RNA–Protein interactions for RNA: ENST00000445506.6

MSR1-205, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 1 (best) BASIC

Gene MSR1, Length 1,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-205ENST00000445506 ZNF142P52746 1687 aaPredicted RBP16.55■□□□□ 0.24
MSR1-205ENST00000445506 E9PSI1 815 aa16.55■□□□□ 0.24
MSR1-205ENST00000445506 APAF1O14727 1248 aa16.55■□□□□ 0.24
MSR1-205ENST00000445506 ROBO2Q9HCK4 1378 aa16.54■□□□□ 0.24
MSR1-205ENST00000445506 COL3A1P02461 1466 aaPredicted RBP16.54■□□□□ 0.24
MSR1-205ENST00000445506 NUDT16Q96DE0 195 aaKnown RBP16.54■□□□□ 0.24
MSR1-205ENST00000445506 PNNQ9H307 717 aaKnown RBP16.54■□□□□ 0.24
MSR1-205ENST00000445506 ITSN1Q15811 1721 aa16.53■□□□□ 0.24
MSR1-205ENST00000445506 TOPAZ1Q8N9V7 1692 aa16.53■□□□□ 0.24
MSR1-205ENST00000445506 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.52■□□□□ 0.24
MSR1-205ENST00000445506 AATKQ6ZMQ8 1374 aa16.52■□□□□ 0.24
MSR1-205ENST00000445506 CERKQ8TCT0 537 aa16.52■□□□□ 0.24
MSR1-205ENST00000445506 GGNBP2Q9H3C7 697 aa16.52■□□□□ 0.24
MSR1-205ENST00000445506 WDR63Q8IWG1 891 aa16.51■□□□□ 0.23
MSR1-205ENST00000445506 XRN1Q8IZH2 1706 aaKnown RBP16.51■□□□□ 0.23
MSR1-205ENST00000445506 PTPRUQ92729 1446 aa16.51■□□□□ 0.23
MSR1-205ENST00000445506 PLEKHG3A1L390 1219 aa16.5■□□□□ 0.23
MSR1-205ENST00000445506 TNNT2P45379 298 aaPredicted RBP16.5■□□□□ 0.23
MSR1-205ENST00000445506 CCDC146Q8IYE0 955 aa16.5■□□□□ 0.23
MSR1-205ENST00000445506 NKTRP30414 1462 aaKnown RBP16.5■□□□□ 0.23
MSR1-205ENST00000445506 SENP3-EIF4A1A0A087X0R7 540 aa16.49■□□□□ 0.23
MSR1-205ENST00000445506 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.49■□□□□ 0.23
MSR1-205ENST00000445506 TSHZ2Q9NRE2 1034 aa16.49■□□□□ 0.23
MSR1-205ENST00000445506 STRCQ7RTU9 1775 aa16.49■□□□□ 0.23
MSR1-205ENST00000445506 WWC1Q8IX03 1113 aa16.48■□□□□ 0.23
MSR1-205ENST00000445506 AMOTL2Q9Y2J4 779 aa16.48■□□□□ 0.23
MSR1-205ENST00000445506 TCP11L2Q8N4U5 519 aa16.47■□□□□ 0.23
MSR1-205ENST00000445506 DIAPH1O60610 1272 aaKnown RBP16.46■□□□□ 0.23
MSR1-205ENST00000445506 NRKQ7Z2Y5 1582 aa16.46■□□□□ 0.23
MSR1-205ENST00000445506 PRR36Q9H6K5 1346 aa16.45■□□□□ 0.22
MSR1-205ENST00000445506 CDK12Q9NYV4 1490 aaPredicted RBP16.45■□□□□ 0.22
MSR1-205ENST00000445506 U2AF1L5P0DN76 240 aaPredicted RBP16.45■□□□□ 0.22
MSR1-205ENST00000445506 U2AF1Q01081 240 aaKnown RBP eCLIP16.45■□□□□ 0.22
MSR1-205ENST00000445506 SLC26A8Q96RN1 970 aa16.45■□□□□ 0.22
MSR1-205ENST00000445506 ANKARQ7Z5J8 1434 aa16.44■□□□□ 0.22
MSR1-205ENST00000445506 CCDC136Q96JN2 1154 aa16.44■□□□□ 0.22
MSR1-205ENST00000445506 FCHSD2O94868 740 aa16.43■□□□□ 0.22
MSR1-205ENST00000445506 B4GALNT3Q6L9W6 998 aa16.43■□□□□ 0.22
MSR1-205ENST00000445506 ANKLE2Q86XL3 938 aa16.43■□□□□ 0.22
MSR1-205ENST00000445506 COG3Q96JB2 828 aa16.43■□□□□ 0.22
MSR1-205ENST00000445506 PLEKHF1Q96S99 279 aa16.43■□□□□ 0.22
MSR1-205ENST00000445506 POLKQ9UBT6 870 aa16.43■□□□□ 0.22
MSR1-205ENST00000445506 MAP2P11137 1827 aaKnown RBP16.42■□□□□ 0.22
MSR1-205ENST00000445506 IL16Q14005 1332 aa16.41■□□□□ 0.22
MSR1-205ENST00000445506 TTC21AQ8NDW8 1320 aa16.41■□□□□ 0.22
MSR1-205ENST00000445506 CT47B1P0C2W7 299 aaPredicted RBP16.41■□□□□ 0.22
MSR1-205ENST00000445506 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.41■□□□□ 0.22
MSR1-205ENST00000445506 CHD2O14647 1828 aaKnown RBP16.41■□□□□ 0.22
MSR1-205ENST00000445506 USP6P35125 1406 aa16.4■□□□□ 0.22
MSR1-205ENST00000445506 SSH2Q76I76 1423 aa16.4■□□□□ 0.22
MSR1-205ENST00000445506 TTC21BQ7Z4L5 1316 aa16.4■□□□□ 0.22
MSR1-205ENST00000445506 MYH16Q9H6N6 1097 aa16.4■□□□□ 0.22
MSR1-205ENST00000445506 NALCNQ8IZF0 1738 aa16.39■□□□□ 0.21
MSR1-205ENST00000445506 ACEP12821 1306 aa16.39■□□□□ 0.21
MSR1-205ENST00000445506 MAPK8IP3Q9UPT6 1336 aa16.39■□□□□ 0.21
MSR1-205ENST00000445506 SPINK5Q9NQ38 1064 aaPredicted RBP16.39■□□□□ 0.21
MSR1-205ENST00000445506 OVOS2A0A0J9YW53 1432 aa16.38■□□□□ 0.21
MSR1-205ENST00000445506 OVOS2Q6IE36 1432 aa16.38■□□□□ 0.21
MSR1-205ENST00000445506 NME9Q86XW9 330 aa16.38■□□□□ 0.21
MSR1-205ENST00000445506 EXOC6Q8TAG9 804 aa16.38■□□□□ 0.21
MSR1-205ENST00000445506 LRRC7Q96NW7 1537 aa16.38■□□□□ 0.21
MSR1-205ENST00000445506 USP31Q70CQ4 1352 aa16.37■□□□□ 0.21
MSR1-205ENST00000445506 U2SURPO15042 1029 aaKnown RBP16.37■□□□□ 0.21
MSR1-205ENST00000445506 TMPOP42166 694 aaKnown RBP16.37■□□□□ 0.21
MSR1-205ENST00000445506 FMN2Q9NZ56 1722 aa16.37■□□□□ 0.21
MSR1-205ENST00000445506 NEFMP07197 916 aa16.36■□□□□ 0.21
MSR1-205ENST00000445506 USP54Q70EL1 1684 aa16.35■□□□□ 0.21
MSR1-205ENST00000445506 IL13P35225 146 aa16.35■□□□□ 0.21
MSR1-205ENST00000445506 AAMPQ13685 434 aa16.35■□□□□ 0.21
MSR1-205ENST00000445506 PDE3AQ14432 1141 aa16.35■□□□□ 0.21
MSR1-205ENST00000445506 RSPH6AQ9H0K4 717 aa16.34■□□□□ 0.21
MSR1-205ENST00000445506 NCKAP5LQ9HCH0 1330 aa16.33■□□□□ 0.2
MSR1-205ENST00000445506 KCNA6P17658 529 aa16.32■□□□□ 0.2
MSR1-205ENST00000445506 CRBNQ96SW2 442 aa16.32■□□□□ 0.2
MSR1-205ENST00000445506 RRP7AQ9Y3A4 280 aaKnown RBP16.32■□□□□ 0.2
MSR1-205ENST00000445506 NPHP4O75161 1426 aaPredicted RBP16.32■□□□□ 0.2
MSR1-205ENST00000445506 PLIN1O60240 522 aa16.31■□□□□ 0.2
MSR1-205ENST00000445506 CALD1Q05682 793 aaKnown RBP16.31■□□□□ 0.2
MSR1-205ENST00000445506 NEUROD2Q15784 382 aa16.31■□□□□ 0.2
MSR1-205ENST00000445506 TRIM35Q9UPQ4 493 aa16.31■□□□□ 0.2
MSR1-205ENST00000445506 KIF24Q5T7B8 1368 aa16.31■□□□□ 0.2
MSR1-205ENST00000445506 EMILIN1Q9Y6C2 1016 aa16.3■□□□□ 0.2
MSR1-205ENST00000445506 NWD1Q149M9 1564 aa16.3■□□□□ 0.2
MSR1-205ENST00000445506 LTBP4Q8N2S1 1624 aa16.29■□□□□ 0.2
MSR1-205ENST00000445506 RGPD8O14715 1765 aaPredicted RBP16.29■□□□□ 0.2
MSR1-205ENST00000445506 RARSP54136 660 aaKnown RBP16.29■□□□□ 0.2
MSR1-205ENST00000445506 RIPK4P57078 832 aa16.29■□□□□ 0.2
MSR1-205ENST00000445506 LMOD3Q0VAK6 560 aa16.29■□□□□ 0.2
MSR1-205ENST00000445506 RBM19Q9Y4C8 960 aaKnown RBP16.29■□□□□ 0.2
MSR1-205ENST00000445506 NFE2L2Q16236 605 aa16.28■□□□□ 0.2
MSR1-205ENST00000445506 NGDNQ8NEJ9 315 aaKnown RBP16.28■□□□□ 0.2
MSR1-205ENST00000445506 ZNF428Q96B54 188 aa16.28■□□□□ 0.2
MSR1-205ENST00000445506 ZRANB1Q9UGI0 708 aa16.28■□□□□ 0.2
MSR1-205ENST00000445506 ADGRL3Q9HAR2 1447 aa16.28■□□□□ 0.2
MSR1-205ENST00000445506 MS4A1P11836 297 aa16.27■□□□□ 0.2
MSR1-205ENST00000445506 PRKAR2BP31323 418 aa16.27■□□□□ 0.2
MSR1-205ENST00000445506 PPM1GO15355 546 aaPredicted RBP16.26■□□□□ 0.19
MSR1-205ENST00000445506 TCERG1O14776 1098 aaKnown RBP16.25■□□□□ 0.19
MSR1-205ENST00000445506 BCAR3O75815 825 aa16.25■□□□□ 0.19
MSR1-205ENST00000445506 RGPD1P0DJD0 1748 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms