RNA–Protein interactions for RNA: ENST00000445368.1

PUDPP3-201, Transcript of pseudouridine 5'-phosphatase pseudogene 3, humanhuman

BASIC

Gene PUDPP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPP3-201ENST00000445368 KIF1AQ12756 1690 aa20.6■□□□□ 0.89
PUDPP3-201ENST00000445368 CABP1Q9NZU7 370 aa20.59■□□□□ 0.89
PUDPP3-201ENST00000445368 USP32Q8NFA0 1604 aa20.57■□□□□ 0.88
PUDPP3-201ENST00000445368 PAK3O75914 559 aaPredicted RBP20.57■□□□□ 0.88
PUDPP3-201ENST00000445368 QTRT2Q9H974 415 aaKnown RBP20.57■□□□□ 0.88
PUDPP3-201ENST00000445368 RXRBP28702 533 aa20.56■□□□□ 0.88
PUDPP3-201ENST00000445368 HAP1P54257 671 aaPredicted RBP20.56■□□□□ 0.88
PUDPP3-201ENST00000445368 CABLES1Q8TDN4 633 aa20.55■□□□□ 0.88
PUDPP3-201ENST00000445368 USP21Q9UK80 565 aa20.55■□□□□ 0.88
PUDPP3-201ENST00000445368 BRD4O60885 1362 aaPredicted RBP20.55■□□□□ 0.88
PUDPP3-201ENST00000445368 POLR3GLQ9BT43 218 aa20.54■□□□□ 0.88
PUDPP3-201ENST00000445368 ZNF692Q9BU19 519 aaPredicted RBP20.54■□□□□ 0.88
PUDPP3-201ENST00000445368 ATAD2Q6PL18 1390 aa20.54■□□□□ 0.88
PUDPP3-201ENST00000445368 PPIP5K1Q6PFW1 1433 aa20.53■□□□□ 0.88
PUDPP3-201ENST00000445368 COL22A1Q8NFW1 1626 aaPredicted RBP20.53■□□□□ 0.88
PUDPP3-201ENST00000445368 RBM6P78332 1123 aaKnown RBP20.52■□□□□ 0.88
PUDPP3-201ENST00000445368 TRPC5Q9UL62 973 aaPredicted RBP20.52■□□□□ 0.88
PUDPP3-201ENST00000445368 NINLQ9Y2I6 1382 aa20.5■□□□□ 0.87
PUDPP3-201ENST00000445368 FAM83GA6ND36 823 aa20.49■□□□□ 0.87
PUDPP3-201ENST00000445368 UNC5CLQ8IV45 518 aa20.49■□□□□ 0.87
PUDPP3-201ENST00000445368 ABTB2Q8N961 1025 aa20.49■□□□□ 0.87
PUDPP3-201ENST00000445368 MYOM1P52179 1685 aa20.48■□□□□ 0.87
PUDPP3-201ENST00000445368 PLEKHG5O94827 1062 aa20.47■□□□□ 0.87
PUDPP3-201ENST00000445368 NLRP13Q86W25 1043 aa20.47■□□□□ 0.87
PUDPP3-201ENST00000445368 BCL9LQ86UU0 1499 aa20.47■□□□□ 0.87
PUDPP3-201ENST00000445368 DDX10Q13206 875 aaKnown RBP20.46■□□□□ 0.87
PUDPP3-201ENST00000445368 TOPAZ1Q8N9V7 1692 aa20.45■□□□□ 0.86
PUDPP3-201ENST00000445368 USP6P35125 1406 aa20.44■□□□□ 0.86
PUDPP3-201ENST00000445368 ITSN1Q15811 1721 aa20.44■□□□□ 0.86
PUDPP3-201ENST00000445368 SLIT2O94813 1529 aa20.44■□□□□ 0.86
PUDPP3-201ENST00000445368 NUTM2GQ5VZR2 741 aa20.44■□□□□ 0.86
PUDPP3-201ENST00000445368 TMC1Q8TDI8 760 aa20.44■□□□□ 0.86
PUDPP3-201ENST00000445368 ATRNO75882 1429 aa20.44■□□□□ 0.86
PUDPP3-201ENST00000445368 SSH2Q76I76 1423 aa20.44■□□□□ 0.86
PUDPP3-201ENST00000445368 GJD4Q96KN9 370 aaPredicted RBP20.43■□□□□ 0.86
PUDPP3-201ENST00000445368 SLC12A5Q9H2X9 1139 aa20.43■□□□□ 0.86
PUDPP3-201ENST00000445368 CPSF1Q10570 1443 aaKnown RBP20.43■□□□□ 0.86
PUDPP3-201ENST00000445368 CDK12Q9NYV4 1490 aaPredicted RBP20.43■□□□□ 0.86
PUDPP3-201ENST00000445368 USP19O94966 1318 aa20.42■□□□□ 0.86
PUDPP3-201ENST00000445368 TTC21BQ7Z4L5 1316 aa20.42■□□□□ 0.86
PUDPP3-201ENST00000445368 RGPD8O14715 1765 aaPredicted RBP20.41■□□□□ 0.86
PUDPP3-201ENST00000445368 GCP02774 474 aa20.41■□□□□ 0.86
PUDPP3-201ENST00000445368 VPS72Q15906 364 aa20.41■□□□□ 0.86
PUDPP3-201ENST00000445368 TTC21AQ8NDW8 1320 aa20.41■□□□□ 0.86
PUDPP3-201ENST00000445368 NLRP6P59044 892 aa20.4■□□□□ 0.86
PUDPP3-201ENST00000445368 HDGFL2Q7Z4V5 671 aaPredicted RBP20.4■□□□□ 0.86
PUDPP3-201ENST00000445368 PRDM11Q9NQV5 511 aa20.4■□□□□ 0.86
PUDPP3-201ENST00000445368 TERF2IPQ9NYB0 399 aa20.4■□□□□ 0.86
PUDPP3-201ENST00000445368 TRPM3Q9HCF6 1732 aaPredicted RBP20.39■□□□□ 0.86
PUDPP3-201ENST00000445368 ANKRD36BQ8N2N9 1353 aa20.39■□□□□ 0.85
PUDPP3-201ENST00000445368 PANK3Q9H999 370 aa20.38■□□□□ 0.85
PUDPP3-201ENST00000445368 BTG4Q9NY30 223 aa20.38■□□□□ 0.85
PUDPP3-201ENST00000445368 KTN1Q86UP2 1357 aaKnown RBP20.37■□□□□ 0.85
PUDPP3-201ENST00000445368 ZC3H6P61129 1189 aaKnown RBP20.37■□□□□ 0.85
PUDPP3-201ENST00000445368 KIAA0232Q92628 1395 aa20.36■□□□□ 0.85
PUDPP3-201ENST00000445368 CD163L1Q9NR16 1453 aa20.36■□□□□ 0.85
PUDPP3-201ENST00000445368 A0A1W2PP64 1363 aa20.35■□□□□ 0.85
PUDPP3-201ENST00000445368 CPDO75976 1380 aa20.35■□□□□ 0.85
PUDPP3-201ENST00000445368 ONECUT3O60422 494 aaPredicted RBP20.35■□□□□ 0.85
PUDPP3-201ENST00000445368 ALS2Q96Q42 1657 aa20.35■□□□□ 0.85
PUDPP3-201ENST00000445368 DIEXFQ68CQ4 756 aaKnown RBP20.34■□□□□ 0.85
PUDPP3-201ENST00000445368 CHRNA2Q15822 529 aa20.33■□□□□ 0.85
PUDPP3-201ENST00000445368 KCNH5Q8NCM2 988 aa20.33■□□□□ 0.85
PUDPP3-201ENST00000445368 AKAP12Q02952 1782 aa20.32■□□□□ 0.84
PUDPP3-201ENST00000445368 RGS12O14924 1447 aa20.31■□□□□ 0.84
PUDPP3-201ENST00000445368 PER1O15534 1290 aaPredicted RBP20.31■□□□□ 0.84
PUDPP3-201ENST00000445368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.31■□□□□ 0.84
PUDPP3-201ENST00000445368 CCDC9Q9Y3X0 531 aaKnown RBP20.31■□□□□ 0.84
PUDPP3-201ENST00000445368 KNSTRNQ9Y448 316 aa20.31■□□□□ 0.84
PUDPP3-201ENST00000445368 USP31Q70CQ4 1352 aa20.31■□□□□ 0.84
PUDPP3-201ENST00000445368 MON2Q7Z3U7 1717 aa20.3■□□□□ 0.84
PUDPP3-201ENST00000445368 NSD3Q9BZ95 1437 aa20.3■□□□□ 0.84
PUDPP3-201ENST00000445368 CARD14Q9BXL6 1004 aa20.3■□□□□ 0.84
PUDPP3-201ENST00000445368 EDC4Q6P2E9 1401 aaKnown RBP20.29■□□□□ 0.84
PUDPP3-201ENST00000445368 EVA1CP58658 441 aa20.29■□□□□ 0.84
PUDPP3-201ENST00000445368 ARHGEF25Q86VW2 580 aa20.28■□□□□ 0.84
PUDPP3-201ENST00000445368 SPATA31A5Q5VU36 1347 aa20.27■□□□□ 0.84
PUDPP3-201ENST00000445368 SPATA31A7Q8IWB4 1347 aa20.27■□□□□ 0.84
PUDPP3-201ENST00000445368 AATKQ6ZMQ8 1374 aa20.27■□□□□ 0.84
PUDPP3-201ENST00000445368 NME9Q86XW9 330 aa20.27■□□□□ 0.84
PUDPP3-201ENST00000445368 SEPT12Q8IYM1 358 aa20.27■□□□□ 0.84
PUDPP3-201ENST00000445368 UPF1Q92900 1129 aaKnown RBP eCLIP20.27■□□□□ 0.84
PUDPP3-201ENST00000445368 CGNL1Q0VF96 1302 aa20.26■□□□□ 0.83
PUDPP3-201ENST00000445368 NRKQ7Z2Y5 1582 aa20.25■□□□□ 0.83
PUDPP3-201ENST00000445368 NPC1L1Q9UHC9 1359 aa20.25■□□□□ 0.83
PUDPP3-201ENST00000445368 STRN4Q9NRL3 753 aa20.25■□□□□ 0.83
PUDPP3-201ENST00000445368 ZRANB1Q9UGI0 708 aa20.25■□□□□ 0.83
PUDPP3-201ENST00000445368 SPATA31A1Q5TZJ5 1347 aa20.24■□□□□ 0.83
PUDPP3-201ENST00000445368 NSD2O96028 1365 aa20.23■□□□□ 0.83
PUDPP3-201ENST00000445368 SLIT3O75094 1523 aa20.23■□□□□ 0.83
PUDPP3-201ENST00000445368 AMER1Q5JTC6 1135 aaPredicted RBP20.23■□□□□ 0.83
PUDPP3-201ENST00000445368 FAM98CQ17RN3 349 aaKnown RBP20.22■□□□□ 0.83
PUDPP3-201ENST00000445368 ANP32CO43423 234 aa20.21■□□□□ 0.83
PUDPP3-201ENST00000445368 LARP1Q6PKG0 1096 aaKnown RBP20.21■□□□□ 0.83
PUDPP3-201ENST00000445368 COL14A1Q05707 1796 aaKnown RBP20.21■□□□□ 0.83
PUDPP3-201ENST00000445368 SOX12O15370 315 aa20.2■□□□□ 0.82
PUDPP3-201ENST00000445368 BARGINQ6ZT62 677 aa20.2■□□□□ 0.82
PUDPP3-201ENST00000445368 AXIN2Q9Y2T1 843 aa20.2■□□□□ 0.82
PUDPP3-201ENST00000445368 THRAP3Q9Y2W1 955 aaKnown RBP20.2■□□□□ 0.82
PUDPP3-201ENST00000445368 KIF20BQ96Q89 1820 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms