RNA–Protein interactions for RNA: ENST00000444476.1

LINC00475-208, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-208ENST00000444476 NAIPQ13075 1403 aa16.58■□□□□ 0.24
LINC00475-208ENST00000444476 TET3O43151 1660 aa16.58■□□□□ 0.24
LINC00475-208ENST00000444476 PLA2R1Q13018 1463 aa16.57■□□□□ 0.24
LINC00475-208ENST00000444476 IQGAP3Q86VI3 1631 aa16.56■□□□□ 0.24
LINC00475-208ENST00000444476 ACIN1Q9UKV3 1341 aaKnown RBP16.56■□□□□ 0.24
LINC00475-208ENST00000444476 MAP3K9P80192 1104 aa16.55■□□□□ 0.24
LINC00475-208ENST00000444476 ZDHHC16Q969W1 377 aa16.55■□□□□ 0.24
LINC00475-208ENST00000444476 NUP155O75694 1391 aa16.54■□□□□ 0.24
LINC00475-208ENST00000444476 GOLGA8CPA6NN73 597 aa16.54■□□□□ 0.24
LINC00475-208ENST00000444476 CFAP65Q6ZU64 1925 aaKnown RBP16.53■□□□□ 0.24
LINC00475-208ENST00000444476 UGGT1Q9NYU2 1555 aa16.52■□□□□ 0.24
LINC00475-208ENST00000444476 THEMISQ8N1K5 641 aaPredicted RBP16.52■□□□□ 0.24
LINC00475-208ENST00000444476 ZBED2Q9BTP6 218 aa16.52■□□□□ 0.24
LINC00475-208ENST00000444476 NOS1P29475 1434 aa16.52■□□□□ 0.23
LINC00475-208ENST00000444476 BHMG1C9JSJ3 638 aaPredicted RBP16.51■□□□□ 0.23
LINC00475-208ENST00000444476 PTPN5P54829 565 aa16.51■□□□□ 0.23
LINC00475-208ENST00000444476 MFSD10Q14728 455 aa16.51■□□□□ 0.23
LINC00475-208ENST00000444476 MRPL50Q8N5N7 158 aaKnown RBP16.51■□□□□ 0.23
LINC00475-208ENST00000444476 STRCQ7RTU9 1775 aa16.51■□□□□ 0.23
LINC00475-208ENST00000444476 SLC52A1Q9NWF4 448 aa16.5■□□□□ 0.23
LINC00475-208ENST00000444476 PTPRTO14522 1441 aa16.5■□□□□ 0.23
LINC00475-208ENST00000444476 KDM5AP29375 1690 aaKnown RBP16.5■□□□□ 0.23
LINC00475-208ENST00000444476 NBPF3Q9H094 633 aa16.49■□□□□ 0.23
LINC00475-208ENST00000444476 E9PCH4 1651 aa16.46■□□□□ 0.23
LINC00475-208ENST00000444476 THSD4Q6ZMP0 1018 aa16.46■□□□□ 0.23
LINC00475-208ENST00000444476 ADAM33Q9BZ11 813 aa16.46■□□□□ 0.23
LINC00475-208ENST00000444476 SYNMO15061 1565 aa16.46■□□□□ 0.23
LINC00475-208ENST00000444476 UBR1Q8IWV7 1749 aa16.45■□□□□ 0.22
LINC00475-208ENST00000444476 ANKLE2Q86XL3 938 aa16.45■□□□□ 0.22
LINC00475-208ENST00000444476 WNT2BQ93097 391 aa16.45■□□□□ 0.22
LINC00475-208ENST00000444476 POLR1AO95602 1720 aaPredicted RBP16.45■□□□□ 0.22
LINC00475-208ENST00000444476 IDI1Q13907 227 aa16.43■□□□□ 0.22
LINC00475-208ENST00000444476 IFFO2Q5TF58 517 aa16.43■□□□□ 0.22
LINC00475-208ENST00000444476 PIK3C2BO00750 1634 aa16.43■□□□□ 0.22
LINC00475-208ENST00000444476 SETD5Q9C0A6 1442 aa16.43■□□□□ 0.22
LINC00475-208ENST00000444476 SLIT1O75093 1534 aa16.42■□□□□ 0.22
LINC00475-208ENST00000444476 TRIM52Q96A61 297 aa16.42■□□□□ 0.22
LINC00475-208ENST00000444476 ADGRB3O60242 1522 aa16.41■□□□□ 0.22
LINC00475-208ENST00000444476 MED14O60244 1454 aa16.41■□□□□ 0.22
LINC00475-208ENST00000444476 ARHGAP23Q9P227 1491 aa16.41■□□□□ 0.22
LINC00475-208ENST00000444476 PPP1R3GB7ZBB8 358 aa16.4■□□□□ 0.22
LINC00475-208ENST00000444476 SPHKAPQ2M3C7 1700 aa16.39■□□□□ 0.21
LINC00475-208ENST00000444476 FBXW7Q969H0 707 aa16.39■□□□□ 0.21
LINC00475-208ENST00000444476 EID1Q9Y6B2 187 aa16.39■□□□□ 0.21
LINC00475-208ENST00000444476 SCAF11Q99590 1463 aaKnown RBP16.39■□□□□ 0.21
LINC00475-208ENST00000444476 TMEM2Q9UHN6 1383 aa16.38■□□□□ 0.21
LINC00475-208ENST00000444476 RGS20O76081 388 aa16.38■□□□□ 0.21
LINC00475-208ENST00000444476 EMILIN3Q9NT22 766 aa16.38■□□□□ 0.21
LINC00475-208ENST00000444476 NEURL4Q96JN8 1562 aa16.38■□□□□ 0.21
LINC00475-208ENST00000444476 HRCP23327 699 aa16.37■□□□□ 0.21
LINC00475-208ENST00000444476 HDGFP51858 240 aaKnown RBP16.37■□□□□ 0.21
LINC00475-208ENST00000444476 FBXO41Q8TF61 875 aa16.37■□□□□ 0.21
LINC00475-208ENST00000444476 NPHP4O75161 1426 aaPredicted RBP16.36■□□□□ 0.21
LINC00475-208ENST00000444476 TRPM2O94759 1503 aa16.36■□□□□ 0.21
LINC00475-208ENST00000444476 PCDHGA10Q9Y5H3 936 aa16.36■□□□□ 0.21
LINC00475-208ENST00000444476 TMEM131LA2VDJ0 1609 aa16.35■□□□□ 0.21
LINC00475-208ENST00000444476 IQGAP1P46940 1657 aa16.35■□□□□ 0.21
LINC00475-208ENST00000444476 TYW1BQ6NUM6 668 aa16.35■□□□□ 0.21
LINC00475-208ENST00000444476 RABGEF1Q9UJ41 708 aa16.35■□□□□ 0.21
LINC00475-208ENST00000444476 PHF14O94880 888 aa16.34■□□□□ 0.21
LINC00475-208ENST00000444476 TXNDC2Q86VQ3 553 aa16.34■□□□□ 0.21
LINC00475-208ENST00000444476 RAB3GAP2Q9H2M9 1393 aa16.34■□□□□ 0.21
LINC00475-208ENST00000444476 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.32■□□□□ 0.2
LINC00475-208ENST00000444476 MPHOSPH9Q99550 1183 aa16.32■□□□□ 0.2
LINC00475-208ENST00000444476 LTKP29376 864 aa16.3■□□□□ 0.2
LINC00475-208ENST00000444476 ANKK1Q8NFD2 765 aa16.3■□□□□ 0.2
LINC00475-208ENST00000444476 ZFYVE9O95405 1425 aa16.29■□□□□ 0.2
LINC00475-208ENST00000444476 MYO5BQ9ULV0 1848 aa16.29■□□□□ 0.2
LINC00475-208ENST00000444476 IQSEC2Q5JU85 1478 aa16.29■□□□□ 0.2
LINC00475-208ENST00000444476 RIMS2Q9UQ26 1411 aa16.28■□□□□ 0.2
LINC00475-208ENST00000444476 CLTCL1P53675 1640 aa16.28■□□□□ 0.2
LINC00475-208ENST00000444476 LTBP4Q8N2S1 1624 aa16.28■□□□□ 0.2
LINC00475-208ENST00000444476 CERKQ8TCT0 537 aa16.28■□□□□ 0.2
LINC00475-208ENST00000444476 KIF1BO60333 1816 aa16.28■□□□□ 0.2
LINC00475-208ENST00000444476 LAPTM4BQ86VI4 370 aa16.27■□□□□ 0.2
LINC00475-208ENST00000444476 EPAS1Q99814 870 aa16.27■□□□□ 0.2
LINC00475-208ENST00000444476 CPS1P31327 1500 aa16.27■□□□□ 0.2
LINC00475-208ENST00000444476 PLEKHG1Q9ULL1 1385 aa16.26■□□□□ 0.19
LINC00475-208ENST00000444476 PPP1R15AO75807 674 aaPredicted RBP16.26■□□□□ 0.19
LINC00475-208ENST00000444476 CCDC144AA2RUR9 1427 aa16.26■□□□□ 0.19
LINC00475-208ENST00000444476 ZNF335Q9H4Z2 1342 aaPredicted RBP16.25■□□□□ 0.19
LINC00475-208ENST00000444476 CADPS2Q86UW7 1296 aa16.25■□□□□ 0.19
LINC00475-208ENST00000444476 A0A0G2JS52 829 aa16.24■□□□□ 0.19
LINC00475-208ENST00000444476 ONECUT3O60422 494 aaPredicted RBP16.24■□□□□ 0.19
LINC00475-208ENST00000444476 COL9A1P20849 921 aa16.24■□□□□ 0.19
LINC00475-208ENST00000444476 PROX2Q3B8N5 592 aa16.24■□□□□ 0.19
LINC00475-208ENST00000444476 CAMK2BQ13554 666 aa16.23■□□□□ 0.19
LINC00475-208ENST00000444476 RPGRIP1LQ68CZ1 1315 aa16.22■□□□□ 0.19
LINC00475-208ENST00000444476 ZNF326Q5BKZ1 582 aaKnown RBP16.22■□□□□ 0.19
LINC00475-208ENST00000444476 DIP2AQ14689 1571 aa16.21■□□□□ 0.19
LINC00475-208ENST00000444476 NYAP1Q6ZVC0 841 aa16.2■□□□□ 0.18
LINC00475-208ENST00000444476 BCANQ96GW7 911 aa16.19■□□□□ 0.18
LINC00475-208ENST00000444476 PIK3R4Q99570 1358 aa16.18■□□□□ 0.18
LINC00475-208ENST00000444476 TRIM26Q12899 539 aaPredicted RBP16.18■□□□□ 0.18
LINC00475-208ENST00000444476 TBX22Q9Y458 520 aa16.18■□□□□ 0.18
LINC00475-208ENST00000444476 NEXMIFQ5QGS0 1516 aa16.18■□□□□ 0.18
LINC00475-208ENST00000444476 C6orf132Q5T0Z8 1188 aa16.17■□□□□ 0.18
LINC00475-208ENST00000444476 KIAA1468Q9P260 1216 aa16.17■□□□□ 0.18
LINC00475-208ENST00000444476 SETBP1Q9Y6X0 1596 aa16.17■□□□□ 0.18
LINC00475-208ENST00000444476 DPYSL4O14531 572 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms