RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 PSME1Q06323 249 aa18.5■□□□□ 0.55
SF1-210ENST00000443908 CCDC125Q86Z20 511 aa18.5■□□□□ 0.55
SF1-210ENST00000443908 ATP7BP35670 1465 aa18.5■□□□□ 0.55
SF1-210ENST00000443908 UNC5CLQ8IV45 518 aa18.49■□□□□ 0.55
SF1-210ENST00000443908 ANKARQ7Z5J8 1434 aa18.49■□□□□ 0.55
SF1-210ENST00000443908 CABP2Q9NPB3 220 aa18.48■□□□□ 0.55
SF1-210ENST00000443908 FMN2Q9NZ56 1722 aa18.48■□□□□ 0.55
SF1-210ENST00000443908 SPATA31A3Q5VYP0 1347 aa18.48■□□□□ 0.55
SF1-210ENST00000443908 TOPAZ1Q8N9V7 1692 aa18.47■□□□□ 0.55
SF1-210ENST00000443908 BCL9LQ86UU0 1499 aa18.47■□□□□ 0.55
SF1-210ENST00000443908 PHF8Q9UPP1 1060 aa18.47■□□□□ 0.55
SF1-210ENST00000443908 CCDC9Q9Y3X0 531 aaKnown RBP18.47■□□□□ 0.55
SF1-210ENST00000443908 ANKRD36BQ8N2N9 1353 aa18.46■□□□□ 0.55
SF1-210ENST00000443908 CABLES1Q8TDN4 633 aa18.46■□□□□ 0.55
SF1-210ENST00000443908 PXDNQ92626 1479 aa18.46■□□□□ 0.54
SF1-210ENST00000443908 ITSN1Q15811 1721 aa18.44■□□□□ 0.54
SF1-210ENST00000443908 PER1O15534 1290 aaPredicted RBP18.44■□□□□ 0.54
SF1-210ENST00000443908 PANK3Q9H999 370 aa18.44■□□□□ 0.54
SF1-210ENST00000443908 USP32Q8NFA0 1604 aa18.44■□□□□ 0.54
SF1-210ENST00000443908 SF3B2Q13435 895 aaKnown RBP18.43■□□□□ 0.54
SF1-210ENST00000443908 NUDT16Q96DE0 195 aaKnown RBP18.43■□□□□ 0.54
SF1-210ENST00000443908 PRR36Q9H6K5 1346 aa18.43■□□□□ 0.54
SF1-210ENST00000443908 CD163L1Q9NR16 1453 aa18.42■□□□□ 0.54
SF1-210ENST00000443908 PMFBP1Q8TBY8 1022 aa18.42■□□□□ 0.54
SF1-210ENST00000443908 SLC12A5Q9H2X9 1139 aa18.42■□□□□ 0.54
SF1-210ENST00000443908 CCDC61Q9Y6R9 512 aa18.42■□□□□ 0.54
SF1-210ENST00000443908 NPC1L1Q9UHC9 1359 aa18.42■□□□□ 0.54
SF1-210ENST00000443908 COL22A1Q8NFW1 1626 aaPredicted RBP18.41■□□□□ 0.54
SF1-210ENST00000443908 PPIP5K1Q6PFW1 1433 aa18.41■□□□□ 0.54
SF1-210ENST00000443908 SEPT12Q8IYM1 358 aa18.41■□□□□ 0.54
SF1-210ENST00000443908 TMC1Q8TDI8 760 aa18.41■□□□□ 0.54
SF1-210ENST00000443908 KTN1Q86UP2 1357 aaKnown RBP18.41■□□□□ 0.54
SF1-210ENST00000443908 A0A0G2JS52 829 aa18.4■□□□□ 0.54
SF1-210ENST00000443908 ANP32CO43423 234 aa18.4■□□□□ 0.54
SF1-210ENST00000443908 MYT1Q01538 1121 aa18.4■□□□□ 0.54
SF1-210ENST00000443908 TERF2IPQ9NYB0 399 aa18.4■□□□□ 0.54
SF1-210ENST00000443908 CPSF1Q10570 1443 aaKnown RBP18.4■□□□□ 0.54
SF1-210ENST00000443908 A0A1W2PP64 1363 aa18.39■□□□□ 0.53
SF1-210ENST00000443908 PLEKHG3A1L390 1219 aa18.38■□□□□ 0.53
SF1-210ENST00000443908 VPS72Q15906 364 aa18.37■□□□□ 0.53
SF1-210ENST00000443908 CABP1Q9NZU7 370 aa18.37■□□□□ 0.53
SF1-210ENST00000443908 KNSTRNQ9Y448 316 aa18.37■□□□□ 0.53
SF1-210ENST00000443908 NSD3Q9BZ95 1437 aa18.37■□□□□ 0.53
SF1-210ENST00000443908 AKAP12Q02952 1782 aa18.37■□□□□ 0.53
SF1-210ENST00000443908 FAM83GA6ND36 823 aa18.36■□□□□ 0.53
SF1-210ENST00000443908 MON2Q7Z3U7 1717 aa18.36■□□□□ 0.53
SF1-210ENST00000443908 HDGFL2Q7Z4V5 671 aaPredicted RBP18.36■□□□□ 0.53
SF1-210ENST00000443908 DEFB132Q7Z7B7 95 aa18.36■□□□□ 0.53
SF1-210ENST00000443908 CARD14Q9BXL6 1004 aa18.36■□□□□ 0.53
SF1-210ENST00000443908 SRCAPQ6ZRS2 3230 aa18.35■□□□□ 0.53
SF1-210ENST00000443908 POLR3AO14802 1390 aaPredicted RBP18.35■□□□□ 0.53
SF1-210ENST00000443908 MIER1Q8N108 512 aa18.35■□□□□ 0.53
SF1-210ENST00000443908 PRKRIP1Q9H875 184 aaPredicted RBP18.35■□□□□ 0.53
SF1-210ENST00000443908 SLIT2O94813 1529 aa18.34■□□□□ 0.53
SF1-210ENST00000443908 NSD2O96028 1365 aa18.34■□□□□ 0.53
SF1-210ENST00000443908 AMER1Q5JTC6 1135 aaPredicted RBP18.34■□□□□ 0.53
SF1-210ENST00000443908 KRT27Q7Z3Y8 459 aa18.34■□□□□ 0.53
SF1-210ENST00000443908 TNS3Q68CZ2 1445 aa18.33■□□□□ 0.53
SF1-210ENST00000443908 EDC4Q6P2E9 1401 aaKnown RBP18.33■□□□□ 0.53
SF1-210ENST00000443908 PARD3Q8TEW0 1356 aa18.33■□□□□ 0.53
SF1-210ENST00000443908 ZNF692Q9BU19 519 aaPredicted RBP18.33■□□□□ 0.52
SF1-210ENST00000443908 NRKQ7Z2Y5 1582 aa18.33■□□□□ 0.52
SF1-210ENST00000443908 BLMP54132 1417 aaPredicted RBP18.32■□□□□ 0.52
SF1-210ENST00000443908 SBNO1A3KN83 1393 aa18.32■□□□□ 0.52
SF1-210ENST00000443908 ARHGEF10O15013 1369 aa18.32■□□□□ 0.52
SF1-210ENST00000443908 PAK3O75914 559 aaPredicted RBP18.32■□□□□ 0.52
SF1-210ENST00000443908 RGPD8O14715 1765 aaPredicted RBP18.32■□□□□ 0.52
SF1-210ENST00000443908 KIF1AQ12756 1690 aa18.31■□□□□ 0.52
SF1-210ENST00000443908 CGNL1Q0VF96 1302 aa18.31■□□□□ 0.52
SF1-210ENST00000443908 ONECUT3O60422 494 aaPredicted RBP18.31■□□□□ 0.52
SF1-210ENST00000443908 RALBP1Q15311 655 aa18.31■□□□□ 0.52
SF1-210ENST00000443908 NGDNQ8NEJ9 315 aaKnown RBP18.31■□□□□ 0.52
SF1-210ENST00000443908 BTG4Q9NY30 223 aa18.31■□□□□ 0.52
SF1-210ENST00000443908 MARF1Q9Y4F3 1742 aaKnown RBP18.31■□□□□ 0.52
SF1-210ENST00000443908 BRD4O60885 1362 aaPredicted RBP18.3■□□□□ 0.52
SF1-210ENST00000443908 CCER2I3L3R5 266 aa18.3■□□□□ 0.52
SF1-210ENST00000443908 FAM98CQ17RN3 349 aaKnown RBP18.3■□□□□ 0.52
SF1-210ENST00000443908 USP6P35125 1406 aa18.3■□□□□ 0.52
SF1-210ENST00000443908 ACEP12821 1306 aa18.29■□□□□ 0.52
SF1-210ENST00000443908 EP400Q96L91 3159 aa18.29■□□□□ 0.52
SF1-210ENST00000443908 SSH2Q76I76 1423 aa18.28■□□□□ 0.52
SF1-210ENST00000443908 ANKRD26Q9UPS8 1709 aa18.28■□□□□ 0.52
SF1-210ENST00000443908 GLI3P10071 1580 aa18.27■□□□□ 0.52
SF1-210ENST00000443908 KIF20BQ96Q89 1820 aa18.26■□□□□ 0.51
SF1-210ENST00000443908 BAG6P46379 1132 aa18.26■□□□□ 0.51
SF1-210ENST00000443908 MYBBP1AQ9BQG0 1328 aaKnown RBP18.24■□□□□ 0.51
SF1-210ENST00000443908 CC2D1BQ5T0F9 858 aaKnown RBP18.24■□□□□ 0.51
SF1-210ENST00000443908 FAM182BQ5T319 152 aa18.24■□□□□ 0.51
SF1-210ENST00000443908 TTC21AQ8NDW8 1320 aa18.23■□□□□ 0.51
SF1-210ENST00000443908 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.23■□□□□ 0.51
SF1-210ENST00000443908 PSDA5PKW4 1024 aaPredicted RBP18.23■□□□□ 0.51
SF1-210ENST00000443908 PRDM11Q9NQV5 511 aa18.23■□□□□ 0.51
SF1-210ENST00000443908 TTC21BQ7Z4L5 1316 aa18.22■□□□□ 0.51
SF1-210ENST00000443908 FYB1O15117 783 aa18.21■□□□□ 0.51
SF1-210ENST00000443908 USP54Q70EL1 1684 aa18.21■□□□□ 0.51
SF1-210ENST00000443908 EN1Q05925 392 aaPredicted RBP18.2■□□□□ 0.5
SF1-210ENST00000443908 NUTM2GQ5VZR2 741 aa18.2■□□□□ 0.5
SF1-210ENST00000443908 STRN4Q9NRL3 753 aa18.2■□□□□ 0.5
SF1-210ENST00000443908 BRWD3Q6RI45 1802 aa18.19■□□□□ 0.5
SF1-210ENST00000443908 EVA1CP58658 441 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms