RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 TRPM3Q9HCF6 1732 aaPredicted RBP33.79■■■■□ 3
C9orf3-207ENST00000445181 PAK3O75914 559 aaPredicted RBP33.77■■■■□ 3
C9orf3-207ENST00000445181 UNC5CLQ8IV45 518 aa33.77■■■■□ 3
C9orf3-207ENST00000445181 SLIT2O94813 1529 aa33.76■■■■□ 3
C9orf3-207ENST00000445181 SBNO2Q9Y2G9 1366 aa33.75■■■□□ 2.99
C9orf3-207ENST00000445181 TOPAZ1Q8N9V7 1692 aa33.74■■■□□ 2.99
C9orf3-207ENST00000445181 ST20-MTHFSA0A0A6YYL1 179 aa33.74■■■□□ 2.99
C9orf3-207ENST00000445181 GJD4Q96KN9 370 aaPredicted RBP33.74■■■□□ 2.99
C9orf3-207ENST00000445181 USP47Q96K76 1375 aa33.73■■■□□ 2.99
C9orf3-207ENST00000445181 PPIP5K1Q6PFW1 1433 aa33.72■■■□□ 2.99
C9orf3-207ENST00000445181 ALS2Q96Q42 1657 aa33.72■■■□□ 2.99
C9orf3-207ENST00000445181 ABCA3Q99758 1704 aa33.71■■■□□ 2.99
C9orf3-207ENST00000445181 PLEKHG3A1L390 1219 aa33.7■■■□□ 2.99
C9orf3-207ENST00000445181 ACEP12821 1306 aa33.7■■■□□ 2.99
C9orf3-207ENST00000445181 FAM83GA6ND36 823 aa33.69■■■□□ 2.98
C9orf3-207ENST00000445181 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.69■■■□□ 2.98
C9orf3-207ENST00000445181 POLR3AO14802 1390 aaPredicted RBP33.68■■■□□ 2.98
C9orf3-207ENST00000445181 CABP1Q9NZU7 370 aa33.67■■■□□ 2.98
C9orf3-207ENST00000445181 ATAD2Q6PL18 1390 aa33.64■■■□□ 2.98
C9orf3-207ENST00000445181 SLC24A1O60721 1099 aa33.64■■■□□ 2.98
C9orf3-207ENST00000445181 TESK2Q96S53 571 aa33.63■■■□□ 2.97
C9orf3-207ENST00000445181 VPS72Q15906 364 aa33.62■■■□□ 2.97
C9orf3-207ENST00000445181 PLCH1Q4KWH8 1693 aa33.61■■■□□ 2.97
C9orf3-207ENST00000445181 NWD2Q9ULI1 1742 aa33.6■■■□□ 2.97
C9orf3-207ENST00000445181 CCDC9Q9Y3X0 531 aaKnown RBP33.6■■■□□ 2.97
C9orf3-207ENST00000445181 NUTM2GQ5VZR2 741 aa33.59■■■□□ 2.97
C9orf3-207ENST00000445181 GLI3P10071 1580 aa33.59■■■□□ 2.97
C9orf3-207ENST00000445181 BTG4Q9NY30 223 aa33.57■■■□□ 2.96
C9orf3-207ENST00000445181 TMF1P82094 1093 aa33.56■■■□□ 2.96
C9orf3-207ENST00000445181 TMC1Q8TDI8 760 aa33.55■■■□□ 2.96
C9orf3-207ENST00000445181 CRYBG1Q9Y4K1 1723 aa33.55■■■□□ 2.96
C9orf3-207ENST00000445181 ABTB2Q8N961 1025 aa33.54■■■□□ 2.96
C9orf3-207ENST00000445181 PRDM11Q9NQV5 511 aa33.54■■■□□ 2.96
C9orf3-207ENST00000445181 COL14A1Q05707 1796 aaKnown RBP33.53■■■□□ 2.96
C9orf3-207ENST00000445181 PUS7Q96PZ0 661 aaKnown RBP33.52■■■□□ 2.96
C9orf3-207ENST00000445181 EIF4G2P78344 907 aaKnown RBP eCLIP33.51■■■□□ 2.95
C9orf3-207ENST00000445181 ZNF692Q9BU19 519 aaPredicted RBP33.5■■■□□ 2.95
C9orf3-207ENST00000445181 USP6P35125 1406 aa33.49■■■□□ 2.95
C9orf3-207ENST00000445181 SEPT12Q8IYM1 358 aa33.49■■■□□ 2.95
C9orf3-207ENST00000445181 KIAA0232Q92628 1395 aa33.48■■■□□ 2.95
C9orf3-207ENST00000445181 ZC3H6P61129 1189 aaKnown RBP33.48■■■□□ 2.95
C9orf3-207ENST00000445181 BRD4O60885 1362 aaPredicted RBP33.47■■■□□ 2.95
C9orf3-207ENST00000445181 ONECUT3O60422 494 aaPredicted RBP33.47■■■□□ 2.95
C9orf3-207ENST00000445181 NRAPQ86VF7 1730 aa33.47■■■□□ 2.95
C9orf3-207ENST00000445181 CHRNA2Q15822 529 aa33.46■■■□□ 2.95
C9orf3-207ENST00000445181 CDCA8Q53HL2 280 aa33.46■■■□□ 2.95
C9orf3-207ENST00000445181 PHRF1Q9P1Y6 1649 aaKnown RBP33.46■■■□□ 2.95
C9orf3-207ENST00000445181 NLRP13Q86W25 1043 aa33.45■■■□□ 2.95
C9orf3-207ENST00000445181 SLC12A5Q9H2X9 1139 aa33.45■■■□□ 2.95
C9orf3-207ENST00000445181 HSPA5P11021 654 aaKnown RBP33.44■■■□□ 2.94
C9orf3-207ENST00000445181 KTN1Q86UP2 1357 aaKnown RBP33.44■■■□□ 2.94
C9orf3-207ENST00000445181 AKAP12Q02952 1782 aa33.43■■■□□ 2.94
C9orf3-207ENST00000445181 HDGFL2Q7Z4V5 671 aaPredicted RBP33.43■■■□□ 2.94
C9orf3-207ENST00000445181 CPSF1Q10570 1443 aaKnown RBP33.42■■■□□ 2.94
C9orf3-207ENST00000445181 FAM98CQ17RN3 349 aaKnown RBP33.41■■■□□ 2.94
C9orf3-207ENST00000445181 TERF2IPQ9NYB0 399 aa33.41■■■□□ 2.94
C9orf3-207ENST00000445181 USP19O94966 1318 aa33.41■■■□□ 2.94
C9orf3-207ENST00000445181 NINLQ9Y2I6 1382 aa33.4■■■□□ 2.94
C9orf3-207ENST00000445181 A0A0G2JS52 829 aa33.4■■■□□ 2.94
C9orf3-207ENST00000445181 MYT1Q01538 1121 aa33.4■■■□□ 2.94
C9orf3-207ENST00000445181 SPATA31A5Q5VU36 1347 aa33.39■■■□□ 2.94
C9orf3-207ENST00000445181 SPATA31A7Q8IWB4 1347 aa33.39■■■□□ 2.94
C9orf3-207ENST00000445181 BRWD3Q6RI45 1802 aa33.38■■■□□ 2.93
C9orf3-207ENST00000445181 CCDC125Q86Z20 511 aa33.38■■■□□ 2.93
C9orf3-207ENST00000445181 TTC21BQ7Z4L5 1316 aa33.37■■■□□ 2.93
C9orf3-207ENST00000445181 GCP02774 474 aa33.37■■■□□ 2.93
C9orf3-207ENST00000445181 NLRP6P59044 892 aa33.37■■■□□ 2.93
C9orf3-207ENST00000445181 STRN4Q9NRL3 753 aa33.37■■■□□ 2.93
C9orf3-207ENST00000445181 SSH2Q76I76 1423 aa33.36■■■□□ 2.93
C9orf3-207ENST00000445181 NRKQ7Z2Y5 1582 aa33.36■■■□□ 2.93
C9orf3-207ENST00000445181 KRT27Q7Z3Y8 459 aa33.36■■■□□ 2.93
C9orf3-207ENST00000445181 CD163L1Q9NR16 1453 aa33.36■■■□□ 2.93
C9orf3-207ENST00000445181 CPDO75976 1380 aa33.34■■■□□ 2.93
C9orf3-207ENST00000445181 MON2Q7Z3U7 1717 aa33.34■■■□□ 2.93
C9orf3-207ENST00000445181 A0A1W2PP64 1363 aa33.34■■■□□ 2.93
C9orf3-207ENST00000445181 TTC21AQ8NDW8 1320 aa33.33■■■□□ 2.93
C9orf3-207ENST00000445181 EVA1CP58658 441 aa33.33■■■□□ 2.93
C9orf3-207ENST00000445181 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.33■■■□□ 2.932e-6■□□□□ 9.3
C9orf3-207ENST00000445181 POLR3GLQ9BT43 218 aa33.32■■■□□ 2.92
C9orf3-207ENST00000445181 SPATA31A1Q5TZJ5 1347 aa33.3■■■□□ 2.92
C9orf3-207ENST00000445181 PIK3C2AO00443 1686 aa33.29■■■□□ 2.92
C9orf3-207ENST00000445181 EDC4Q6P2E9 1401 aaKnown RBP33.28■■■□□ 2.92
C9orf3-207ENST00000445181 EP400Q96L91 3159 aa33.27■■■□□ 2.92
C9orf3-207ENST00000445181 CAMTA1Q9Y6Y1 1673 aa33.27■■■□□ 2.92
C9orf3-207ENST00000445181 BLMP54132 1417 aaPredicted RBP33.27■■■□□ 2.92
C9orf3-207ENST00000445181 ANKRD36BQ8N2N9 1353 aa33.26■■■□□ 2.92
C9orf3-207ENST00000445181 ZBTB7CA1YPR0 619 aa33.25■■■□□ 2.91
C9orf3-207ENST00000445181 USP35Q9P2H5 1018 aa33.24■■■□□ 2.91
C9orf3-207ENST00000445181 SLIT3O75094 1523 aa33.23■■■□□ 2.91
C9orf3-207ENST00000445181 LARP1Q6PKG0 1096 aaKnown RBP33.23■■■□□ 2.91
C9orf3-207ENST00000445181 LMO7Q8WWI1 1683 aa33.23■■■□□ 2.91
C9orf3-207ENST00000445181 NME9Q86XW9 330 aa33.22■■■□□ 2.91
C9orf3-207ENST00000445181 SF3B2Q13435 895 aaKnown RBP33.21■■■□□ 2.91
C9orf3-207ENST00000445181 THSD7AQ9UPZ6 1657 aa33.2■■■□□ 2.9
C9orf3-207ENST00000445181 MYOM1P52179 1685 aa33.18■■■□□ 2.9
C9orf3-207ENST00000445181 SOX12O15370 315 aa33.18■■■□□ 2.9
C9orf3-207ENST00000445181 ZRANB1Q9UGI0 708 aa33.18■■■□□ 2.9
C9orf3-207ENST00000445181 AATKQ6ZMQ8 1374 aa33.18■■■□□ 2.9
C9orf3-207ENST00000445181 FAM182BQ5T319 152 aa33.17■■■□□ 2.9
C9orf3-207ENST00000445181 KCNH5Q8NCM2 988 aa33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms