RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 RRS1Q15050 365 aaKnown RBP10.26□□□□□ -0.77
APP-209ENST00000440126 E9PSI1 815 aa10.25□□□□□ -0.77
APP-209ENST00000440126 RGS3P49796 1198 aa10.25□□□□□ -0.77
APP-209ENST00000440126 ARHGEF40Q8TER5 1519 aa10.25□□□□□ -0.77
APP-209ENST00000440126 THUMPD2Q9BTF0 503 aaKnown RBP10.25□□□□□ -0.77
APP-209ENST00000440126 TNRQ92752 1358 aa10.25□□□□□ -0.77
APP-209ENST00000440126 ABCC11Q96J66 1382 aa10.25□□□□□ -0.77
APP-209ENST00000440126 LAS1LQ9Y4W2 734 aaKnown RBP10.25□□□□□ -0.77
APP-209ENST00000440126 ATAD2Q6PL18 1390 aa10.24□□□□□ -0.77
APP-209ENST00000440126 TRMT2AQ8IZ69 625 aaKnown RBP10.24□□□□□ -0.77
APP-209ENST00000440126 AGLP35573 1532 aa10.24□□□□□ -0.77
APP-209ENST00000440126 NKTRP30414 1462 aaKnown RBP10.24□□□□□ -0.77
APP-209ENST00000440126 GLIPR1L2Q4G1C9 344 aa10.24□□□□□ -0.77
APP-209ENST00000440126 NUDT16Q96DE0 195 aaKnown RBP10.24□□□□□ -0.77
APP-209ENST00000440126 SPATA31D1Q6ZQQ2 1576 aa10.23□□□□□ -0.77
APP-209ENST00000440126 WASLO00401 505 aaPredicted RBP10.23□□□□□ -0.77
APP-209ENST00000440126 INSRP06213 1382 aa10.23□□□□□ -0.77
APP-209ENST00000440126 PAK3O75914 559 aaPredicted RBP10.23□□□□□ -0.77
APP-209ENST00000440126 TCERG1O14776 1098 aaKnown RBP10.22□□□□□ -0.77
APP-209ENST00000440126 RLBP1P12271 317 aa10.22□□□□□ -0.77
APP-209ENST00000440126 PMFBP1Q8TBY8 1022 aa10.22□□□□□ -0.77
APP-209ENST00000440126 PPIP5K1Q6PFW1 1433 aa10.22□□□□□ -0.77
APP-209ENST00000440126 PRR36Q9H6K5 1346 aa10.22□□□□□ -0.77
APP-209ENST00000440126 ROBO2Q9HCK4 1378 aa10.22□□□□□ -0.77
APP-209ENST00000440126 MAPK8IP3Q9UPT6 1336 aa10.21□□□□□ -0.77
APP-209ENST00000440126 DIAPH1O60610 1272 aaKnown RBP10.21□□□□□ -0.77
APP-209ENST00000440126 POLKQ9UBT6 870 aa10.21□□□□□ -0.77
APP-209ENST00000440126 PRKAR2BP31323 418 aa10.21□□□□□ -0.78
APP-209ENST00000440126 RIPK4P57078 832 aa10.21□□□□□ -0.78
APP-209ENST00000440126 NRXN3Q9Y4C0 1643 aa10.21□□□□□ -0.78
APP-209ENST00000440126 ELL2O00472 640 aaPredicted RBP10.2□□□□□ -0.78
APP-209ENST00000440126 TMPOP42166 694 aaKnown RBP10.2□□□□□ -0.78
APP-209ENST00000440126 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.2□□□□□ -0.78
APP-209ENST00000440126 PHACTR3Q96KR7 559 aa10.2□□□□□ -0.78
APP-209ENST00000440126 PPP6R1Q9UPN7 881 aa10.2□□□□□ -0.78
APP-209ENST00000440126 PDE4AP27815 886 aa10.2□□□□□ -0.78
APP-209ENST00000440126 EXOSC9Q06265 439 aaKnown RBP10.2□□□□□ -0.78
APP-209ENST00000440126 NLRP1Q9C000 1473 aa10.2□□□□□ -0.78
APP-209ENST00000440126 IGHDP01880 384 aa10.2□□□□□ -0.78
APP-209ENST00000440126 RARSP54136 660 aaKnown RBP10.2□□□□□ -0.78
APP-209ENST00000440126 NUTM2GQ5VZR2 741 aa10.2□□□□□ -0.78
APP-209ENST00000440126 TRIM35Q9UPQ4 493 aa10.2□□□□□ -0.78
APP-209ENST00000440126 TMEM2Q9UHN6 1383 aa10.19□□□□□ -0.78
APP-209ENST00000440126 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.19□□□□□ -0.78
APP-209ENST00000440126 PLEKHF1Q96S99 279 aa10.19□□□□□ -0.78
APP-209ENST00000440126 PAXIP1Q6ZW49 1069 aaPredicted RBP10.19□□□□□ -0.78
APP-209ENST00000440126 NOP58Q9Y2X3 529 aaKnown RBP10.19□□□□□ -0.78
APP-209ENST00000440126 IQSEC2Q5JU85 1478 aa10.19□□□□□ -0.78
APP-209ENST00000440126 REREQ9P2R6 1566 aa10.19□□□□□ -0.78
APP-209ENST00000440126 PUS7Q96PZ0 661 aaKnown RBP10.18□□□□□ -0.78
APP-209ENST00000440126 SETD1AO15047 1707 aaKnown RBP10.18□□□□□ -0.78
APP-209ENST00000440126 NSD2O96028 1365 aa10.18□□□□□ -0.78
APP-209ENST00000440126 DCTN1Q14203 1278 aa10.18□□□□□ -0.78
APP-209ENST00000440126 CCDC61Q9Y6R9 512 aa10.18□□□□□ -0.78
APP-209ENST00000440126 CPS1P31327 1500 aa10.18□□□□□ -0.78
APP-209ENST00000440126 FAM83GA6ND36 823 aa10.17□□□□□ -0.78
APP-209ENST00000440126 RTL5Q5HYW3 569 aaPredicted RBP10.17□□□□□ -0.78
APP-209ENST00000440126 USP32Q8NFA0 1604 aa10.17□□□□□ -0.78
APP-209ENST00000440126 AEBP1Q8IUX7 1158 aa10.17□□□□□ -0.78
APP-209ENST00000440126 AMOTL2Q9Y2J4 779 aa10.17□□□□□ -0.78
APP-209ENST00000440126 KDM2BQ8NHM5 1336 aa10.16□□□□□ -0.78
APP-209ENST00000440126 MAP2P11137 1827 aaKnown RBP10.16□□□□□ -0.78
APP-209ENST00000440126 ADAMTS13Q76LX8 1427 aa10.16□□□□□ -0.78
APP-209ENST00000440126 COG3Q96JB2 828 aa10.16□□□□□ -0.78
APP-209ENST00000440126 SMC4Q9NTJ3 1288 aa10.16□□□□□ -0.78
APP-209ENST00000440126 COL3A1P02461 1466 aaPredicted RBP10.16□□□□□ -0.78
APP-209ENST00000440126 ANP32AP39687 249 aaKnown RBP10.15□□□□□ -0.78
APP-209ENST00000440126 DHX37Q8IY37 1157 aaKnown RBP10.15□□□□□ -0.78
APP-209ENST00000440126 PHF23Q9BUL5 403 aaPredicted RBP10.15□□□□□ -0.78
APP-209ENST00000440126 RSPH6AQ9H0K4 717 aa10.15□□□□□ -0.78
APP-209ENST00000440126 ACEP12821 1306 aa10.15□□□□□ -0.78
APP-209ENST00000440126 NINLQ9Y2I6 1382 aa10.15□□□□□ -0.78
APP-209ENST00000440126 HDGFP51858 240 aaKnown RBP10.15□□□□□ -0.78
APP-209ENST00000440126 WDR63Q8IWG1 891 aa10.15□□□□□ -0.78
APP-209ENST00000440126 EID1Q9Y6B2 187 aa10.15□□□□□ -0.78
APP-209ENST00000440126 PTPRUQ92729 1446 aa10.15□□□□□ -0.78
APP-209ENST00000440126 UBR1Q8IWV7 1749 aa10.15□□□□□ -0.78
APP-209ENST00000440126 SLC4A3P48751 1232 aa10.15□□□□□ -0.79
APP-209ENST00000440126 SSH1Q8WYL5 1049 aa10.15□□□□□ -0.79
APP-209ENST00000440126 BACH2Q9BYV9 841 aa10.15□□□□□ -0.79
APP-209ENST00000440126 PCDHB15Q9Y5E8 787 aa10.15□□□□□ -0.79
APP-209ENST00000440126 MYH16Q9H6N6 1097 aa10.14□□□□□ -0.79
APP-209ENST00000440126 KIF20BQ96Q89 1820 aa10.14□□□□□ -0.79
APP-209ENST00000440126 NCBP3Q53F19 620 aaKnown RBP10.13□□□□□ -0.79
APP-209ENST00000440126 HSP90AB2PQ58FF8 381 aa10.13□□□□□ -0.79
APP-209ENST00000440126 CENPQQ7L2Z9 268 aaPredicted RBP10.13□□□□□ -0.79
APP-209ENST00000440126 C14orf37Q86TY3 774 aa10.13□□□□□ -0.79
APP-209ENST00000440126 FTSJ3Q8IY81 847 aaKnown RBP10.13□□□□□ -0.79
APP-209ENST00000440126 TSPYL6Q8N831 410 aa10.13□□□□□ -0.79
APP-209ENST00000440126 LRRC7Q96NW7 1537 aa10.13□□□□□ -0.79
APP-209ENST00000440126 ZBTB7CA1YPR0 619 aa10.12□□□□□ -0.79
APP-209ENST00000440126 KCNA6P17658 529 aa10.12□□□□□ -0.79
APP-209ENST00000440126 IL13P35225 146 aa10.12□□□□□ -0.79
APP-209ENST00000440126 KRT24Q2M2I5 525 aa10.12□□□□□ -0.79
APP-209ENST00000440126 NGDNQ8NEJ9 315 aaKnown RBP10.12□□□□□ -0.79
APP-209ENST00000440126 NOB1Q9ULX3 412 aaKnown RBP10.12□□□□□ -0.79
APP-209ENST00000440126 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.12□□□□□ -0.79
APP-209ENST00000440126 ATP7BP35670 1465 aa10.12□□□□□ -0.79
APP-209ENST00000440126 CPSF1Q10570 1443 aaKnown RBP10.12□□□□□ -0.79
APP-209ENST00000440126 SULT6B1Q6IMI4 303 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms