RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 ARHGEF28Q8N1W1 1705 aaKnown RBP19.41■□□□□ 0.7
CDC42EP4-202ENST00000439510 PODXL2Q9NZ53 605 aa19.39■□□□□ 0.7
CDC42EP4-202ENST00000439510 ANKRD36BQ8N2N9 1353 aa19.39■□□□□ 0.69
CDC42EP4-202ENST00000439510 IDI1Q13907 227 aa19.39■□□□□ 0.69
CDC42EP4-202ENST00000439510 ZKSCAN2Q63HK3 967 aa19.38■□□□□ 0.69
CDC42EP4-202ENST00000439510 TULP4Q9NRJ4 1543 aa19.38■□□□□ 0.69
CDC42EP4-202ENST00000439510 CEBPAP49715 358 aaPredicted RBP19.38■□□□□ 0.69
CDC42EP4-202ENST00000439510 L1TD1Q5T7N2 865 aaKnown RBP19.38■□□□□ 0.69
CDC42EP4-202ENST00000439510 ARHGAP31Q2M1Z3 1444 aa19.38■□□□□ 0.69
CDC42EP4-202ENST00000439510 MYO5BQ9ULV0 1848 aa19.37■□□□□ 0.69
CDC42EP4-202ENST00000439510 RPGRIP1LQ68CZ1 1315 aa19.37■□□□□ 0.69
CDC42EP4-202ENST00000439510 DZIP1LQ8IYY4 767 aaKnown RBP19.36■□□□□ 0.69
CDC42EP4-202ENST00000439510 HDAC1Q13547 482 aaPredicted RBP19.35■□□□□ 0.69
CDC42EP4-202ENST00000439510 FTSJ3Q8IY81 847 aaKnown RBP19.34■□□□□ 0.69
CDC42EP4-202ENST00000439510 U2AF1L5P0DN76 240 aaPredicted RBP19.34■□□□□ 0.69
CDC42EP4-202ENST00000439510 U2AF1Q01081 240 aaKnown RBP eCLIP19.34■□□□□ 0.69
CDC42EP4-202ENST00000439510 TMEM132EQ6IEE7 984 aa19.34■□□□□ 0.69
CDC42EP4-202ENST00000439510 EVC2Q86UK5 1308 aa19.33■□□□□ 0.69
CDC42EP4-202ENST00000439510 PPP6R1Q9UPN7 881 aa19.33■□□□□ 0.69
CDC42EP4-202ENST00000439510 PIK3C2BO00750 1634 aa19.33■□□□□ 0.68
CDC42EP4-202ENST00000439510 COL3A1P02461 1466 aaPredicted RBP19.32■□□□□ 0.68
CDC42EP4-202ENST00000439510 C22orf23Q9BZE7 217 aa19.31■□□□□ 0.68
CDC42EP4-202ENST00000439510 RSPH6AQ9H0K4 717 aa19.31■□□□□ 0.68
CDC42EP4-202ENST00000439510 ANKRD26Q9UPS8 1709 aa19.31■□□□□ 0.68
CDC42EP4-202ENST00000439510 PLEKHF1Q96S99 279 aa19.31■□□□□ 0.68
CDC42EP4-202ENST00000439510 FER1L4A9Z1Z3 1794 aa19.31■□□□□ 0.68
CDC42EP4-202ENST00000439510 TRIM27P14373 513 aa19.3■□□□□ 0.68
CDC42EP4-202ENST00000439510 STAG3Q9UJ98 1225 aa19.3■□□□□ 0.68
CDC42EP4-202ENST00000439510 MCM4P33991 863 aa19.3■□□□□ 0.68
CDC42EP4-202ENST00000439510 ABCC11Q96J66 1382 aa19.3■□□□□ 0.68
CDC42EP4-202ENST00000439510 DDX19BQ9UMR2 479 aa19.3■□□□□ 0.68
CDC42EP4-202ENST00000439510 NEXMIFQ5QGS0 1516 aa19.29■□□□□ 0.68
CDC42EP4-202ENST00000439510 FSD2A1L4K1 749 aa19.29■□□□□ 0.68
CDC42EP4-202ENST00000439510 TSR2Q969E8 191 aaKnown RBP19.29■□□□□ 0.68
CDC42EP4-202ENST00000439510 SMC4Q9NTJ3 1288 aa19.29■□□□□ 0.68
CDC42EP4-202ENST00000439510 SMC5Q8IY18 1101 aa19.29■□□□□ 0.68
CDC42EP4-202ENST00000439510 IL16Q14005 1332 aa19.28■□□□□ 0.68
CDC42EP4-202ENST00000439510 CHMP5Q9NZZ3 219 aa19.28■□□□□ 0.68
CDC42EP4-202ENST00000439510 EXOSC9Q06265 439 aaKnown RBP19.28■□□□□ 0.68
CDC42EP4-202ENST00000439510 SLC52A1Q9NWF4 448 aa19.28■□□□□ 0.68
CDC42EP4-202ENST00000439510 ATF7IPQ6VMQ6 1270 aa19.27■□□□□ 0.68
CDC42EP4-202ENST00000439510 TRIM35Q9UPQ4 493 aa19.27■□□□□ 0.68
CDC42EP4-202ENST00000439510 TMPOP42166 694 aaKnown RBP19.27■□□□□ 0.68
CDC42EP4-202ENST00000439510 SSH1Q8WYL5 1049 aa19.27■□□□□ 0.68
CDC42EP4-202ENST00000439510 SPATA31D1Q6ZQQ2 1576 aa19.26■□□□□ 0.67
CDC42EP4-202ENST00000439510 NCOA3Q9Y6Q9 1424 aa19.26■□□□□ 0.67
CDC42EP4-202ENST00000439510 MFAP1P55081 439 aaKnown RBP19.26■□□□□ 0.67
CDC42EP4-202ENST00000439510 MED14O60244 1454 aa19.26■□□□□ 0.67
CDC42EP4-202ENST00000439510 A0A1W2PP64 1363 aa19.25■□□□□ 0.67
CDC42EP4-202ENST00000439510 TMEM131LA2VDJ0 1609 aa19.25■□□□□ 0.67
CDC42EP4-202ENST00000439510 GOLGA6L3A6NEY3 463 aa19.24■□□□□ 0.67
CDC42EP4-202ENST00000439510 ITPRIPQ8IWB1 547 aa19.24■□□□□ 0.67
CDC42EP4-202ENST00000439510 C3P01024 1663 aa19.24■□□□□ 0.67
CDC42EP4-202ENST00000439510 XRCC6P12956 609 aaKnown RBP eCLIP19.24■□□□□ 0.67
CDC42EP4-202ENST00000439510 PKNOX2Q96KN3 472 aa19.24■□□□□ 0.67
CDC42EP4-202ENST00000439510 RRAGDQ9NQL2 400 aaPredicted RBP19.24■□□□□ 0.67
CDC42EP4-202ENST00000439510 ZBTB40Q9NUA8 1239 aa19.23■□□□□ 0.67
CDC42EP4-202ENST00000439510 CABP2Q9NPB3 220 aa19.23■□□□□ 0.67
CDC42EP4-202ENST00000439510 VGFO15240 615 aaPredicted RBP19.22■□□□□ 0.67
CDC42EP4-202ENST00000439510 SPRYD3Q8NCJ5 442 aa19.22■□□□□ 0.67
CDC42EP4-202ENST00000439510 ZNF692Q9BU19 519 aaPredicted RBP19.22■□□□□ 0.67
CDC42EP4-202ENST00000439510 NOB1Q9ULX3 412 aaKnown RBP19.22■□□□□ 0.67
CDC42EP4-202ENST00000439510 RIMS1Q86UR5 1692 aaKnown RBP19.21■□□□□ 0.67
CDC42EP4-202ENST00000439510 KIF16BQ96L93 1317 aa19.21■□□□□ 0.67
CDC42EP4-202ENST00000439510 RBM25P49756 843 aaKnown RBP19.21■□□□□ 0.67
CDC42EP4-202ENST00000439510 TNRQ92752 1358 aa19.21■□□□□ 0.67
CDC42EP4-202ENST00000439510 DDIT3P35638 169 aa19.21■□□□□ 0.67
CDC42EP4-202ENST00000439510 TMEM57Q8N5G2 664 aa19.21■□□□□ 0.67
CDC42EP4-202ENST00000439510 U2SURPO15042 1029 aaKnown RBP19.2■□□□□ 0.66
CDC42EP4-202ENST00000439510 HSCBQ8IWL3 235 aa19.2■□□□□ 0.66
CDC42EP4-202ENST00000439510 ZFYVE9O95405 1425 aa19.2■□□□□ 0.66
CDC42EP4-202ENST00000439510 TRAK2O60296 914 aa19.2■□□□□ 0.66
CDC42EP4-202ENST00000439510 NUCB1Q02818 461 aa19.19■□□□□ 0.66
CDC42EP4-202ENST00000439510 CDC42BPGQ6DT37 1551 aa19.19■□□□□ 0.66
CDC42EP4-202ENST00000439510 SNX21Q969T3 373 aa19.19■□□□□ 0.66
CDC42EP4-202ENST00000439510 IPO8O15397 1037 aaKnown RBP19.18■□□□□ 0.66
CDC42EP4-202ENST00000439510 CD163L1Q9NR16 1453 aa19.18■□□□□ 0.66
CDC42EP4-202ENST00000439510 DDX11L8A8MPP1 907 aa19.18■□□□□ 0.66
CDC42EP4-202ENST00000439510 PNPLA6Q8IY17 1366 aa19.18■□□□□ 0.66
CDC42EP4-202ENST00000439510 ALDH1L2Q3SY69 923 aa19.18■□□□□ 0.66
CDC42EP4-202ENST00000439510 GGNBP2Q9H3C7 697 aa19.17■□□□□ 0.66
CDC42EP4-202ENST00000439510 KIF20BQ96Q89 1820 aa19.17■□□□□ 0.66
CDC42EP4-202ENST00000439510 A2ML1A8K2U0 1454 aa19.16■□□□□ 0.66
CDC42EP4-202ENST00000439510 PTPRMP28827 1452 aa19.16■□□□□ 0.66
CDC42EP4-202ENST00000439510 ATAD2Q6PL18 1390 aa19.16■□□□□ 0.66
CDC42EP4-202ENST00000439510 RIPK4P57078 832 aa19.16■□□□□ 0.66
CDC42EP4-202ENST00000439510 FYB1O15117 783 aa19.15■□□□□ 0.66
CDC42EP4-202ENST00000439510 BRPF1P55201 1214 aaPredicted RBP19.15■□□□□ 0.66
CDC42EP4-202ENST00000439510 GZF1Q9H116 711 aaPredicted RBP19.15■□□□□ 0.66
CDC42EP4-202ENST00000439510 PPIP5K1Q6PFW1 1433 aa19.15■□□□□ 0.66
CDC42EP4-202ENST00000439510 PNNQ9H307 717 aaKnown RBP19.15■□□□□ 0.66
CDC42EP4-202ENST00000439510 MRE11P49959 708 aa19.15■□□□□ 0.66
CDC42EP4-202ENST00000439510 ISY1Q9ULR0 285 aaKnown RBP19.15■□□□□ 0.66
CDC42EP4-202ENST00000439510 PANK2Q9BZ23 570 aa19.14■□□□□ 0.65
CDC42EP4-202ENST00000439510 CHD1LQ86WJ1 897 aa19.14■□□□□ 0.65
CDC42EP4-202ENST00000439510 LRRC7Q96NW7 1537 aa19.14■□□□□ 0.65
CDC42EP4-202ENST00000439510 ZNF428Q96B54 188 aa19.13■□□□□ 0.65
CDC42EP4-202ENST00000439510 TERF2IPQ9NYB0 399 aa19.13■□□□□ 0.65
CDC42EP4-202ENST00000439510 CIZ1Q9ULV3 898 aaPredicted RBP19.13■□□□□ 0.65
CDC42EP4-202ENST00000439510 SRPK2P78362 688 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms