC7Q96NW7 1537 aa13.81□□□□□ -0.2
CALD1-211ENST00000445569 NKTRP30414 1462 aaKnown RBP13.8□□□□□ -0.2
CALD1-211ENST00000445569 FYB1O15117 783 aa13.8□□□□□ -0.2
CALD1-211ENST00000445569 USP54Q70EL1 1684 aa13.79□□□□□ -0.2
CALD1-211ENST00000445569 MTHFSP49914 203 aa13.79□□□□□ -0.2
CALD1-211ENST00000445569 GGNBP2Q9H3C7 697 aa13.79□□□□□ -0.2
CALD1-211ENST00000445569 AATKQ6ZMQ8 1374 aa13.79□□□□□ -0.2
CALD1-211ENST00000445569 USP6P35125 1406 aa13.79□□□□□ -0.2
CALD1-211ENST00000445569 PLEKHG3A1L390 1219 aa13.78□□□□□ -0.2
CALD1-211ENST00000445569 TNNT2P45379 298 aaPredicted RBP13.78□□□□□ -0.2
CALD1-211ENST00000445569 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
CALD1-211ENST00000445569 PRR36Q9H6K5 1346 aa13.78□□□□□ -0.2
CALD1-211ENST00000445569 PIP4K2BP78356 416 aa13.77□□□□□ -0.21
CALD1-211ENST00000445569 RNF123Q5XPI4 1314 aa13.77□□□□□ -0.21
CALD1-211ENST00000445569 ADGRL3Q9HAR2 1447 aa13.77□□□□□ -0.21
CALD1-211ENST00000445569 PNPLA6Q8IY17 1366 aa13.76□□□□□ -0.21
CALD1-211ENST00000445569 ZNF521Q96K83 1311 aa13.76□□□□□ -0.21
CALD1-211ENST00000445569 KCNA6P17658 529 aa13.76□□□□□ -0.21
CALD1-211ENST00000445569 MAP2P11137 1827 aaKnown RBP13.76□□□□□ -0.21
CALD1-211ENST00000445569 TTC21AQ8NDW8 1320 aa13.75□□□□□ -0.21
CALD1-211ENST00000445569 RUNDC1Q96C34 613 aa13.75□□□□□ -0.21
CALD1-211ENST00000445569 COG3Q96JB2 828 aa13.75□□□□□ -0.21
CALD1-211ENST00000445569 PNNQ9H307 717 aaKnown RBP13.75□□□□□ -0.21
CALD1-211ENST00000445569 OVOS2A0A0J9YW53 1432 aa13.74□□□□□ -0.21
CALD1-211ENST00000445569 OVOS2Q6IE36 1432 aa13.74□□□□□ -0.21
CALD1-211ENST00000445569 RGPD8O14715 1765 aaPredicted RBP13.74□□□□□ -0.21
CALD1-211ENST00000445569 HSPA1LP34931 641 aa13.74□□□□□ -0.21
CALD1-211ENST00000445569 GOLGA2Q08379 1002 aa13.74□□□□□ -0.21
CALD1-211ENST00000445569 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.74□□□□□ -0.21
CALD1-211ENST00000445569 ACEP12821 1306 aa13.73□□□□□ -0.21
CALD1-211ENST00000445569 CCDC146Q8IYE0 955 aa13.73□□□□□ -0.21
CALD1-211ENST00000445569 RCAN3Q9UKA8 241 aa13.73□□□□□ -0.21
CALD1-211ENST00000445569 APAF1O14727 1248 aa13.72□□□□□ -0.21
CALD1-211ENST00000445569 SALL2Q9Y467 1007 aaPredicted RBP13.72□□□□□ -0.21
CALD1-211ENST00000445569 KIF1AQ12756 1690 aa13.72□□□□□ -0.21
CALD1-211ENST00000445569 SSH2Q76I76 1423 aa13.72□□□□□ -0.21
CALD1-211ENST00000445569 TTC21BQ7Z4L5 1316 aa13.71□□□□□ -0.21
CALD1-211ENST00000445569 MAPK8IP3Q9UPT6 1336 aa13.71□□□□□ -0.21
CALD1-211ENST00000445569 E9PSI1 815 aa13.71□□□□□ -0.21
CALD1-211ENST00000445569 DIAPH1O60610 1272 aaKnown RBP13.71□□□□□ -0.21
CALD1-211ENST00000445569 U2AF1L5P0DN76 240 aaPredicted RBP13.71□□□□□ -0.21
CALD1-211ENST00000445569 U2AF1Q01081 240 aaKnown RBP eCLIP13.71□□□□□ -0.21
CALD1-211ENST00000445569 PROSER2Q86WR7 435 aaPredicted RBP13.71□□□□□ -0.21
CALD1-211ENST00000445569 PIK3C2AO00443 1686 aa13.71□□□□□ -0.21
CALD1-211ENST00000445569 TMEM94Q12767 1356 aa13.71□□□□□ -0.22
CALD1-211ENST00000445569 CCDC27Q2M243 656 aa13.7□□□□□ -0.22
CALD1-211ENST00000445569 NME9Q86XW9 330 aa13.7□□□□□ -0.22
CALD1-211ENST00000445569 PPP4R2Q9NY27 417 aa13.7□□□□□ -0.22
CALD1-211ENST00000445569 RRP1P56182 461 aaKnown RBP13.69□□□□□ -0.22
CALD1-211ENST00000445569 USP31Q70CQ4 1352 aa13.69□□□□□ -0.22
CALD1-211ENST00000445569 NEFMP07197 916 aa13.68□□□□□ -0.22
CALD1-211ENST00000445569 NCOA3Q9Y6Q9 1424 aa13.67□□□□□ -0.22
CALD1-211ENST00000445569 SENP3-EIF4A1A0A087X0R7 540 aa13.67□□□□□ -0.22
CALD1-211ENST00000445569 U2SURPO15042 1029 aaKnown RBP13.67□□□□□ -0.22
CALD1-211ENST00000445569 SLFN5Q08AF3 891 aa13.67□□□□□ -0.22
CALD1-211ENST00000445569 NGDNQ8NEJ9 315 aaKnown RBP13.67□□□□□ -0.22
CALD1-211ENST00000445569 RBM33Q96EV2 1170 aaKnown RBP13.67□□□□□ -0.22
CALD1-211ENST00000445569 CDCA7LQ96GN5 454 aa13.67□□□□□ -0.22
CALD1-211ENST00000445569 POLKQ9UBT6 870 aa13.67□□□□□ -0.22
CALD1-211ENST00000445569 DCCP43146 1447 aa13.66□□□□□ -0.22
CALD1-211ENST00000445569 DUSP27Q5VZP5 1158 aa13.66□□□□□ -0.22
CALD1-211ENST00000445569 WDR63Q8IWG1 891 aa13.66□□□□□ -0.22
CALD1-211ENST00000445569 TCP11L2Q8N4U5 519 aa13.66□□□□□ -0.22
CALD1-211ENST00000445569 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.66□□□□□ -0.22
CALD1-211ENST00000445569 KIF24Q5T7B8 1368 aa13.66□□□□□ -0.22
CALD1-211ENST00000445569 MARF1Q9Y4F3 1742 aaKnown RBP13.65□□□□□ -0.22
CALD1-211ENST00000445569 FCHSD2O94868 740 aa13.64□□□□□ -0.23
CALD1-211ENST00000445569 IRX6P78412 446 aaPredicted RBP13.64□□□□□ -0.23
CALD1-211ENST00000445569 WWC1Q8IX03 1113 aa13.64□□□□□ -0.23
CALD1-211ENST00000445569 TRMT2AQ8IZ69 625 aaKnown RBP13.64□□□□□ -0.23
CALD1-211ENST00000445569 RGPD1P0DJD0 1748 aa13.64□□□□□ -0.23
CALD1-211ENST00000445569 PEAK1Q9H792 1746 aa13.64□□□□□ -0.23
CALD1-211ENST00000445569 NUTM2FA1L443 756 aa13.63□□□□□ -0.23
CALD1-211ENST00000445569 ILDR2Q71H61 639 aa13.63□□□□□ -0.23
CALD1-211ENST00000445569 SBNO1A3KN83 1393 aa13.62□□□□□ -0.23
CALD1-211ENST00000445569 RTL1A6NKG5 1358 aa13.62□□□□□ -0.23
CALD1-211ENST00000445569 FLT4P35916 1363 aa13.62□□□□□ -0.23
CALD1-211ENST00000445569 PHRF1Q9P1Y6 1649 aaKnown RBP13.62□□□□□ -0.23
CALD1-211ENST00000445569 PPM1GO15355 546 aaPredicted RBP13.62□□□□□ -0.23
CALD1-211ENST00000445569 C14orf37Q86TY3 774 aa13.62□□□□□ -0.23
CALD1-211ENST00000445569 MYH16Q9H6N6 1097 aa13.62□□□□□ -0.23
CALD1-211ENST00000445569 PHF8Q9UPP1 1060 aa13.62□□□□□ -0.23
CALD1-211ENST00000445569 EMILIN1Q9Y6C2 1016 aa13.62□□□□□ -0.23
CALD1-211ENST00000445569 STRCP1A6NGW2 1772 aa13.62□□□□□ -0.23
CALD1-211ENST00000445569 IL16Q14005 1332 aa13.62□□□□□ -0.23
CALD1-211ENST00000445569 PMFBP1Q8TBY8 1022 aa13.61□□□□□ -0.23
CALD1-211ENST00000445569 PLEKHF1Q96S99 279 aa13.61□□□□□ -0.23
CALD1-211ENST00000445569 MSH6P52701 1360 aa13.6□□□□□ -0.23
CALD1-211ENST00000445569 CALD1Q05682 793 aaKnown RBP13.6□□□□□ -0.23
CALD1-211ENST00000445569 LMOD3Q0VAK6 560 aa13.6□□□□□ -0.23
CALD1-211ENST00000445569 RSPH6AQ9H0K4 717 aa13.6□□□□□ -0.23
CALD1-211ENST00000445569 SLAIN2Q9P270 581 aa13.6□□□□□ -0.23
CALD1-211ENST00000445569 ARHGEF10O15013 1369 aa13.59□□□□□ -0.23
CALD1-211ENST00000445569 CT47B1P0C2W7 299 aaPredicted RBP13.59□□□□□ -0.23
CALD1-211ENST00000445569 IL13P35225 146 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms