RNA–Protein interactions for RNA: ENST00000444658.7

CCNDBP1-202, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-202ENST00000444658 SPINK5Q9NQ38 1064 aaPredicted RBP12.37□□□□□ -0.43
CCNDBP1-202ENST00000444658 NKTRP30414 1462 aaKnown RBP12.37□□□□□ -0.43
CCNDBP1-202ENST00000444658 LMTK3Q96Q04 1460 aa12.37□□□□□ -0.43
CCNDBP1-202ENST00000444658 NWD1Q149M9 1564 aa12.36□□□□□ -0.43
CCNDBP1-202ENST00000444658 PROSER2Q86WR7 435 aaPredicted RBP12.36□□□□□ -0.43
CCNDBP1-202ENST00000444658 TTC21AQ8NDW8 1320 aa12.36□□□□□ -0.43
CCNDBP1-202ENST00000444658 ADGRL3Q9HAR2 1447 aa12.36□□□□□ -0.43
CCNDBP1-202ENST00000444658 CFAP53Q96M91 514 aa12.35□□□□□ -0.43
CCNDBP1-202ENST00000444658 AATKQ6ZMQ8 1374 aa12.35□□□□□ -0.43
CCNDBP1-202ENST00000444658 SSH2Q76I76 1423 aa12.35□□□□□ -0.43
CCNDBP1-202ENST00000444658 MTHFSP49914 203 aa12.34□□□□□ -0.43
CCNDBP1-202ENST00000444658 WDR43Q15061 677 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCNDBP1-202ENST00000444658 TTC21BQ7Z4L5 1316 aa12.34□□□□□ -0.43
CCNDBP1-202ENST00000444658 PNPLA6Q8IY17 1366 aa12.34□□□□□ -0.43
CCNDBP1-202ENST00000444658 GGNBP2Q9H3C7 697 aa12.34□□□□□ -0.43
CCNDBP1-202ENST00000444658 ADAMTS8Q9UP79 889 aa12.34□□□□□ -0.43
CCNDBP1-202ENST00000444658 HSPA2P54652 639 aa12.34□□□□□ -0.43
CCNDBP1-202ENST00000444658 USP6P35125 1406 aa12.33□□□□□ -0.44
CCNDBP1-202ENST00000444658 PDE3BQ13370 1112 aa12.33□□□□□ -0.44
CCNDBP1-202ENST00000444658 NGDNQ8NEJ9 315 aaKnown RBP12.33□□□□□ -0.44
CCNDBP1-202ENST00000444658 COG3Q96JB2 828 aa12.33□□□□□ -0.44
CCNDBP1-202ENST00000444658 USP31Q70CQ4 1352 aa12.32□□□□□ -0.44
CCNDBP1-202ENST00000444658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.32□□□□□ -0.44
CCNDBP1-202ENST00000444658 DCCP43146 1447 aa12.31□□□□□ -0.44
CCNDBP1-202ENST00000444658 PHF8Q9UPP1 1060 aa12.31□□□□□ -0.44
CCNDBP1-202ENST00000444658 BLMP54132 1417 aaPredicted RBP12.31□□□□□ -0.44
CCNDBP1-202ENST00000444658 POLKQ9UBT6 870 aa12.3□□□□□ -0.44
CCNDBP1-202ENST00000444658 NUDCQ9Y266 331 aa12.3□□□□□ -0.44
CCNDBP1-202ENST00000444658 CADPS2Q86UW7 1296 aa12.29□□□□□ -0.44
CCNDBP1-202ENST00000444658 NME9Q86XW9 330 aa12.29□□□□□ -0.44
CCNDBP1-202ENST00000444658 PNNQ9H307 717 aaKnown RBP12.29□□□□□ -0.44
CCNDBP1-202ENST00000444658 TOPAZ1Q8N9V7 1692 aa12.29□□□□□ -0.44
CCNDBP1-202ENST00000444658 NUTM2FA1L443 756 aa12.28□□□□□ -0.44
CCNDBP1-202ENST00000444658 TNNT2P45379 298 aaPredicted RBP12.28□□□□□ -0.44
CCNDBP1-202ENST00000444658 C14orf37Q86TY3 774 aa12.28□□□□□ -0.44
CCNDBP1-202ENST00000444658 PMFBP1Q8TBY8 1022 aa12.28□□□□□ -0.44
CCNDBP1-202ENST00000444658 ZNF219Q9P2Y4 722 aaPredicted RBP12.28□□□□□ -0.44
CCNDBP1-202ENST00000444658 ATF3P18847 181 aa12.27□□□□□ -0.44
CCNDBP1-202ENST00000444658 TMEM94Q12767 1356 aa12.27□□□□□ -0.44
CCNDBP1-202ENST00000444658 FMN2Q9NZ56 1722 aa12.27□□□□□ -0.45
CCNDBP1-202ENST00000444658 SMG6Q86US8 1419 aaKnown RBP12.27□□□□□ -0.45
CCNDBP1-202ENST00000444658 ESCO1Q5FWF5 840 aa12.27□□□□□ -0.45
CCNDBP1-202ENST00000444658 MON2Q7Z3U7 1717 aa12.26□□□□□ -0.45
CCNDBP1-202ENST00000444658 DIAPH1O60610 1272 aaKnown RBP12.26□□□□□ -0.45
CCNDBP1-202ENST00000444658 OVOS2A0A0J9YW53 1432 aa12.25□□□□□ -0.45
CCNDBP1-202ENST00000444658 OVOS2Q6IE36 1432 aa12.25□□□□□ -0.45
CCNDBP1-202ENST00000444658 AKAP12Q02952 1782 aa12.25□□□□□ -0.45
CCNDBP1-202ENST00000444658 FCHSD2O94868 740 aa12.25□□□□□ -0.45
CCNDBP1-202ENST00000444658 ATXN8OSP0DMR3 200 aa12.25□□□□□ -0.45
CCNDBP1-202ENST00000444658 PSME1Q06323 249 aa12.25□□□□□ -0.45
CCNDBP1-202ENST00000444658 RUNDC1Q96C34 613 aa12.25□□□□□ -0.45
CCNDBP1-202ENST00000444658 ITSN1Q15811 1721 aa12.25□□□□□ -0.45
CCNDBP1-202ENST00000444658 KIF24Q5T7B8 1368 aa12.25□□□□□ -0.45
CCNDBP1-202ENST00000444658 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
CCNDBP1-202ENST00000444658 C1orf167Q5SNV9 1468 aa12.24□□□□□ -0.45
CCNDBP1-202ENST00000444658 MST1RQ04912 1400 aa12.24□□□□□ -0.45
CCNDBP1-202ENST00000444658 ANKRD26Q9UPS8 1709 aa12.24□□□□□ -0.45
CCNDBP1-202ENST00000444658 STRCQ7RTU9 1775 aa12.23□□□□□ -0.45
CCNDBP1-202ENST00000444658 MSH6P52701 1360 aa12.23□□□□□ -0.45
CCNDBP1-202ENST00000444658 CCDC27Q2M243 656 aa12.23□□□□□ -0.45
CCNDBP1-202ENST00000444658 ZRANB1Q9UGI0 708 aa12.23□□□□□ -0.45
CCNDBP1-202ENST00000444658 ZNF521Q96K83 1311 aa12.23□□□□□ -0.45
CCNDBP1-202ENST00000444658 NLRP6P59044 892 aa12.22□□□□□ -0.45
CCNDBP1-202ENST00000444658 ABTB2Q8N961 1025 aa12.22□□□□□ -0.45
CCNDBP1-202ENST00000444658 NALCNQ8IZF0 1738 aa12.22□□□□□ -0.45
CCNDBP1-202ENST00000444658 NRKQ7Z2Y5 1582 aa12.22□□□□□ -0.45
CCNDBP1-202ENST00000444658 COL3A1P02461 1466 aaPredicted RBP12.22□□□□□ -0.45
CCNDBP1-202ENST00000444658 IL13P35225 146 aa12.21□□□□□ -0.45
CCNDBP1-202ENST00000444658 KCNH5Q8NCM2 988 aa12.21□□□□□ -0.45
CCNDBP1-202ENST00000444658 ORAI2Q96SN7 254 aa12.21□□□□□ -0.45
CCNDBP1-202ENST00000444658 LRRC7Q96NW7 1537 aa12.21□□□□□ -0.46
CCNDBP1-202ENST00000444658 U2AF1L5P0DN76 240 aaPredicted RBP12.21□□□□□ -0.46
CCNDBP1-202ENST00000444658 U2AF1Q01081 240 aaKnown RBP eCLIP12.21□□□□□ -0.46
CCNDBP1-202ENST00000444658 PLEKHF1Q96S99 279 aa12.21□□□□□ -0.46
CCNDBP1-202ENST00000444658 CDK12Q9NYV4 1490 aaPredicted RBP12.2□□□□□ -0.46
CCNDBP1-202ENST00000444658 KIF20BQ96Q89 1820 aa12.2□□□□□ -0.46
CCNDBP1-202ENST00000444658 APAF1O14727 1248 aa12.2□□□□□ -0.46
CCNDBP1-202ENST00000444658 KRT28Q7Z3Y7 464 aa12.2□□□□□ -0.46
CCNDBP1-202ENST00000444658 EMILIN1Q9Y6C2 1016 aa12.2□□□□□ -0.46
CCNDBP1-202ENST00000444658 FOXO3O43524 673 aa12.19□□□□□ -0.46
CCNDBP1-202ENST00000444658 MYT1Q01538 1121 aa12.19□□□□□ -0.46
CCNDBP1-202ENST00000444658 WDR63Q8IWG1 891 aa12.19□□□□□ -0.46
CCNDBP1-202ENST00000444658 TRMT2AQ8IZ69 625 aaKnown RBP12.19□□□□□ -0.46
CCNDBP1-202ENST00000444658 ZNF335Q9H4Z2 1342 aaPredicted RBP12.19□□□□□ -0.46
CCNDBP1-202ENST00000444658 SBNO1A3KN83 1393 aa12.18□□□□□ -0.46
CCNDBP1-202ENST00000444658 GOLGA2Q08379 1002 aa12.18□□□□□ -0.46
CCNDBP1-202ENST00000444658 TCP11L2Q8N4U5 519 aa12.18□□□□□ -0.46
CCNDBP1-202ENST00000444658 ATF5Q9Y2D1 282 aaPredicted RBP12.18□□□□□ -0.46
CCNDBP1-202ENST00000444658 NPHP3Q7Z494 1330 aa12.18□□□□□ -0.46
CCNDBP1-202ENST00000444658 PAK3O75914 559 aaPredicted RBP12.17□□□□□ -0.46
CCNDBP1-202ENST00000444658 NEFLP07196 543 aa12.17□□□□□ -0.46
CCNDBP1-202ENST00000444658 FBLN1P23142 703 aa12.17□□□□□ -0.46
CCNDBP1-202ENST00000444658 RRS1Q15050 365 aaKnown RBP12.17□□□□□ -0.46
CCNDBP1-202ENST00000444658 ERICH6BQ5W0A0 696 aa12.17□□□□□ -0.46
CCNDBP1-202ENST00000444658 SLAIN2Q9P270 581 aa12.17□□□□□ -0.46
CCNDBP1-202ENST00000444658 SUPT16HQ9Y5B9 1047 aaKnown RBP12.17□□□□□ -0.46
CCNDBP1-202ENST00000444658 U2SURPO15042 1029 aaKnown RBP12.16□□□□□ -0.46
CCNDBP1-202ENST00000444658 PPM1GO15355 546 aaPredicted RBP12.16□□□□□ -0.46
CCNDBP1-202ENST00000444658 WWC1Q8IX03 1113 aa12.16□□□□□ -0.46
CCNDBP1-202ENST00000444658 FLT4P35916 1363 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 755.6 ms