RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 PSME1Q06323 249 aa13.44□□□□□ -0.26
SEMA4D-211ENST00000438547 RIC3Q7Z5B4 369 aa13.44□□□□□ -0.26
SEMA4D-211ENST00000438547 SLC4A2P04920 1241 aa13.44□□□□□ -0.26
SEMA4D-211ENST00000438547 AIMP1Q12904 312 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-211ENST00000438547 PRAM1Q96QH2 718 aa13.44□□□□□ -0.26
SEMA4D-211ENST00000438547 FSD1Q9BTV5 496 aa13.44□□□□□ -0.26
SEMA4D-211ENST00000438547 GAS2L2Q8NHY3 880 aa13.44□□□□□ -0.26
SEMA4D-211ENST00000438547 NEUROD6Q96NK8 337 aa13.44□□□□□ -0.26
SEMA4D-211ENST00000438547 NAT10Q9H0A0 1025 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-211ENST00000438547 ARGLU1Q9NWB6 273 aaPredicted RBP13.44□□□□□ -0.26
SEMA4D-211ENST00000438547 NLRP6P59044 892 aa13.43□□□□□ -0.26
SEMA4D-211ENST00000438547 RBM10P98175 930 aaKnown RBP13.43□□□□□ -0.26
SEMA4D-211ENST00000438547 NFXL1Q6ZNB6 911 aa13.43□□□□□ -0.26
SEMA4D-211ENST00000438547 RALYLQ86SE5 291 aaKnown RBP13.43□□□□□ -0.26
SEMA4D-211ENST00000438547 SUPT6HQ7KZ85 1726 aaKnown RBP13.43□□□□□ -0.26
SEMA4D-211ENST00000438547 NCOA1Q15788 1441 aa13.42□□□□□ -0.26
SEMA4D-211ENST00000438547 BCL11BQ9C0K0 894 aaPredicted RBP13.42□□□□□ -0.26
SEMA4D-211ENST00000438547 SAFBQ15424 915 aaKnown RBP eCLIP13.41□□□□□ -0.26
SEMA4D-211ENST00000438547 ZNF428Q96B54 188 aa13.41□□□□□ -0.26
SEMA4D-211ENST00000438547 PODXL2Q9NZ53 605 aa13.41□□□□□ -0.26
SEMA4D-211ENST00000438547 WDR33Q9C0J8 1336 aaKnown RBP13.41□□□□□ -0.26
SEMA4D-211ENST00000438547 CEP89Q96ST8 783 aa13.41□□□□□ -0.26
SEMA4D-211ENST00000438547 TMX4Q9H1E5 349 aaPredicted RBP13.41□□□□□ -0.26
SEMA4D-211ENST00000438547 CABP1Q9NZU7 370 aa13.41□□□□□ -0.26
SEMA4D-211ENST00000438547 CCT4P50991 539 aaKnown RBP13.41□□□□□ -0.26
SEMA4D-211ENST00000438547 PDE4CQ08493 712 aa13.41□□□□□ -0.26
SEMA4D-211ENST00000438547 TMEM57Q8N5G2 664 aa13.41□□□□□ -0.26
SEMA4D-211ENST00000438547 PCMTD1Q96MG8 357 aaPredicted RBP13.41□□□□□ -0.26
SEMA4D-211ENST00000438547 SULT6B1Q6IMI4 303 aa13.41□□□□□ -0.26
SEMA4D-211ENST00000438547 KINO60870 393 aaKnown RBP13.4□□□□□ -0.26
SEMA4D-211ENST00000438547 LRRCC1Q9C099 1032 aa13.4□□□□□ -0.26
SEMA4D-211ENST00000438547 WASHC4Q2M389 1173 aa13.4□□□□□ -0.26
SEMA4D-211ENST00000438547 NUTM2GQ5VZR2 741 aa13.4□□□□□ -0.26
SEMA4D-211ENST00000438547 HECW1Q76N89 1606 aa13.4□□□□□ -0.26
SEMA4D-211ENST00000438547 POLA1P09884 1462 aaPredicted RBP13.4□□□□□ -0.26
SEMA4D-211ENST00000438547 RARSP54136 660 aaKnown RBP13.4□□□□□ -0.26
SEMA4D-211ENST00000438547 RAPGEF4Q8WZA2 1011 aa13.4□□□□□ -0.26
SEMA4D-211ENST00000438547 TMPOP42166 694 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-211ENST00000438547 CCDC47Q96A33 483 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-211ENST00000438547 HIP1O00291 1037 aa13.39□□□□□ -0.27
SEMA4D-211ENST00000438547 CYB5RLQ6IPT4 315 aa13.39□□□□□ -0.27
SEMA4D-211ENST00000438547 MPNDQ8N594 471 aa13.39□□□□□ -0.27
SEMA4D-211ENST00000438547 CDK19Q9BWU1 502 aa13.39□□□□□ -0.27
SEMA4D-211ENST00000438547 SPC24Q8NBT2 197 aa13.38□□□□□ -0.27
SEMA4D-211ENST00000438547 TOPBP1Q92547 1522 aa13.38□□□□□ -0.27
SEMA4D-211ENST00000438547 ERICH2A1L162 156 aa13.38□□□□□ -0.27
SEMA4D-211ENST00000438547 VPS53Q5VIR6 699 aa13.38□□□□□ -0.27
SEMA4D-211ENST00000438547 OLFM4Q6UX06 510 aa13.38□□□□□ -0.27
SEMA4D-211ENST00000438547 EPRSP07814 1512 aaKnown RBP13.38□□□□□ -0.27
SEMA4D-211ENST00000438547 MAP3K1Q13233 1512 aa13.38□□□□□ -0.27
SEMA4D-211ENST00000438547 FCHSD2O94868 740 aa13.38□□□□□ -0.27
SEMA4D-211ENST00000438547 CCDC192P0DO97 292 aa13.38□□□□□ -0.27
SEMA4D-211ENST00000438547 SETQ01105 290 aaPredicted RBP13.38□□□□□ -0.27
SEMA4D-211ENST00000438547 RPAP2Q8IXW5 612 aaPredicted RBP13.38□□□□□ -0.27
SEMA4D-211ENST00000438547 CYP46A1Q9Y6A2 500 aa13.38□□□□□ -0.27
SEMA4D-211ENST00000438547 PLEKHH2Q8IVE3 1493 aa13.38□□□□□ -0.27
SEMA4D-211ENST00000438547 HDGFL1Q5TGJ6 251 aa13.37□□□□□ -0.27
SEMA4D-211ENST00000438547 EVA1CP58658 441 aa13.37□□□□□ -0.27
SEMA4D-211ENST00000438547 ERC1Q8IUD2 1116 aa13.37□□□□□ -0.27
SEMA4D-211ENST00000438547 G3V3G9 751 aa13.37□□□□□ -0.27
SEMA4D-211ENST00000438547 DCAF8Q5TAQ9 597 aa13.37□□□□□ -0.27
SEMA4D-211ENST00000438547 DUSP27Q5VZP5 1158 aa13.37□□□□□ -0.27
SEMA4D-211ENST00000438547 AEBP1Q8IUX7 1158 aa13.36□□□□□ -0.27
SEMA4D-211ENST00000438547 FMNL2Q96PY5 1086 aa13.36□□□□□ -0.27
SEMA4D-211ENST00000438547 SSH1Q8WYL5 1049 aa13.36□□□□□ -0.27
SEMA4D-211ENST00000438547 TBC1D2Q9BYX2 928 aa13.36□□□□□ -0.27
SEMA4D-211ENST00000438547 ZSCAN30Q86W11 494 aa13.36□□□□□ -0.27
SEMA4D-211ENST00000438547 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
SEMA4D-211ENST00000438547 PDILTQ8N807 584 aa13.36□□□□□ -0.27
SEMA4D-211ENST00000438547 SRCIN1Q9C0H9 1055 aa13.36□□□□□ -0.27
SEMA4D-211ENST00000438547 CDK13Q14004 1512 aaKnown RBP13.36□□□□□ -0.27
SEMA4D-211ENST00000438547 PCF11O94913 1555 aaKnown RBP13.36□□□□□ -0.27
SEMA4D-211ENST00000438547 NSD3Q9BZ95 1437 aa13.36□□□□□ -0.27
SEMA4D-211ENST00000438547 NKTRP30414 1462 aaKnown RBP13.36□□□□□ -0.27
SEMA4D-211ENST00000438547 RRP9O43818 475 aaKnown RBP13.36□□□□□ -0.27
SEMA4D-211ENST00000438547 KRT85P78386 507 aa13.35□□□□□ -0.27
SEMA4D-211ENST00000438547 SMC2O95347 1197 aa13.35□□□□□ -0.27
SEMA4D-211ENST00000438547 HSP90B2PQ58FF3 399 aa13.35□□□□□ -0.27
SEMA4D-211ENST00000438547 DNAJC2Q99543 621 aaKnown RBP13.35□□□□□ -0.27
SEMA4D-211ENST00000438547 NESP48681 1621 aa13.35□□□□□ -0.27
SEMA4D-211ENST00000438547 CEBPZQ03701 1054 aaKnown RBP13.34□□□□□ -0.27
SEMA4D-211ENST00000438547 NLRP2Q9NX02 1062 aa13.34□□□□□ -0.27
SEMA4D-211ENST00000438547 LRPPRCP42704 1394 aaKnown RBP13.34□□□□□ -0.27
SEMA4D-211ENST00000438547 NFE2L2Q16236 605 aa13.34□□□□□ -0.27
SEMA4D-211ENST00000438547 ZNF396Q96N95 335 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-211ENST00000438547 ZNF692Q9BU19 519 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-211ENST00000438547 ACBD3Q9H3P7 528 aa13.34□□□□□ -0.27
SEMA4D-211ENST00000438547 LARP1BQ659C4 914 aaKnown RBP13.34□□□□□ -0.27
SEMA4D-211ENST00000438547 ABCC5O15440 1437 aa13.34□□□□□ -0.27
SEMA4D-211ENST00000438547 UQCRHLA0A096LP55 91 aa13.34□□□□□ -0.27
SEMA4D-211ENST00000438547 UQCRHP07919 91 aa13.34□□□□□ -0.27
SEMA4D-211ENST00000438547 TXNDC2Q86VQ3 553 aa13.34□□□□□ -0.27
SEMA4D-211ENST00000438547 AMOTL1Q8IY63 956 aa13.34□□□□□ -0.27
SEMA4D-211ENST00000438547 TNMDQ9H2S6 317 aa13.34□□□□□ -0.27
SEMA4D-211ENST00000438547 ANKRD1Q15327 319 aa13.33□□□□□ -0.27
SEMA4D-211ENST00000438547 SLC52A1Q9NWF4 448 aa13.33□□□□□ -0.28
SEMA4D-211ENST00000438547 STK38Q15208 465 aa13.33□□□□□ -0.28
SEMA4D-211ENST00000438547 VPS37DQ86XT2 251 aa13.33□□□□□ -0.28
SEMA4D-211ENST00000438547 ABTB2Q8N961 1025 aa13.33□□□□□ -0.28
SEMA4D-211ENST00000438547 NCBP3Q53F19 620 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms