RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 RGPD8O14715 1765 aaPredicted RBP10.23□□□□□ -0.77
UBR3-205ENST00000439681 BRD4O60885 1362 aaPredicted RBP10.22□□□□□ -0.77
UBR3-205ENST00000439681 GGNBP2Q9H3C7 697 aa10.22□□□□□ -0.77
UBR3-205ENST00000439681 PRKRIP1Q9H875 184 aaPredicted RBP10.22□□□□□ -0.77
UBR3-205ENST00000439681 NPHP3Q7Z494 1330 aa10.22□□□□□ -0.77
UBR3-205ENST00000439681 SOS2Q07890 1332 aaPredicted RBP10.22□□□□□ -0.77
UBR3-205ENST00000439681 TTC21AQ8NDW8 1320 aa10.22□□□□□ -0.77
UBR3-205ENST00000439681 ANP32CO43423 234 aa10.21□□□□□ -0.77
UBR3-205ENST00000439681 PIP4K2BP78356 416 aa10.21□□□□□ -0.77
UBR3-205ENST00000439681 MIER1Q8N108 512 aa10.21□□□□□ -0.77
UBR3-205ENST00000439681 ITSN1Q15811 1721 aa10.21□□□□□ -0.78
UBR3-205ENST00000439681 PAK3O75914 559 aaPredicted RBP10.21□□□□□ -0.78
UBR3-205ENST00000439681 PXDNQ92626 1479 aa10.2□□□□□ -0.78
UBR3-205ENST00000439681 SBNO1A3KN83 1393 aa10.2□□□□□ -0.78
UBR3-205ENST00000439681 NSD2O96028 1365 aa10.2□□□□□ -0.78
UBR3-205ENST00000439681 PARD3Q8TEW0 1356 aa10.2□□□□□ -0.78
UBR3-205ENST00000439681 RALBP1Q15311 655 aa10.19□□□□□ -0.78
UBR3-205ENST00000439681 ABTB2Q8N961 1025 aa10.19□□□□□ -0.78
UBR3-205ENST00000439681 USP31Q70CQ4 1352 aa10.19□□□□□ -0.78
UBR3-205ENST00000439681 KIF1AQ12756 1690 aa10.19□□□□□ -0.78
UBR3-205ENST00000439681 MORC1Q86VD1 984 aa10.19□□□□□ -0.78
UBR3-205ENST00000439681 SPATA31A3Q5VYP0 1347 aa10.19□□□□□ -0.78
UBR3-205ENST00000439681 AKAP12Q02952 1782 aa10.19□□□□□ -0.78
UBR3-205ENST00000439681 NLRP6P59044 892 aa10.18□□□□□ -0.78
UBR3-205ENST00000439681 NUTM2GQ5VZR2 741 aa10.18□□□□□ -0.78
UBR3-205ENST00000439681 MON2Q7Z3U7 1717 aa10.18□□□□□ -0.78
UBR3-205ENST00000439681 COG3Q96JB2 828 aa10.18□□□□□ -0.78
UBR3-205ENST00000439681 NRKQ7Z2Y5 1582 aa10.17□□□□□ -0.78
UBR3-205ENST00000439681 FBLN1P23142 703 aa10.17□□□□□ -0.78
UBR3-205ENST00000439681 SCAF1Q9H7N4 1312 aaKnown RBP10.17□□□□□ -0.78
UBR3-205ENST00000439681 OVOS2A0A0J9YW53 1432 aa10.16□□□□□ -0.78
UBR3-205ENST00000439681 PPP2R1AP30153 589 aa10.16□□□□□ -0.78
UBR3-205ENST00000439681 TNNT2P45379 298 aaPredicted RBP10.16□□□□□ -0.78
UBR3-205ENST00000439681 OVOS2Q6IE36 1432 aa10.16□□□□□ -0.78
UBR3-205ENST00000439681 ROBO1Q9Y6N7 1651 aa10.16□□□□□ -0.78
UBR3-205ENST00000439681 LMOD2Q6P5Q4 547 aa10.16□□□□□ -0.78
UBR3-205ENST00000439681 NLRP13Q86W25 1043 aa10.16□□□□□ -0.78
UBR3-205ENST00000439681 TNS3Q68CZ2 1445 aa10.15□□□□□ -0.78
UBR3-205ENST00000439681 LRRC59Q96AG4 307 aaKnown RBP10.15□□□□□ -0.78
UBR3-205ENST00000439681 MYBBP1AQ9BQG0 1328 aaKnown RBP10.15□□□□□ -0.78
UBR3-205ENST00000439681 TRPM3Q9HCF6 1732 aaPredicted RBP10.15□□□□□ -0.78
UBR3-205ENST00000439681 AHDC1Q5TGY3 1603 aaPredicted RBP10.15□□□□□ -0.79
UBR3-205ENST00000439681 USP19O94966 1318 aa10.14□□□□□ -0.79
UBR3-205ENST00000439681 CCDC184Q52MB2 194 aa10.14□□□□□ -0.79
UBR3-205ENST00000439681 ARHGEF10O15013 1369 aa10.14□□□□□ -0.79
UBR3-205ENST00000439681 POLKQ9UBT6 870 aa10.14□□□□□ -0.79
UBR3-205ENST00000439681 PIK3C2AO00443 1686 aa10.13□□□□□ -0.79
UBR3-205ENST00000439681 NHSL1Q5SYE7 1610 aa10.13□□□□□ -0.79
UBR3-205ENST00000439681 AATKQ6ZMQ8 1374 aa10.13□□□□□ -0.79
UBR3-205ENST00000439681 GCP02774 474 aa10.13□□□□□ -0.79
UBR3-205ENST00000439681 CABLES1Q8TDN4 633 aa10.13□□□□□ -0.79
UBR3-205ENST00000439681 CCER2I3L3R5 266 aa10.12□□□□□ -0.79
UBR3-205ENST00000439681 MTHFSP49914 203 aa10.12□□□□□ -0.79
UBR3-205ENST00000439681 SOX12O15370 315 aa10.12□□□□□ -0.79
UBR3-205ENST00000439681 PLEKHG5O94827 1062 aa10.12□□□□□ -0.79
UBR3-205ENST00000439681 RRS1Q15050 365 aaKnown RBP10.12□□□□□ -0.79
UBR3-205ENST00000439681 HSPA1LP34931 641 aa10.11□□□□□ -0.79
UBR3-205ENST00000439681 KCNH5Q8NCM2 988 aa10.11□□□□□ -0.79
UBR3-205ENST00000439681 EMILIN1Q9Y6C2 1016 aa10.11□□□□□ -0.79
UBR3-205ENST00000439681 ALS2Q96Q42 1657 aa10.11□□□□□ -0.79
UBR3-205ENST00000439681 PNPLA6Q8IY17 1366 aa10.11□□□□□ -0.79
UBR3-205ENST00000439681 MED1Q15648 1581 aaPredicted RBP10.11□□□□□ -0.79
UBR3-205ENST00000439681 MAP3K19Q56UN5 1328 aa10.1□□□□□ -0.79
UBR3-205ENST00000439681 SLIT3O75094 1523 aa10.1□□□□□ -0.79
UBR3-205ENST00000439681 ARHGEF25Q86VW2 580 aa10.1□□□□□ -0.79
UBR3-205ENST00000439681 COL16A1Q07092 1604 aaPredicted RBP10.1□□□□□ -0.79
UBR3-205ENST00000439681 KIF20BQ96Q89 1820 aa10.1□□□□□ -0.79
UBR3-205ENST00000439681 USP54Q70EL1 1684 aa10.08□□□□□ -0.8
UBR3-205ENST00000439681 INSRP06213 1382 aa10.08□□□□□ -0.8
UBR3-205ENST00000439681 ZC3H6P61129 1189 aaKnown RBP10.08□□□□□ -0.8
UBR3-205ENST00000439681 MRS2Q9HD23 443 aa10.08□□□□□ -0.8
UBR3-205ENST00000439681 MARF1Q9Y4F3 1742 aaKnown RBP10.08□□□□□ -0.8
UBR3-205ENST00000439681 NFAT5O94916 1531 aa10.08□□□□□ -0.8
UBR3-205ENST00000439681 SMG6Q86US8 1419 aaKnown RBP10.08□□□□□ -0.8
UBR3-205ENST00000439681 PPM1GO15355 546 aaPredicted RBP10.08□□□□□ -0.8
UBR3-205ENST00000439681 ANKRD26Q9UPS8 1709 aa10.07□□□□□ -0.8
UBR3-205ENST00000439681 HSP90AB2PQ58FF8 381 aa10.07□□□□□ -0.8
UBR3-205ENST00000439681 PNISRQ8TF01 805 aaKnown RBP10.07□□□□□ -0.8
UBR3-205ENST00000439681 PHLPP1O60346 1717 aa10.07□□□□□ -0.8
UBR3-205ENST00000439681 JCADQ9P266 1359 aa10.07□□□□□ -0.8
UBR3-205ENST00000439681 HOXC9P31274 260 aa10.07□□□□□ -0.8
UBR3-205ENST00000439681 FBXO41Q8TF61 875 aa10.07□□□□□ -0.8
UBR3-205ENST00000439681 IP6K1Q92551 441 aa10.07□□□□□ -0.8
UBR3-205ENST00000439681 CPDO75976 1380 aa10.06□□□□□ -0.8
UBR3-205ENST00000439681 AMPHP49418 695 aa10.06□□□□□ -0.8
UBR3-205ENST00000439681 AXIN2Q9Y2T1 843 aa10.06□□□□□ -0.8
UBR3-205ENST00000439681 KIF24Q5T7B8 1368 aa10.06□□□□□ -0.8
UBR3-205ENST00000439681 KIAA0232Q92628 1395 aa10.06□□□□□ -0.8
UBR3-205ENST00000439681 FAM83GA6ND36 823 aa10.05□□□□□ -0.8
UBR3-205ENST00000439681 IL13P35225 146 aa10.05□□□□□ -0.8
UBR3-205ENST00000439681 CFAP53Q96M91 514 aa10.05□□□□□ -0.8
UBR3-205ENST00000439681 ZBTB7CA1YPR0 619 aa10.05□□□□□ -0.8
UBR3-205ENST00000439681 HAP1P54257 671 aaPredicted RBP10.05□□□□□ -0.8
UBR3-205ENST00000439681 CHRNA2Q15822 529 aa10.05□□□□□ -0.8
UBR3-205ENST00000439681 FLT4P35916 1363 aa10.05□□□□□ -0.8
UBR3-205ENST00000439681 COL3A1P02461 1466 aaPredicted RBP10.04□□□□□ -0.8
UBR3-205ENST00000439681 EIF4A2Q14240 407 aaKnown RBP10.04□□□□□ -0.8
UBR3-205ENST00000439681 CDK12Q9NYV4 1490 aaPredicted RBP10.04□□□□□ -0.8
UBR3-205ENST00000439681 COL22A1Q8NFW1 1626 aaPredicted RBP10.04□□□□□ -0.8
UBR3-205ENST00000439681 NUTM2BA6NNL0 878 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms