RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 AEBP2Q6ZN18 517 aaPredicted RBP15.37■□□□□ 0.05
SMPD4P2-201ENST00000440167 BLMP54132 1417 aaPredicted RBP15.37■□□□□ 0.05
SMPD4P2-201ENST00000440167 PIK3C2AO00443 1686 aa15.37■□□□□ 0.05
SMPD4P2-201ENST00000440167 MTHFSP49914 203 aa15.36■□□□□ 0.05
SMPD4P2-201ENST00000440167 WDR43Q15061 677 aaKnown RBP eCLIP15.36■□□□□ 0.05
SMPD4P2-201ENST00000440167 NGDNQ8NEJ9 315 aaKnown RBP15.36■□□□□ 0.05
SMPD4P2-201ENST00000440167 ZBED9Q6R2W3 1325 aa15.36■□□□□ 0.05
SMPD4P2-201ENST00000440167 TTC21BQ7Z4L5 1316 aa15.36■□□□□ 0.05
SMPD4P2-201ENST00000440167 ADAMTS8Q9UP79 889 aa15.35■□□□□ 0.05
SMPD4P2-201ENST00000440167 TMEM94Q12767 1356 aa15.35■□□□□ 0.05
SMPD4P2-201ENST00000440167 MARF1Q9Y4F3 1742 aaKnown RBP15.35■□□□□ 0.05
SMPD4P2-201ENST00000440167 SSH2Q76I76 1423 aa15.35■□□□□ 0.05
SMPD4P2-201ENST00000440167 FBLN1P23142 703 aa15.34■□□□□ 0.05
SMPD4P2-201ENST00000440167 COG3Q96JB2 828 aa15.32■□□□□ 0.04
SMPD4P2-201ENST00000440167 PHF8Q9UPP1 1060 aa15.32■□□□□ 0.04
SMPD4P2-201ENST00000440167 COL3A1P02461 1466 aaPredicted RBP15.32■□□□□ 0.04
SMPD4P2-201ENST00000440167 KIF1AQ12756 1690 aa15.32■□□□□ 0.04
SMPD4P2-201ENST00000440167 OVOS2A0A0J9YW53 1432 aa15.32■□□□□ 0.04
SMPD4P2-201ENST00000440167 OVOS2Q6IE36 1432 aa15.32■□□□□ 0.04
SMPD4P2-201ENST00000440167 ESCO1Q5FWF5 840 aa15.32■□□□□ 0.04
SMPD4P2-201ENST00000440167 USP54Q70EL1 1684 aa15.31■□□□□ 0.04
SMPD4P2-201ENST00000440167 ZNF335Q9H4Z2 1342 aaPredicted RBP15.31■□□□□ 0.04
SMPD4P2-201ENST00000440167 CFAP53Q96M91 514 aa15.31■□□□□ 0.04
SMPD4P2-201ENST00000440167 INSRP06213 1382 aa15.31■□□□□ 0.04
SMPD4P2-201ENST00000440167 C19orf44Q9H6X5 657 aa15.3■□□□□ 0.04
SMPD4P2-201ENST00000440167 SALL2Q9Y467 1007 aaPredicted RBP15.3■□□□□ 0.04
SMPD4P2-201ENST00000440167 TTC21AQ8NDW8 1320 aa15.3■□□□□ 0.04
SMPD4P2-201ENST00000440167 C1orf167Q5SNV9 1468 aa15.29■□□□□ 0.04
SMPD4P2-201ENST00000440167 ORAI2Q96SN7 254 aa15.29■□□□□ 0.04
SMPD4P2-201ENST00000440167 LRRC7Q96NW7 1537 aa15.29■□□□□ 0.04
SMPD4P2-201ENST00000440167 CCDC146Q8IYE0 955 aa15.28■□□□□ 0.04
SMPD4P2-201ENST00000440167 MST1RQ04912 1400 aa15.28■□□□□ 0.04
SMPD4P2-201ENST00000440167 NCOA3Q9Y6Q9 1424 aa15.28■□□□□ 0.04
SMPD4P2-201ENST00000440167 PEAK1Q9H792 1746 aa15.28■□□□□ 0.04
SMPD4P2-201ENST00000440167 TRPM3Q9HCF6 1732 aaPredicted RBP15.28■□□□□ 0.04
SMPD4P2-201ENST00000440167 POLKQ9UBT6 870 aa15.28■□□□□ 0.04
SMPD4P2-201ENST00000440167 EMILIN1Q9Y6C2 1016 aa15.28■□□□□ 0.04
SMPD4P2-201ENST00000440167 DCCP43146 1447 aa15.28■□□□□ 0.04
SMPD4P2-201ENST00000440167 SMG6Q86US8 1419 aaKnown RBP15.27■□□□□ 0.03
SMPD4P2-201ENST00000440167 PPM1GO15355 546 aaPredicted RBP15.27■□□□□ 0.03
SMPD4P2-201ENST00000440167 AATKQ6ZMQ8 1374 aa15.26■□□□□ 0.03
SMPD4P2-201ENST00000440167 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
SMPD4P2-201ENST00000440167 ATF3P18847 181 aa15.26■□□□□ 0.03
SMPD4P2-201ENST00000440167 RRS1Q15050 365 aaKnown RBP15.26■□□□□ 0.03
SMPD4P2-201ENST00000440167 MSH6P52701 1360 aa15.26■□□□□ 0.03
SMPD4P2-201ENST00000440167 LTN1O94822 1766 aa15.26■□□□□ 0.03
SMPD4P2-201ENST00000440167 CDK12Q9NYV4 1490 aaPredicted RBP15.25■□□□□ 0.03
SMPD4P2-201ENST00000440167 NUTM2GQ5VZR2 741 aa15.25■□□□□ 0.03
SMPD4P2-201ENST00000440167 SOX12O15370 315 aa15.25■□□□□ 0.03
SMPD4P2-201ENST00000440167 USP31Q70CQ4 1352 aa15.24■□□□□ 0.03
SMPD4P2-201ENST00000440167 PNPLA6Q8IY17 1366 aa15.24■□□□□ 0.03
SMPD4P2-201ENST00000440167 XPCQ01831 940 aaPredicted RBP15.24■□□□□ 0.03
SMPD4P2-201ENST00000440167 PSME1Q06323 249 aa15.24■□□□□ 0.03
SMPD4P2-201ENST00000440167 U2SURPO15042 1029 aaKnown RBP15.23■□□□□ 0.03
SMPD4P2-201ENST00000440167 FOXO3O43524 673 aa15.23■□□□□ 0.03
SMPD4P2-201ENST00000440167 DIAPH1O60610 1272 aaKnown RBP15.22■□□□□ 0.03
SMPD4P2-201ENST00000440167 U2AF1L5P0DN76 240 aaPredicted RBP15.22■□□□□ 0.03
SMPD4P2-201ENST00000440167 NLRP6P59044 892 aa15.22■□□□□ 0.03
SMPD4P2-201ENST00000440167 U2AF1Q01081 240 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMPD4P2-201ENST00000440167 ABTB2Q8N961 1025 aa15.22■□□□□ 0.03
SMPD4P2-201ENST00000440167 ALS2Q96Q42 1657 aa15.22■□□□□ 0.03
SMPD4P2-201ENST00000440167 CADPS2Q86UW7 1296 aa15.21■□□□□ 0.03
SMPD4P2-201ENST00000440167 DMRT2Q9Y5R5 561 aa15.21■□□□□ 0.03
SMPD4P2-201ENST00000440167 IQSEC2Q5JU85 1478 aa15.21■□□□□ 0.02
SMPD4P2-201ENST00000440167 NUDCQ9Y266 331 aa15.21■□□□□ 0.02
SMPD4P2-201ENST00000440167 APAF1O14727 1248 aa15.2■□□□□ 0.02
SMPD4P2-201ENST00000440167 DDX17Q92841 729 aaKnown RBP15.19■□□□□ 0.02
SMPD4P2-201ENST00000440167 KRT28Q7Z3Y7 464 aa15.18■□□□□ 0.02
SMPD4P2-201ENST00000440167 RUNDC1Q96C34 613 aa15.18■□□□□ 0.02
SMPD4P2-201ENST00000440167 RGPD1P0DJD0 1748 aa15.18■□□□□ 0.02
SMPD4P2-201ENST00000440167 MAP3K19Q56UN5 1328 aa15.17■□□□□ 0.02
SMPD4P2-201ENST00000440167 NFAT5O94916 1531 aa15.17■□□□□ 0.02
SMPD4P2-201ENST00000440167 DLG5Q8TDM6 1919 aa15.16■□□□□ 0.02
SMPD4P2-201ENST00000440167 PLEKHG5O94827 1062 aa15.16■□□□□ 0.02
SMPD4P2-201ENST00000440167 IL13P35225 146 aa15.16■□□□□ 0.02
SMPD4P2-201ENST00000440167 CDCA7LQ96GN5 454 aa15.16■□□□□ 0.02
SMPD4P2-201ENST00000440167 RRP7AQ9Y3A4 280 aaKnown RBP15.16■□□□□ 0.02
SMPD4P2-201ENST00000440167 LMOD2Q6P5Q4 547 aa15.15■□□□□ 0.02
SMPD4P2-201ENST00000440167 PHRF1Q9P1Y6 1649 aaKnown RBP15.15■□□□□ 0.02
SMPD4P2-201ENST00000440167 SBNO1A3KN83 1393 aa15.15■□□□□ 0.02
SMPD4P2-201ENST00000440167 SLIT3O75094 1523 aa15.15■□□□□ 0.02
SMPD4P2-201ENST00000440167 NEUROD2Q15784 382 aa15.14■□□□□ 0.01
SMPD4P2-201ENST00000440167 HSP90AB2PQ58FF8 381 aa15.14■□□□□ 0.01
SMPD4P2-201ENST00000440167 TCP11L2Q8N4U5 519 aa15.14■□□□□ 0.01
SMPD4P2-201ENST00000440167 RGPD5Q99666 1765 aa15.14■□□□□ 0.01
SMPD4P2-201ENST00000440167 PXDNQ92626 1479 aa15.14■□□□□ 0.01
SMPD4P2-201ENST00000440167 ZNF521Q96K83 1311 aa15.14■□□□□ 0.01
SMPD4P2-201ENST00000440167 CRYBG1Q9Y4K1 1723 aa15.14■□□□□ 0.01
SMPD4P2-201ENST00000440167 HMOX1P09601 288 aa15.14■□□□□ 0.01
SMPD4P2-201ENST00000440167 PDE3BQ13370 1112 aa15.14■□□□□ 0.01
SMPD4P2-201ENST00000440167 EIF4A2Q14240 407 aaKnown RBP15.14■□□□□ 0.01
SMPD4P2-201ENST00000440167 PLEKHF1Q96S99 279 aa15.14■□□□□ 0.01
SMPD4P2-201ENST00000440167 SUPT16HQ9Y5B9 1047 aaKnown RBP15.14■□□□□ 0.01
SMPD4P2-201ENST00000440167 FLT4P35916 1363 aa15.13■□□□□ 0.01
SMPD4P2-201ENST00000440167 RGPD2P0DJD1 1756 aa15.13■□□□□ 0.01
SMPD4P2-201ENST00000440167 LTBP4Q8N2S1 1624 aa15.13■□□□□ 0.01
SMPD4P2-201ENST00000440167 MED1Q15648 1581 aaPredicted RBP15.13■□□□□ 0.01
SMPD4P2-201ENST00000440167 AMPHP49418 695 aa15.13■□□□□ 0.01
SMPD4P2-201ENST00000440167 BRINP3Q76B58 766 aa15.13■□□□□ 0.01
SMPD4P2-201ENST00000440167 NHSL1Q5SYE7 1610 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms