RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 USP21Q9UK80 565 aa19.13■□□□□ 0.65
GARNL3-208ENST00000444677 ITSN1Q15811 1721 aa19.12■□□□□ 0.65
GARNL3-208ENST00000444677 SBNO2Q9Y2G9 1366 aa19.12■□□□□ 0.65
GARNL3-208ENST00000444677 RXRBP28702 533 aa19.1■□□□□ 0.65
GARNL3-208ENST00000444677 CDK12Q9NYV4 1490 aaPredicted RBP19.09■□□□□ 0.65
GARNL3-208ENST00000444677 TRPM3Q9HCF6 1732 aaPredicted RBP19.09■□□□□ 0.65
GARNL3-208ENST00000444677 TOPAZ1Q8N9V7 1692 aa19.09■□□□□ 0.65
GARNL3-208ENST00000444677 FAM83GA6ND36 823 aa19.09■□□□□ 0.65
GARNL3-208ENST00000444677 RGS12O14924 1447 aa19.08■□□□□ 0.65
GARNL3-208ENST00000444677 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.08■□□□□ 0.65
GARNL3-208ENST00000444677 USP47Q96K76 1375 aa19.08■□□□□ 0.65
GARNL3-208ENST00000444677 ABTB2Q8N961 1025 aa19.08■□□□□ 0.64
GARNL3-208ENST00000444677 PLCH1Q4KWH8 1693 aa19.08■□□□□ 0.64
GARNL3-208ENST00000444677 TMC1Q8TDI8 760 aa19.07■□□□□ 0.64
GARNL3-208ENST00000444677 SLC12A5Q9H2X9 1139 aa19.07■□□□□ 0.64
GARNL3-208ENST00000444677 BCL9LQ86UU0 1499 aa19.07■□□□□ 0.64
GARNL3-208ENST00000444677 ATAD2Q6PL18 1390 aa19.06■□□□□ 0.64
GARNL3-208ENST00000444677 USP6P35125 1406 aa19.06■□□□□ 0.64
GARNL3-208ENST00000444677 RBM6P78332 1123 aaKnown RBP19.05■□□□□ 0.64
GARNL3-208ENST00000444677 TRPC5Q9UL62 973 aaPredicted RBP19.05■□□□□ 0.64
GARNL3-208ENST00000444677 ALS2Q96Q42 1657 aa19.05■□□□□ 0.64
GARNL3-208ENST00000444677 ZC3H6P61129 1189 aaKnown RBP19.04■□□□□ 0.64
GARNL3-208ENST00000444677 SSH2Q76I76 1423 aa19.04■□□□□ 0.64
GARNL3-208ENST00000444677 UNC5CLQ8IV45 518 aa19.04■□□□□ 0.64
GARNL3-208ENST00000444677 SLIT2O94813 1529 aa19.04■□□□□ 0.64
GARNL3-208ENST00000444677 TTC21BQ7Z4L5 1316 aa19.03■□□□□ 0.64
GARNL3-208ENST00000444677 ATRNO75882 1429 aa19.03■□□□□ 0.64
GARNL3-208ENST00000444677 ZNF692Q9BU19 519 aaPredicted RBP19.03■□□□□ 0.64
GARNL3-208ENST00000444677 CPSF1Q10570 1443 aaKnown RBP19.02■□□□□ 0.64
GARNL3-208ENST00000444677 NLRP6P59044 892 aa19.02■□□□□ 0.64
GARNL3-208ENST00000444677 CHRNA2Q15822 529 aa19.02■□□□□ 0.64
GARNL3-208ENST00000444677 CRYBG1Q9Y4K1 1723 aa19.01■□□□□ 0.63
GARNL3-208ENST00000444677 NLRP13Q86W25 1043 aa19.01■□□□□ 0.63
GARNL3-208ENST00000444677 PUS7Q96PZ0 661 aaKnown RBP19.01■□□□□ 0.63
GARNL3-208ENST00000444677 ZRANB1Q9UGI0 708 aa19.01■□□□□ 0.63
GARNL3-208ENST00000444677 USP19O94966 1318 aa19■□□□□ 0.63
GARNL3-208ENST00000444677 PRDM11Q9NQV5 511 aa19■□□□□ 0.63
GARNL3-208ENST00000444677 BTG4Q9NY30 223 aa19■□□□□ 0.63
GARNL3-208ENST00000444677 BRD4O60885 1362 aaPredicted RBP19■□□□□ 0.63
GARNL3-208ENST00000444677 KTN1Q86UP2 1357 aaKnown RBP19■□□□□ 0.63
GARNL3-208ENST00000444677 NWD2Q9ULI1 1742 aa19■□□□□ 0.63
GARNL3-208ENST00000444677 CD163L1Q9NR16 1453 aa18.99■□□□□ 0.63
GARNL3-208ENST00000444677 KIAA0232Q92628 1395 aa18.99■□□□□ 0.63
GARNL3-208ENST00000444677 GCP02774 474 aa18.99■□□□□ 0.63
GARNL3-208ENST00000444677 TMF1P82094 1093 aa18.99■□□□□ 0.63
GARNL3-208ENST00000444677 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.99■□□□□ 0.63
GARNL3-208ENST00000444677 GJD4Q96KN9 370 aaPredicted RBP18.99■□□□□ 0.63
GARNL3-208ENST00000444677 HSPA5P11021 654 aaKnown RBP18.97■□□□□ 0.63
GARNL3-208ENST00000444677 HDGFL2Q7Z4V5 671 aaPredicted RBP18.97■□□□□ 0.63
GARNL3-208ENST00000444677 VPS72Q15906 364 aa18.96■□□□□ 0.63
GARNL3-208ENST00000444677 NME9Q86XW9 330 aa18.96■□□□□ 0.63
GARNL3-208ENST00000444677 CCDC9Q9Y3X0 531 aaKnown RBP18.96■□□□□ 0.63
GARNL3-208ENST00000444677 GLI3P10071 1580 aa18.96■□□□□ 0.63
GARNL3-208ENST00000444677 NRAPQ86VF7 1730 aa18.96■□□□□ 0.63
GARNL3-208ENST00000444677 PHRF1Q9P1Y6 1649 aaKnown RBP18.96■□□□□ 0.63
GARNL3-208ENST00000444677 ZBTB7CA1YPR0 619 aa18.95■□□□□ 0.62
GARNL3-208ENST00000444677 SLC24A1O60721 1099 aa18.95■□□□□ 0.62
GARNL3-208ENST00000444677 UPF1Q92900 1129 aaKnown RBP eCLIP18.95■□□□□ 0.62
GARNL3-208ENST00000444677 BRWD3Q6RI45 1802 aa18.95■□□□□ 0.62
GARNL3-208ENST00000444677 A0A1W2PP64 1363 aa18.94■□□□□ 0.62
GARNL3-208ENST00000444677 SOX12O15370 315 aa18.94■□□□□ 0.62
GARNL3-208ENST00000444677 TERF2IPQ9NYB0 399 aa18.94■□□□□ 0.62
GARNL3-208ENST00000444677 TTC21AQ8NDW8 1320 aa18.94■□□□□ 0.62
GARNL3-208ENST00000444677 EIF4G2P78344 907 aaKnown RBP eCLIP18.93■□□□□ 0.62
GARNL3-208ENST00000444677 COL14A1Q05707 1796 aaKnown RBP18.92■□□□□ 0.62
GARNL3-208ENST00000444677 STRN4Q9NRL3 753 aa18.92■□□□□ 0.62
GARNL3-208ENST00000444677 CPDO75976 1380 aa18.9■□□□□ 0.62
GARNL3-208ENST00000444677 POLR3GLQ9BT43 218 aa18.89■□□□□ 0.61
GARNL3-208ENST00000444677 NRKQ7Z2Y5 1582 aa18.89■□□□□ 0.61
GARNL3-208ENST00000444677 CDCA8Q53HL2 280 aa18.88■□□□□ 0.61
GARNL3-208ENST00000444677 SEPT12Q8IYM1 358 aa18.88■□□□□ 0.61
GARNL3-208ENST00000444677 USP31Q70CQ4 1352 aa18.88■□□□□ 0.61
GARNL3-208ENST00000444677 EDC4Q6P2E9 1401 aaKnown RBP18.88■□□□□ 0.61
GARNL3-208ENST00000444677 PIK3C2AO00443 1686 aa18.88■□□□□ 0.61
GARNL3-208ENST00000444677 C11orf95C9JLR9 678 aaPredicted RBP18.87■□□□□ 0.61
GARNL3-208ENST00000444677 SLIT3O75094 1523 aa18.87■□□□□ 0.61
GARNL3-208ENST00000444677 EVA1CP58658 441 aa18.87■□□□□ 0.61
GARNL3-208ENST00000444677 FAM98CQ17RN3 349 aaKnown RBP18.87■□□□□ 0.61
GARNL3-208ENST00000444677 SPATA31A5Q5VU36 1347 aa18.87■□□□□ 0.61
GARNL3-208ENST00000444677 LARP1Q6PKG0 1096 aaKnown RBP18.87■□□□□ 0.61
GARNL3-208ENST00000444677 ARHGEF25Q86VW2 580 aa18.87■□□□□ 0.61
GARNL3-208ENST00000444677 SPATA31A7Q8IWB4 1347 aa18.87■□□□□ 0.61
GARNL3-208ENST00000444677 NINLQ9Y2I6 1382 aa18.87■□□□□ 0.61
GARNL3-208ENST00000444677 AXIN2Q9Y2T1 843 aa18.87■□□□□ 0.61
GARNL3-208ENST00000444677 ANKRD36BQ8N2N9 1353 aa18.86■□□□□ 0.61
GARNL3-208ENST00000444677 ONECUT3O60422 494 aaPredicted RBP18.86■□□□□ 0.61
GARNL3-208ENST00000444677 CAMTA1Q9Y6Y1 1673 aa18.85■□□□□ 0.61
GARNL3-208ENST00000444677 KCNH5Q8NCM2 988 aa18.85■□□□□ 0.61
GARNL3-208ENST00000444677 CARD14Q9BXL6 1004 aa18.85■□□□□ 0.61
GARNL3-208ENST00000444677 AKAP12Q02952 1782 aa18.85■□□□□ 0.61
GARNL3-208ENST00000444677 FBLN1P23142 703 aa18.84■□□□□ 0.61
GARNL3-208ENST00000444677 USP35Q9P2H5 1018 aa18.84■□□□□ 0.61
GARNL3-208ENST00000444677 SPATA31A1Q5TZJ5 1347 aa18.83■□□□□ 0.61
GARNL3-208ENST00000444677 EP400Q96L91 3159 aa18.83■□□□□ 0.6
GARNL3-208ENST00000444677 AATKQ6ZMQ8 1374 aa18.82■□□□□ 0.6
GARNL3-208ENST00000444677 A0A0G2JS52 829 aa18.82■□□□□ 0.6
GARNL3-208ENST00000444677 MYT1Q01538 1121 aa18.82■□□□□ 0.6
GARNL3-208ENST00000444677 GGNBP2Q9H3C7 697 aa18.82■□□□□ 0.6
GARNL3-208ENST00000444677 MON2Q7Z3U7 1717 aa18.81■□□□□ 0.6
GARNL3-208ENST00000444677 FYB1O15117 783 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms