RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 SPATA31E1Q6ZUB1 1445 aa10.01□□□□□ -0.81
ERCC8-203ENST00000439176 ATN1P54259 1190 aaPredicted RBP10.01□□□□□ -0.81
ERCC8-203ENST00000439176 RBM6P78332 1123 aaKnown RBP10.01□□□□□ -0.81
ERCC8-203ENST00000439176 ABCC11Q96J66 1382 aa10.01□□□□□ -0.81
ERCC8-203ENST00000439176 CDK12Q9NYV4 1490 aaPredicted RBP10□□□□□ -0.81
ERCC8-203ENST00000439176 SETD1AO15047 1707 aaKnown RBP10□□□□□ -0.81
ERCC8-203ENST00000439176 TMEM132EQ6IEE7 984 aa10□□□□□ -0.81
ERCC8-203ENST00000439176 FOXO3O43524 673 aa9.99□□□□□ -0.81
ERCC8-203ENST00000439176 WAPLQ7Z5K2 1190 aa9.99□□□□□ -0.81
ERCC8-203ENST00000439176 SIRT1Q96EB6 747 aa9.99□□□□□ -0.81
ERCC8-203ENST00000439176 USP21Q9UK80 565 aa9.99□□□□□ -0.81
ERCC8-203ENST00000439176 DHX57Q6P158 1386 aaKnown RBP9.99□□□□□ -0.81
ERCC8-203ENST00000439176 TECPR2O15040 1411 aa9.99□□□□□ -0.81
ERCC8-203ENST00000439176 PIK3C2GO75747 1445 aa9.99□□□□□ -0.81
ERCC8-203ENST00000439176 UPF1Q92900 1129 aaKnown RBP eCLIP9.98□□□□□ -0.81
ERCC8-203ENST00000439176 C14orf93Q9H972 538 aaKnown RBP9.98□□□□□ -0.81
ERCC8-203ENST00000439176 TRPC5Q9UL62 973 aaPredicted RBP9.98□□□□□ -0.81
ERCC8-203ENST00000439176 CDC42BPGQ6DT37 1551 aa9.97□□□□□ -0.81
ERCC8-203ENST00000439176 LAMC1P11047 1609 aa9.97□□□□□ -0.81
ERCC8-203ENST00000439176 NUTM2FA1L443 756 aa9.97□□□□□ -0.81
ERCC8-203ENST00000439176 YTHDC2Q9H6S0 1430 aaKnown RBP9.97□□□□□ -0.81
ERCC8-203ENST00000439176 PSME1Q06323 249 aa9.96□□□□□ -0.82
ERCC8-203ENST00000439176 RASEFQ8IZ41 740 aa9.96□□□□□ -0.82
ERCC8-203ENST00000439176 FNBP4Q8N3X1 1017 aaPredicted RBP9.96□□□□□ -0.82
ERCC8-203ENST00000439176 POGKQ9P215 609 aa9.96□□□□□ -0.82
ERCC8-203ENST00000439176 POTEFA5A3E0 1075 aa9.95□□□□□ -0.82
ERCC8-203ENST00000439176 HAP1P54257 671 aaPredicted RBP9.95□□□□□ -0.82
ERCC8-203ENST00000439176 XPCQ01831 940 aaPredicted RBP9.95□□□□□ -0.82
ERCC8-203ENST00000439176 CFAP70Q5T0N1 1121 aa9.95□□□□□ -0.82
ERCC8-203ENST00000439176 STAC3Q96MF2 364 aa9.95□□□□□ -0.82
ERCC8-203ENST00000439176 RAB3GAP2Q9H2M9 1393 aa9.95□□□□□ -0.82
ERCC8-203ENST00000439176 IFT172Q9UG01 1749 aa9.94□□□□□ -0.82
ERCC8-203ENST00000439176 PLEKHH1Q9ULM0 1364 aa9.94□□□□□ -0.82
ERCC8-203ENST00000439176 MYOM2P54296 1465 aa9.93□□□□□ -0.82
ERCC8-203ENST00000439176 KRT28Q7Z3Y7 464 aa9.93□□□□□ -0.82
ERCC8-203ENST00000439176 PRAM1Q96QH2 718 aa9.93□□□□□ -0.82
ERCC8-203ENST00000439176 PHF8Q9UPP1 1060 aa9.93□□□□□ -0.82
ERCC8-203ENST00000439176 KNDC1Q76NI1 1749 aa9.93□□□□□ -0.82
ERCC8-203ENST00000439176 PXDNQ92626 1479 aa9.92□□□□□ -0.82
ERCC8-203ENST00000439176 RGS12O14924 1447 aa9.92□□□□□ -0.82
ERCC8-203ENST00000439176 ATAD2Q6PL18 1390 aa9.92□□□□□ -0.82
ERCC8-203ENST00000439176 SPATA31A3Q5VYP0 1347 aa9.92□□□□□ -0.82
ERCC8-203ENST00000439176 HRCP23327 699 aa9.92□□□□□ -0.82
ERCC8-203ENST00000439176 SAFB2Q14151 953 aaKnown RBP eCLIP9.92□□□□□ -0.824e-6■■■■□ 19.5
ERCC8-203ENST00000439176 CCDC61Q9Y6R9 512 aa9.92□□□□□ -0.82
ERCC8-203ENST00000439176 COL22A1Q8NFW1 1626 aaPredicted RBP9.92□□□□□ -0.82
ERCC8-203ENST00000439176 NRXN1Q9ULB1 1477 aa9.91□□□□□ -0.82
ERCC8-203ENST00000439176 LMOD2Q6P5Q4 547 aa9.91□□□□□ -0.82
ERCC8-203ENST00000439176 KLHL34Q8N239 644 aa9.91□□□□□ -0.82
ERCC8-203ENST00000439176 DCAF11Q8TEB1 546 aa9.91□□□□□ -0.82
ERCC8-203ENST00000439176 KDM2AQ9Y2K7 1162 aa9.91□□□□□ -0.82
ERCC8-203ENST00000439176 EIF3AQ14152 1382 aaKnown RBP9.9□□□□□ -0.82
ERCC8-203ENST00000439176 KIF1AQ12756 1690 aa9.9□□□□□ -0.82
ERCC8-203ENST00000439176 UNC5CLQ8IV45 518 aa9.9□□□□□ -0.82
ERCC8-203ENST00000439176 SPOCK2Q92563 424 aa9.9□□□□□ -0.82
ERCC8-203ENST00000439176 GJD4Q96KN9 370 aaPredicted RBP9.9□□□□□ -0.82
ERCC8-203ENST00000439176 TRAK1Q9UPV9 953 aa9.9□□□□□ -0.82
ERCC8-203ENST00000439176 ATRNO75882 1429 aa9.9□□□□□ -0.83
ERCC8-203ENST00000439176 ARHGEF10O15013 1369 aa9.89□□□□□ -0.83
ERCC8-203ENST00000439176 MMRN1Q13201 1228 aa9.89□□□□□ -0.83
ERCC8-203ENST00000439176 CCDC125Q86Z20 511 aa9.89□□□□□ -0.83
ERCC8-203ENST00000439176 TSPYL2Q9H2G4 693 aaPredicted RBP9.89□□□□□ -0.83
ERCC8-203ENST00000439176 BMP2KQ9NSY1 1161 aaPredicted RBP9.89□□□□□ -0.83
ERCC8-203ENST00000439176 FMN2Q9NZ56 1722 aa9.89□□□□□ -0.83
ERCC8-203ENST00000439176 SBNO1A3KN83 1393 aa9.88□□□□□ -0.83
ERCC8-203ENST00000439176 GPRASP1Q5JY77 1395 aa9.88□□□□□ -0.83
ERCC8-203ENST00000439176 DLC1Q96QB1 1528 aa9.88□□□□□ -0.83
ERCC8-203ENST00000439176 BCL9LQ86UU0 1499 aa9.88□□□□□ -0.83
ERCC8-203ENST00000439176 TNS3Q68CZ2 1445 aa9.88□□□□□ -0.83
ERCC8-203ENST00000439176 ANKARQ7Z5J8 1434 aa9.88□□□□□ -0.83
ERCC8-203ENST00000439176 PMFBP1Q8TBY8 1022 aa9.87□□□□□ -0.83
ERCC8-203ENST00000439176 HIRIP3Q9BW71 556 aaPredicted RBP9.87□□□□□ -0.83
ERCC8-203ENST00000439176 CCDC9Q9Y3X0 531 aaKnown RBP9.87□□□□□ -0.83
ERCC8-203ENST00000439176 MINK1Q8N4C8 1332 aaPredicted RBP9.86□□□□□ -0.83
ERCC8-203ENST00000439176 WASLO00401 505 aaPredicted RBP9.86□□□□□ -0.83
ERCC8-203ENST00000439176 SEC24BO95487 1268 aa9.86□□□□□ -0.83
ERCC8-203ENST00000439176 NGDNQ8NEJ9 315 aaKnown RBP9.86□□□□□ -0.83
ERCC8-203ENST00000439176 MARF1Q9Y4F3 1742 aaKnown RBP9.85□□□□□ -0.83
ERCC8-203ENST00000439176 ST18O60284 1047 aa9.85□□□□□ -0.83
ERCC8-203ENST00000439176 CABLES1Q8TDN4 633 aa9.85□□□□□ -0.83
ERCC8-203ENST00000439176 FAM212AQ96EL1 285 aa9.85□□□□□ -0.83
ERCC8-203ENST00000439176 SLIT2O94813 1529 aa9.84□□□□□ -0.83
ERCC8-203ENST00000439176 SF3B2Q13435 895 aaKnown RBP9.84□□□□□ -0.83
ERCC8-203ENST00000439176 VPS72Q15906 364 aa9.84□□□□□ -0.83
ERCC8-203ENST00000439176 SPNS2Q8IVW8 549 aa9.84□□□□□ -0.83
ERCC8-203ENST00000439176 TRPC6Q9Y210 931 aa9.84□□□□□ -0.83
ERCC8-203ENST00000439176 COLQQ9Y215 455 aaPredicted RBP9.84□□□□□ -0.83
ERCC8-203ENST00000439176 ADGRB1O14514 1584 aa9.84□□□□□ -0.83
ERCC8-203ENST00000439176 USP32Q8NFA0 1604 aa9.83□□□□□ -0.84
ERCC8-203ENST00000439176 KIF12Q96FN5 646 aa9.83□□□□□ -0.84
ERCC8-203ENST00000439176 RALGAPBQ86X10 1494 aa9.83□□□□□ -0.84
ERCC8-203ENST00000439176 ADGRB2O60241 1585 aa9.83□□□□□ -0.84
ERCC8-203ENST00000439176 RGPD8O14715 1765 aaPredicted RBP9.83□□□□□ -0.84
ERCC8-203ENST00000439176 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.82□□□□□ -0.84
ERCC8-203ENST00000439176 A0A0G2JS52 829 aa9.82□□□□□ -0.84
ERCC8-203ENST00000439176 MYT1Q01538 1121 aa9.82□□□□□ -0.84
ERCC8-203ENST00000439176 GSE1Q14687 1217 aa9.82□□□□□ -0.84
ERCC8-203ENST00000439176 SEPT12Q8IYM1 358 aa9.82□□□□□ -0.84
ERCC8-203ENST00000439176 TULP4Q9NRJ4 1543 aa9.82□□□□□ -0.84
ERCC8-203ENST00000439176 FAM83GA6ND36 823 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms