RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 CEBPZQ03701 1054 aaKnown RBP17.56■□□□□ 0.4
PCNX1-202ENST00000439984 CAGE1Q8TC20 777 aa17.56■□□□□ 0.4
PCNX1-202ENST00000439984 IPO4Q8TEX9 1081 aaKnown RBP17.56■□□□□ 0.4
PCNX1-202ENST00000439984 HECW1Q76N89 1606 aa17.55■□□□□ 0.4
PCNX1-202ENST00000439984 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.55■□□□□ 0.4
PCNX1-202ENST00000439984 FILIP1Q7Z7B0 1213 aa17.55■□□□□ 0.4
PCNX1-202ENST00000439984 EPRSP07814 1512 aaKnown RBP17.55■□□□□ 0.4
PCNX1-202ENST00000439984 NECTIN2Q92692 538 aa17.54■□□□□ 0.4
PCNX1-202ENST00000439984 WASHC2CQ9Y4E1 1318 aa17.54■□□□□ 0.4
PCNX1-202ENST00000439984 CCDC191Q8NCU4 936 aa17.54■□□□□ 0.4
PCNX1-202ENST00000439984 USP25Q9UHP3 1055 aa17.54■□□□□ 0.4
PCNX1-202ENST00000439984 TIGD1Q96MW7 591 aa17.54■□□□□ 0.4
PCNX1-202ENST00000439984 TNMDQ9H2S6 317 aa17.54■□□□□ 0.4
PCNX1-202ENST00000439984 TNNT1P13805 278 aa17.54■□□□□ 0.4
PCNX1-202ENST00000439984 CENPHQ9H3R5 247 aa17.54■□□□□ 0.4
PCNX1-202ENST00000439984 API5Q9BZZ5 524 aaKnown RBP17.53■□□□□ 0.4
PCNX1-202ENST00000439984 SNAPC4Q5SXM2 1469 aa17.53■□□□□ 0.4
PCNX1-202ENST00000439984 C16orf45Q96MC5 204 aaPredicted RBP17.53■□□□□ 0.4
PCNX1-202ENST00000439984 CUL7Q14999 1698 aa17.53■□□□□ 0.4
PCNX1-202ENST00000439984 VGLL3A8MV65 326 aa17.53■□□□□ 0.4
PCNX1-202ENST00000439984 KIAA0754O94854 1291 aa17.52■□□□□ 0.4
PCNX1-202ENST00000439984 IFT140Q96RY7 1462 aa17.52■□□□□ 0.4
PCNX1-202ENST00000439984 RRP12Q5JTH9 1297 aaKnown RBP17.52■□□□□ 0.4
PCNX1-202ENST00000439984 ZNF830Q96NB3 372 aaPredicted RBP17.52■□□□□ 0.4
PCNX1-202ENST00000439984 DAPK1P53355 1430 aa17.52■□□□□ 0.4
PCNX1-202ENST00000439984 CT47B1P0C2W7 299 aaPredicted RBP17.52■□□□□ 0.4
PCNX1-202ENST00000439984 CCDC102AQ96A19 550 aa17.52■□□□□ 0.39
PCNX1-202ENST00000439984 TERF2IPQ9NYB0 399 aa17.52■□□□□ 0.39
PCNX1-202ENST00000439984 RBM27Q9P2N5 1060 aaKnown RBP17.52■□□□□ 0.39
PCNX1-202ENST00000439984 NAP1L1P55209 391 aaKnown RBP17.52■□□□□ 0.39
PCNX1-202ENST00000439984 FAM193AP78312 1265 aa17.52■□□□□ 0.39
PCNX1-202ENST00000439984 NGEFQ8N5V2 710 aa17.52■□□□□ 0.39
PCNX1-202ENST00000439984 ZNF330Q9Y3S2 320 aaPredicted RBP17.51■□□□□ 0.39
PCNX1-202ENST00000439984 TMCO3Q6UWJ1 677 aa17.51■□□□□ 0.39
PCNX1-202ENST00000439984 URB2Q14146 1524 aaKnown RBP17.51■□□□□ 0.39
PCNX1-202ENST00000439984 IRX3P78415 501 aaPredicted RBP17.5■□□□□ 0.39
PCNX1-202ENST00000439984 KINO60870 393 aaKnown RBP17.5■□□□□ 0.39
PCNX1-202ENST00000439984 CDR1P51861 262 aa17.5■□□□□ 0.39
PCNX1-202ENST00000439984 UBXN4Q92575 508 aa17.5■□□□□ 0.39
PCNX1-202ENST00000439984 PPP2R1AP30153 589 aa17.5■□□□□ 0.39
PCNX1-202ENST00000439984 GIMAP7Q8NHV1 300 aa17.5■□□□□ 0.39
PCNX1-202ENST00000439984 TROQ12816 1431 aaPredicted RBP17.5■□□□□ 0.39
PCNX1-202ENST00000439984 NBPF1Q3BBV0 1214 aa17.49■□□□□ 0.39
PCNX1-202ENST00000439984 TCP11L2Q8N4U5 519 aa17.49■□□□□ 0.39
PCNX1-202ENST00000439984 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
PCNX1-202ENST00000439984 CCP110O43303 1012 aa17.49■□□□□ 0.39
PCNX1-202ENST00000439984 NOL10Q9BSC4 688 aaKnown RBP17.49■□□□□ 0.39
PCNX1-202ENST00000439984 NOB1Q9ULX3 412 aaKnown RBP17.49■□□□□ 0.39
PCNX1-202ENST00000439984 OLFM4Q6UX06 510 aa17.49■□□□□ 0.39
PCNX1-202ENST00000439984 ANKRD20A12PQ8NF67 263 aa17.49■□□□□ 0.39
PCNX1-202ENST00000439984 WDR33Q9C0J8 1336 aaKnown RBP17.49■□□□□ 0.39
PCNX1-202ENST00000439984 CPLX1O14810 134 aa17.49■□□□□ 0.39
PCNX1-202ENST00000439984 EXOSC9Q06265 439 aaKnown RBP17.49■□□□□ 0.39
PCNX1-202ENST00000439984 CCDC94Q9BW85 323 aaPredicted RBP17.49■□□□□ 0.39
PCNX1-202ENST00000439984 MCM2P49736 904 aa17.48■□□□□ 0.39
PCNX1-202ENST00000439984 FAM177BA6PVY3 158 aa17.48■□□□□ 0.39
PCNX1-202ENST00000439984 CAMK4Q16566 473 aa17.48■□□□□ 0.39
PCNX1-202ENST00000439984 TSR2Q969E8 191 aaKnown RBP17.48■□□□□ 0.39
PCNX1-202ENST00000439984 CEP89Q96ST8 783 aa17.48■□□□□ 0.39
PCNX1-202ENST00000439984 USP8P40818 1118 aa17.48■□□□□ 0.39
PCNX1-202ENST00000439984 RNF20Q5VTR2 975 aa17.48■□□□□ 0.39
PCNX1-202ENST00000439984 PTPN14Q15678 1187 aa17.48■□□□□ 0.39
PCNX1-202ENST00000439984 EIF3JO75822 258 aaKnown RBP17.48■□□□□ 0.39
PCNX1-202ENST00000439984 IQGAP2Q13576 1575 aa17.47■□□□□ 0.39
PCNX1-202ENST00000439984 PTPN23Q9H3S7 1636 aa17.47■□□□□ 0.39
PCNX1-202ENST00000439984 KDM4AO75164 1064 aa17.47■□□□□ 0.39
PCNX1-202ENST00000439984 IFIT2P09913 472 aaKnown RBP17.47■□□□□ 0.39
PCNX1-202ENST00000439984 DNAJC2Q99543 621 aaKnown RBP17.47■□□□□ 0.39
PCNX1-202ENST00000439984 GTF2A1P52655 376 aaPredicted RBP17.47■□□□□ 0.39
PCNX1-202ENST00000439984 CHD1LQ86WJ1 897 aa17.47■□□□□ 0.39
PCNX1-202ENST00000439984 KIAA1107Q9UPP5 1409 aa17.47■□□□□ 0.39
PCNX1-202ENST00000439984 SYNE3Q6ZMZ3 975 aa17.46■□□□□ 0.39
PCNX1-202ENST00000439984 HOOK1Q9UJC3 728 aaKnown RBP17.46■□□□□ 0.39
PCNX1-202ENST00000439984 SMAP1Q8IYB5 467 aaPredicted RBP17.46■□□□□ 0.39
PCNX1-202ENST00000439984 TRIM29Q14134 588 aa17.46■□□□□ 0.39
PCNX1-202ENST00000439984 GTPBP4Q9BZE4 634 aaKnown RBP17.46■□□□□ 0.39
PCNX1-202ENST00000439984 BRPF1P55201 1214 aaPredicted RBP17.45■□□□□ 0.38
PCNX1-202ENST00000439984 SERPINC1P01008 464 aa17.45■□□□□ 0.38
PCNX1-202ENST00000439984 TRMT1Q9NXH9 659 aaKnown RBP17.45■□□□□ 0.38
PCNX1-202ENST00000439984 C9orf84Q5VXU9 1444 aa17.45■□□□□ 0.38
PCNX1-202ENST00000439984 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
PCNX1-202ENST00000439984 MVPQ14764 893 aaKnown RBP17.45■□□□□ 0.38
PCNX1-202ENST00000439984 PRIMPOLQ96LW4 560 aa17.44■□□□□ 0.38
PCNX1-202ENST00000439984 ROCK1Q13464 1354 aa17.44■□□□□ 0.38
PCNX1-202ENST00000439984 ADCY5O95622 1261 aa17.44■□□□□ 0.38
PCNX1-202ENST00000439984 MCM5P33992 734 aa17.44■□□□□ 0.38
PCNX1-202ENST00000439984 NUP62CLQ9H1M0 184 aa17.44■□□□□ 0.38
PCNX1-202ENST00000439984 ERLIN1O75477 346 aa17.44■□□□□ 0.38
PCNX1-202ENST00000439984 ZSCAN23Q3MJ62 389 aa17.44■□□□□ 0.38
PCNX1-202ENST00000439984 OFD1O75665 1012 aa17.44■□□□□ 0.38
PCNX1-202ENST00000439984 GCC1Q96CN9 775 aa17.44■□□□□ 0.38
PCNX1-202ENST00000439984 KIAA0586Q9BVV6 1533 aa17.43■□□□□ 0.38
PCNX1-202ENST00000439984 ERC2O15083 957 aa17.43■□□□□ 0.38
PCNX1-202ENST00000439984 HDAC5Q9UQL6 1122 aa17.43■□□□□ 0.38
PCNX1-202ENST00000439984 AFAP1Q8N556 730 aa17.43■□□□□ 0.38
PCNX1-202ENST00000439984 MAPKBP1O60336 1514 aa17.43■□□□□ 0.38
PCNX1-202ENST00000439984 SYNJ2O15056 1496 aa17.43■□□□□ 0.38
PCNX1-202ENST00000439984 DIAPH1O60610 1272 aaKnown RBP17.43■□□□□ 0.38
PCNX1-202ENST00000439984 ARHGAP5Q13017 1502 aa17.42■□□□□ 0.38
PCNX1-202ENST00000439984 STK3Q13188 491 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms