RNA–Protein interactions for RNA: ENST00000439372.5

ATP6AP1-204, Transcript of ATPase H+ transporting accessory protein 1, human

TSL 4

Gene ATP6AP1, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6AP1-204	ENST00000439372	NINL	Q9Y2I6	1382 aa		32.09	■■■□□ 2.73
ATP6AP1-204	ENST00000439372	SPATA31A6	Q5VVP1	1343 aa		32.09	■■■□□ 2.73
ATP6AP1-204	ENST00000439372	SSH2	Q76I76	1423 aa		32.08	■■■□□ 2.73
ATP6AP1-204	ENST00000439372	ABCA3	Q99758	1704 aa		32.07	■■■□□ 2.72
ATP6AP1-204	ENST00000439372	POLR3GL	Q9BT43	218 aa		32.07	■■■□□ 2.72
ATP6AP1-204	ENST00000439372		A0A1W2PP64	1363 aa		32.07	■■■□□ 2.72
ATP6AP1-204	ENST00000439372	ARHGEF10	O15013	1369 aa		32.07	■■■□□ 2.72
ATP6AP1-204	ENST00000439372	KTN1	Q86UP2	1357 aa	Known RBP	32.07	■■■□□ 2.72
ATP6AP1-204	ENST00000439372	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.06	■■■□□ 2.72
ATP6AP1-204	ENST00000439372	NUTM2E	B1AL46	878 aa	Predicted RBP	32.06	■■■□□ 2.72
ATP6AP1-204	ENST00000439372	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.06	■■■□□ 2.72
ATP6AP1-204	ENST00000439372	ZNF692	Q9BU19	519 aa	Predicted RBP	32.06	■■■□□ 2.72
ATP6AP1-204	ENST00000439372	CRYBG1	Q9Y4K1	1723 aa		32.04	■■■□□ 2.72
ATP6AP1-204	ENST00000439372	BRD4	O60885	1362 aa	Predicted RBP	32.04	■■■□□ 2.72
ATP6AP1-204	ENST00000439372	PLEKHG5	O94827	1062 aa		32.03	■■■□□ 2.72
ATP6AP1-204	ENST00000439372	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.03	■■■□□ 2.72
ATP6AP1-204	ENST00000439372	PIK3C2A	O00443	1686 aa		32.02	■■■□□ 2.72
ATP6AP1-204	ENST00000439372	TERF2IP	Q9NYB0	399 aa		32.02	■■■□□ 2.72
ATP6AP1-204	ENST00000439372	TTC21B	Q7Z4L5	1316 aa		32	■■■□□ 2.71
ATP6AP1-204	ENST00000439372	ANKRD36B	Q8N2N9	1353 aa		32	■■■□□ 2.71
ATP6AP1-204	ENST00000439372	NUTM2G	Q5VZR2	741 aa		32	■■■□□ 2.71
ATP6AP1-204	ENST00000439372	CABLES1	Q8TDN4	633 aa		32	■■■□□ 2.71
ATP6AP1-204	ENST00000439372	KIF7	Q2M1P5	1343 aa		32	■■■□□ 2.71
ATP6AP1-204	ENST00000439372	MARF1	Q9Y4F3	1742 aa	Known RBP	31.98	■■■□□ 2.71
ATP6AP1-204	ENST00000439372	PHRF1	Q9P1Y6	1649 aa	Known RBP	31.97	■■■□□ 2.71
ATP6AP1-204	ENST00000439372	ABTB2	Q8N961	1025 aa		31.97	■■■□□ 2.71
ATP6AP1-204	ENST00000439372	EDC4	Q6P2E9	1401 aa	Known RBP	31.97	■■■□□ 2.71
ATP6AP1-204	ENST00000439372	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	31.94	■■■□□ 2.7
ATP6AP1-204	ENST00000439372	TTC21A	Q8NDW8	1320 aa		31.94	■■■□□ 2.7
ATP6AP1-204	ENST00000439372	ADAMTS2	O95450	1211 aa		31.93	■■■□□ 2.7
ATP6AP1-204	ENST00000439372	MEX3C	Q5U5Q3	659 aa	Known RBP	31.92	■■■□□ 2.7
ATP6AP1-204	ENST00000439372	CCDC7	Q96M83	1385 aa		31.91	■■■□□ 2.7
ATP6AP1-204	ENST00000439372	NME9	Q86XW9	330 aa		31.89	■■■□□ 2.7
ATP6AP1-204	ENST00000439372	WASHC2A	Q641Q2	1341 aa		31.89	■■■□□ 2.7
ATP6AP1-204	ENST00000439372	USP54	Q70EL1	1684 aa		31.89	■■■□□ 2.7
ATP6AP1-204	ENST00000439372	HAP1	P54257	671 aa	Predicted RBP	31.88	■■■□□ 2.69
ATP6AP1-204	ENST00000439372	NLRP6	P59044	892 aa		31.88	■■■□□ 2.69
ATP6AP1-204	ENST00000439372	NLRP13	Q86W25	1043 aa		31.88	■■■□□ 2.69
ATP6AP1-204	ENST00000439372	CARD14	Q9BXL6	1004 aa		31.88	■■■□□ 2.69
ATP6AP1-204	ENST00000439372	ZRANB1	Q9UGI0	708 aa		31.88	■■■□□ 2.69
ATP6AP1-204	ENST00000439372	USP19	O94966	1318 aa		31.88	■■■□□ 2.69
ATP6AP1-204	ENST00000439372	KIF20B	Q96Q89	1820 aa		31.86	■■■□□ 2.69
ATP6AP1-204	ENST00000439372	SLIT3	O75094	1523 aa		31.85	■■■□□ 2.69
ATP6AP1-204	ENST00000439372	NSD3	Q9BZ95	1437 aa		31.85	■■■□□ 2.69
ATP6AP1-204	ENST00000439372	C8orf37	Q96NL8	207 aa		31.84	■■■□□ 2.69
ATP6AP1-204	ENST00000439372	USP31	Q70CQ4	1352 aa		31.82	■■■□□ 2.69
ATP6AP1-204	ENST00000439372	PANK3	Q9H999	370 aa		31.82	■■■□□ 2.68
ATP6AP1-204	ENST00000439372	ZNF316	A6NFI3	1004 aa	Predicted RBP	31.81	■■■□□ 2.68
ATP6AP1-204	ENST00000439372	PHF23	Q9BUL5	403 aa	Predicted RBP	31.8	■■■□□ 2.68
ATP6AP1-204	ENST00000439372	OVOS2	A0A0J9YW53	1432 aa		31.79	■■■□□ 2.68
ATP6AP1-204	ENST00000439372	OVOS2	Q6IE36	1432 aa		31.79	■■■□□ 2.68
ATP6AP1-204	ENST00000439372	PLCH1	Q4KWH8	1693 aa		31.79	■■■□□ 2.68
ATP6AP1-204	ENST00000439372	RGS17	Q9UGC6	210 aa	Predicted RBP	31.78	■■■□□ 2.68
ATP6AP1-204	ENST00000439372	AFF2	P51816	1311 aa		31.77	■■■□□ 2.68
ATP6AP1-204	ENST00000439372	GC	P02774	474 aa		31.77	■■■□□ 2.68
ATP6AP1-204	ENST00000439372	NGLY1	Q96IV0	654 aa		31.77	■■■□□ 2.68
ATP6AP1-204	ENST00000439372	ZC3H6	P61129	1189 aa	Known RBP	31.76	■■■□□ 2.67
ATP6AP1-204	ENST00000439372	COL14A1	Q05707	1796 aa	Known RBP	31.76	■■■□□ 2.67
ATP6AP1-204	ENST00000439372	FYB1	O15117	783 aa		31.75	■■■□□ 2.67
ATP6AP1-204	ENST00000439372	KIAA0232	Q92628	1395 aa		31.75	■■■□□ 2.67
ATP6AP1-204	ENST00000439372	NFAT5	O94916	1531 aa		31.75	■■■□□ 2.67
ATP6AP1-204	ENST00000439372	FAM83G	A6ND36	823 aa		31.74	■■■□□ 2.67
ATP6AP1-204	ENST00000439372	SOX12	O15370	315 aa		31.73	■■■□□ 2.67
ATP6AP1-204	ENST00000439372	GGNBP2	Q9H3C7	697 aa		31.73	■■■□□ 2.67
ATP6AP1-204	ENST00000439372	SLIT2	O94813	1529 aa		31.72	■■■□□ 2.67
ATP6AP1-204	ENST00000439372	PRDM11	Q9NQV5	511 aa		31.71	■■■□□ 2.67
ATP6AP1-204	ENST00000439372	NWD2	Q9ULI1	1742 aa		31.71	■■■□□ 2.67
ATP6AP1-204	ENST00000439372	ANKRD26	Q9UPS8	1709 aa		31.7	■■■□□ 2.67
ATP6AP1-204	ENST00000439372	CHRNA2	Q15822	529 aa		31.7	■■■□□ 2.67
ATP6AP1-204	ENST00000439372	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.7	■■■□□ 2.67
ATP6AP1-204	ENST00000439372	CPD	O75976	1380 aa		31.69	■■■□□ 2.66
ATP6AP1-204	ENST00000439372	COG3	Q96JB2	828 aa		31.69	■■■□□ 2.66
ATP6AP1-204	ENST00000439372	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.69	■■■□□ 2.66
ATP6AP1-204	ENST00000439372	KCNH5	Q8NCM2	988 aa		31.68	■■■□□ 2.66
ATP6AP1-204	ENST00000439372	NRAP	Q86VF7	1730 aa		31.68	■■■□□ 2.66
ATP6AP1-204	ENST00000439372	CGNL1	Q0VF96	1302 aa		31.68	■■■□□ 2.66
ATP6AP1-204	ENST00000439372	LTN1	O94822	1766 aa		31.68	■■■□□ 2.66
ATP6AP1-204	ENST00000439372	LMO7	Q8WWI1	1683 aa		31.67	■■■□□ 2.66
ATP6AP1-204	ENST00000439372	BCL9L	Q86UU0	1499 aa		31.67	■■■□□ 2.66
ATP6AP1-204	ENST00000439372	COL18A1	P39060	1754 aa		31.66	■■■□□ 2.66
ATP6AP1-204	ENST00000439372	USP21	Q9UK80	565 aa		31.66	■■■□□ 2.66
ATP6AP1-204	ENST00000439372	ZBTB7C	A1YPR0	619 aa		31.65	■■■□□ 2.66
ATP6AP1-204	ENST00000439372	POTEA	Q6S8J7	498 aa		31.65	■■■□□ 2.66
ATP6AP1-204	ENST00000439372	ZNF772	Q68DY9	489 aa	Predicted RBP	31.64	■■■□□ 2.66
ATP6AP1-204	ENST00000439372	KNSTRN	Q9Y448	316 aa		31.64	■■■□□ 2.66
ATP6AP1-204	ENST00000439372	RGPD5	Q99666	1765 aa		31.63	■■■□□ 2.65
ATP6AP1-204	ENST00000439372	ARHGEF25	Q86VW2	580 aa		31.62	■■■□□ 2.65
ATP6AP1-204	ENST00000439372	BTG4	Q9NY30	223 aa		31.62	■■■□□ 2.65
ATP6AP1-204	ENST00000439372	CAMTA1	Q9Y6Y1	1673 aa		31.61	■■■□□ 2.65
ATP6AP1-204	ENST00000439372	PER1	O15534	1290 aa	Predicted RBP	31.61	■■■□□ 2.65
ATP6AP1-204	ENST00000439372	FBLN1	P23142	703 aa		31.61	■■■□□ 2.65
ATP6AP1-204	ENST00000439372	DDX10	Q13206	875 aa	Known RBP	31.61	■■■□□ 2.65
ATP6AP1-204	ENST00000439372	UNC5CL	Q8IV45	518 aa		31.59	■■■□□ 2.65
ATP6AP1-204	ENST00000439372	ATRN	O75882	1429 aa		31.58	■■■□□ 2.65
ATP6AP1-204	ENST00000439372	AATK	Q6ZMQ8	1374 aa		31.57	■■■□□ 2.64
ATP6AP1-204	ENST00000439372	AMER1	Q5JTC6	1135 aa	Predicted RBP	31.57	■■■□□ 2.64
ATP6AP1-204	ENST00000439372	QTRT2	Q9H974	415 aa	Known RBP	31.57	■■■□□ 2.64
ATP6AP1-204	ENST00000439372	NSD2	O96028	1365 aa		31.56	■■■□□ 2.64
ATP6AP1-204	ENST00000439372	TRPC5	Q9UL62	973 aa	Predicted RBP	31.54	■■■□□ 2.64
ATP6AP1-204	ENST00000439372	AXIN2	Q9Y2T1	843 aa		31.53	■■■□□ 2.64

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms