RNA–Protein interactions for RNA: ENST00000438826.7

TVP23C-204, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-204ENST00000438826 B4GALNT3Q6L9W6 998 aa22.83■■□□□ 1.24
TVP23C-204ENST00000438826 WWC1Q8IX03 1113 aa22.83■■□□□ 1.24
TVP23C-204ENST00000438826 TCP11L2Q8N4U5 519 aa22.83■■□□□ 1.24
TVP23C-204ENST00000438826 PIK3R4Q99570 1358 aa22.83■■□□□ 1.24
TVP23C-204ENST00000438826 MON2Q7Z3U7 1717 aa22.82■■□□□ 1.24
TVP23C-204ENST00000438826 ANKLE2Q86XL3 938 aa22.81■■□□□ 1.24
TVP23C-204ENST00000438826 AKAP12Q02952 1782 aa22.81■■□□□ 1.24
TVP23C-204ENST00000438826 PLEKHG3A1L390 1219 aa22.81■■□□□ 1.24
TVP23C-204ENST00000438826 NCBP3Q53F19 620 aaKnown RBP22.81■■□□□ 1.24
TVP23C-204ENST00000438826 NME9Q86XW9 330 aa22.81■■□□□ 1.24
TVP23C-204ENST00000438826 ZNF142P52746 1687 aaPredicted RBP22.81■■□□□ 1.24
TVP23C-204ENST00000438826 SPINK5Q9NQ38 1064 aaPredicted RBP22.8■■□□□ 1.24
TVP23C-204ENST00000438826 ITSN1Q15811 1721 aa22.8■■□□□ 1.24
TVP23C-204ENST00000438826 U2SURPO15042 1029 aaKnown RBP22.79■■□□□ 1.24
TVP23C-204ENST00000438826 DIAPH1O60610 1272 aaKnown RBP22.79■■□□□ 1.24
TVP23C-204ENST00000438826 POLKQ9UBT6 870 aa22.79■■□□□ 1.24
TVP23C-204ENST00000438826 TOPAZ1Q8N9V7 1692 aa22.79■■□□□ 1.24
TVP23C-204ENST00000438826 XRN1Q8IZH2 1706 aaKnown RBP22.79■■□□□ 1.24
TVP23C-204ENST00000438826 CCDC27Q2M243 656 aa22.78■■□□□ 1.24
TVP23C-204ENST00000438826 COG3Q96JB2 828 aa22.78■■□□□ 1.24
TVP23C-204ENST00000438826 PHF23Q9BUL5 403 aaPredicted RBP22.78■■□□□ 1.24
TVP23C-204ENST00000438826 NEUROD2Q15784 382 aa22.77■■□□□ 1.24
TVP23C-204ENST00000438826 TSHZ2Q9NRE2 1034 aa22.77■■□□□ 1.24
TVP23C-204ENST00000438826 RRP7AQ9Y3A4 280 aaKnown RBP22.77■■□□□ 1.24
TVP23C-204ENST00000438826 NKTRP30414 1462 aaKnown RBP22.77■■□□□ 1.24
TVP23C-204ENST00000438826 ACEP12821 1306 aa22.77■■□□□ 1.24
TVP23C-204ENST00000438826 SETD1BQ9UPS6 1966 aaKnown RBP22.77■■□□□ 1.24
TVP23C-204ENST00000438826 NUTM2FA1L443 756 aa22.77■■□□□ 1.24
TVP23C-204ENST00000438826 AATKQ6ZMQ8 1374 aa22.76■■□□□ 1.23
TVP23C-204ENST00000438826 KCNA6P17658 529 aa22.76■■□□□ 1.23
TVP23C-204ENST00000438826 DMRT2Q9Y5R5 561 aa22.76■■□□□ 1.23
TVP23C-204ENST00000438826 PLEKHF1Q96S99 279 aa22.75■■□□□ 1.23
TVP23C-204ENST00000438826 WDR63Q8IWG1 891 aa22.75■■□□□ 1.23
TVP23C-204ENST00000438826 CCDC136Q96JN2 1154 aa22.75■■□□□ 1.23
TVP23C-204ENST00000438826 ZRANB1Q9UGI0 708 aa22.75■■□□□ 1.23
TVP23C-204ENST00000438826 PPM1GO15355 546 aaPredicted RBP22.74■■□□□ 1.23
TVP23C-204ENST00000438826 FBLN1P23142 703 aa22.74■■□□□ 1.23
TVP23C-204ENST00000438826 PNNQ9H307 717 aaKnown RBP22.74■■□□□ 1.23
TVP23C-204ENST00000438826 PLIN1O60240 522 aa22.73■■□□□ 1.23
TVP23C-204ENST00000438826 TTC21BQ7Z4L5 1316 aa22.73■■□□□ 1.23
TVP23C-204ENST00000438826 EXOC6Q8TAG9 804 aa22.72■■□□□ 1.23
TVP23C-204ENST00000438826 USP6P35125 1406 aa22.72■■□□□ 1.23
TVP23C-204ENST00000438826 MAP2P11137 1827 aaKnown RBP22.71■■□□□ 1.23
TVP23C-204ENST00000438826 MAPK8IP3Q9UPT6 1336 aa22.71■■□□□ 1.23
TVP23C-204ENST00000438826 NRKQ7Z2Y5 1582 aa22.7■■□□□ 1.22
TVP23C-204ENST00000438826 EMILIN1Q9Y6C2 1016 aa22.7■■□□□ 1.22
TVP23C-204ENST00000438826 CDK12Q9NYV4 1490 aaPredicted RBP22.69■■□□□ 1.22
TVP23C-204ENST00000438826 FCHSD2O94868 740 aa22.68■■□□□ 1.22
TVP23C-204ENST00000438826 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.68■■□□□ 1.22
TVP23C-204ENST00000438826 ANKARQ7Z5J8 1434 aa22.68■■□□□ 1.22
TVP23C-204ENST00000438826 TMPOP42166 694 aaKnown RBP22.67■■□□□ 1.22
TVP23C-204ENST00000438826 SSH2Q76I76 1423 aa22.66■■□□□ 1.22
TVP23C-204ENST00000438826 PMFBP1Q8TBY8 1022 aa22.66■■□□□ 1.22
TVP23C-204ENST00000438826 CHD2O14647 1828 aaKnown RBP22.65■■□□□ 1.22
TVP23C-204ENST00000438826 NGDNQ8NEJ9 315 aaKnown RBP22.65■■□□□ 1.22
TVP23C-204ENST00000438826 TTC21AQ8NDW8 1320 aa22.65■■□□□ 1.22
TVP23C-204ENST00000438826 OVOS2A0A0J9YW53 1432 aa22.65■■□□□ 1.22
TVP23C-204ENST00000438826 OVOS2Q6IE36 1432 aa22.65■■□□□ 1.22
TVP23C-204ENST00000438826 IL13P35225 146 aa22.64■■□□□ 1.22
TVP23C-204ENST00000438826 RRS1Q15050 365 aaKnown RBP22.64■■□□□ 1.22
TVP23C-204ENST00000438826 MYH16Q9H6N6 1097 aa22.64■■□□□ 1.21
TVP23C-204ENST00000438826 CRBNQ96SW2 442 aa22.63■■□□□ 1.21
TVP23C-204ENST00000438826 RSPH6AQ9H0K4 717 aa22.63■■□□□ 1.21
TVP23C-204ENST00000438826 NPHP4O75161 1426 aaPredicted RBP22.63■■□□□ 1.21
TVP23C-204ENST00000438826 NEFMP07197 916 aa22.62■■□□□ 1.21
TVP23C-204ENST00000438826 C20orf194Q5TEA3 1177 aa22.62■■□□□ 1.21
TVP23C-204ENST00000438826 TRIM35Q9UPQ4 493 aa22.61■■□□□ 1.21
TVP23C-204ENST00000438826 RGPD8O14715 1765 aaPredicted RBP22.61■■□□□ 1.21
TVP23C-204ENST00000438826 LRRC7Q96NW7 1537 aa22.6■■□□□ 1.21
TVP23C-204ENST00000438826 PRKAR2BP31323 418 aa22.6■■□□□ 1.21
TVP23C-204ENST00000438826 USP31Q70CQ4 1352 aa22.6■■□□□ 1.21
TVP23C-204ENST00000438826 FMN2Q9NZ56 1722 aa22.6■■□□□ 1.21
TVP23C-204ENST00000438826 RIPK4P57078 832 aa22.6■■□□□ 1.21
TVP23C-204ENST00000438826 BCAR3O75815 825 aa22.59■■□□□ 1.21
TVP23C-204ENST00000438826 IL16Q14005 1332 aa22.57■■□□□ 1.2
TVP23C-204ENST00000438826 NALCNQ8IZF0 1738 aa22.57■■□□□ 1.2
TVP23C-204ENST00000438826 HMOX1P09601 288 aa22.57■■□□□ 1.2
TVP23C-204ENST00000438826 RARSP54136 660 aaKnown RBP22.54■■□□□ 1.2
TVP23C-204ENST00000438826 ADGRL3Q9HAR2 1447 aa22.53■■□□□ 1.2
TVP23C-204ENST00000438826 NFE2L2Q16236 605 aa22.53■■□□□ 1.2
TVP23C-204ENST00000438826 PHACTR3Q96KR7 559 aa22.53■■□□□ 1.2
TVP23C-204ENST00000438826 FANCIQ9NVI1 1328 aa22.52■■□□□ 1.2
TVP23C-204ENST00000438826 CT47B1P0C2W7 299 aaPredicted RBP22.51■■□□□ 1.19
TVP23C-204ENST00000438826 RBM33Q96EV2 1170 aaKnown RBP22.51■■□□□ 1.19
TVP23C-204ENST00000438826 EIF4A2Q14240 407 aaKnown RBP22.51■■□□□ 1.19
TVP23C-204ENST00000438826 PDE3AQ14432 1141 aa22.5■■□□□ 1.19
TVP23C-204ENST00000438826 PHF8Q9UPP1 1060 aa22.5■■□□□ 1.19
TVP23C-204ENST00000438826 TSR2Q969E8 191 aaKnown RBP22.49■■□□□ 1.19
TVP23C-204ENST00000438826 RBM19Q9Y4C8 960 aaKnown RBP22.49■■□□□ 1.19
TVP23C-204ENST00000438826 PIK3C2AO00443 1686 aa22.49■■□□□ 1.19
TVP23C-204ENST00000438826 SOX12O15370 315 aa22.49■■□□□ 1.19
TVP23C-204ENST00000438826 CANXP27824 592 aaKnown RBP22.49■■□□□ 1.19
TVP23C-204ENST00000438826 NLRP6P59044 892 aa22.48■■□□□ 1.19
TVP23C-204ENST00000438826 HSP90AB2PQ58FF8 381 aa22.48■■□□□ 1.19
TVP23C-204ENST00000438826 MAP3K19Q56UN5 1328 aa22.48■■□□□ 1.19
TVP23C-204ENST00000438826 PEAK1Q9H792 1746 aa22.47■■□□□ 1.19
TVP23C-204ENST00000438826 CALD1Q05682 793 aaKnown RBP22.47■■□□□ 1.19
TVP23C-204ENST00000438826 C14orf37Q86TY3 774 aa22.47■■□□□ 1.19
TVP23C-204ENST00000438826 NWD1Q149M9 1564 aa22.46■■□□□ 1.19
TVP23C-204ENST00000438826 SBNO1A3KN83 1393 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms