RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 KTN1Q86UP2 1357 aaKnown RBP14.58□□□□□ -0.08
HLA-DMB-259ENST00000438510 FOXO3O43524 673 aa14.57□□□□□ -0.08
HLA-DMB-259ENST00000438510 PSME1Q06323 249 aa14.57□□□□□ -0.08
HLA-DMB-259ENST00000438510 ANKRD26Q9UPS8 1709 aa14.57□□□□□ -0.08
HLA-DMB-259ENST00000438510 EDC4Q6P2E9 1401 aaKnown RBP14.57□□□□□ -0.08
HLA-DMB-259ENST00000438510 PIK3C2AO00443 1686 aa14.55□□□□□ -0.08
HLA-DMB-259ENST00000438510 USP54Q70EL1 1684 aa14.55□□□□□ -0.08
HLA-DMB-259ENST00000438510 SHPRHQ149N8 1683 aa14.55□□□□□ -0.08
HLA-DMB-259ENST00000438510 KRT28Q7Z3Y7 464 aa14.54□□□□□ -0.08
HLA-DMB-259ENST00000438510 SOS2Q07890 1332 aaPredicted RBP14.54□□□□□ -0.08
HLA-DMB-259ENST00000438510 SBNO1A3KN83 1393 aa14.54□□□□□ -0.08
HLA-DMB-259ENST00000438510 TNS3Q68CZ2 1445 aa14.54□□□□□ -0.08
HLA-DMB-259ENST00000438510 SSH2Q76I76 1423 aa14.53□□□□□ -0.08
HLA-DMB-259ENST00000438510 NSD3Q9BZ95 1437 aa14.53□□□□□ -0.08
HLA-DMB-259ENST00000438510 PANK3Q9H999 370 aa14.53□□□□□ -0.08
HLA-DMB-259ENST00000438510 COL22A1Q8NFW1 1626 aaPredicted RBP14.52□□□□□ -0.08
HLA-DMB-259ENST00000438510 TTC21AQ8NDW8 1320 aa14.52□□□□□ -0.08
HLA-DMB-259ENST00000438510 DDX17Q92841 729 aaKnown RBP14.52□□□□□ -0.09
HLA-DMB-259ENST00000438510 ABCA3Q99758 1704 aa14.52□□□□□ -0.09
HLA-DMB-259ENST00000438510 MARF1Q9Y4F3 1742 aaKnown RBP14.52□□□□□ -0.09
HLA-DMB-259ENST00000438510 XPCQ01831 940 aaPredicted RBP14.51□□□□□ -0.09
HLA-DMB-259ENST00000438510 CRYBG1Q9Y4K1 1723 aa14.51□□□□□ -0.09
HLA-DMB-259ENST00000438510 PHRF1Q9P1Y6 1649 aaKnown RBP14.51□□□□□ -0.09
HLA-DMB-259ENST00000438510 MED1Q15648 1581 aaPredicted RBP14.51□□□□□ -0.09
HLA-DMB-259ENST00000438510 ARHGEF10O15013 1369 aa14.5□□□□□ -0.09
HLA-DMB-259ENST00000438510 TTC21BQ7Z4L5 1316 aa14.5□□□□□ -0.09
HLA-DMB-259ENST00000438510 SOCS7O14512 581 aa14.5□□□□□ -0.09
HLA-DMB-259ENST00000438510 PAK3O75914 559 aaPredicted RBP14.5□□□□□ -0.09
HLA-DMB-259ENST00000438510 LRRC59Q96AG4 307 aaKnown RBP14.5□□□□□ -0.09
HLA-DMB-259ENST00000438510 SPATA31A3Q5VYP0 1347 aa14.49□□□□□ -0.09
HLA-DMB-259ENST00000438510 KNSTRNQ9Y448 316 aa14.49□□□□□ -0.09
HLA-DMB-259ENST00000438510 NSD2O96028 1365 aa14.48□□□□□ -0.09
HLA-DMB-259ENST00000438510 CGNL1Q0VF96 1302 aa14.48□□□□□ -0.09
HLA-DMB-259ENST00000438510 DDX10Q13206 875 aaKnown RBP14.48□□□□□ -0.09
HLA-DMB-259ENST00000438510 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.47□□□□□ -0.09
HLA-DMB-259ENST00000438510 ABTB2Q8N961 1025 aa14.47□□□□□ -0.09
HLA-DMB-259ENST00000438510 CARD14Q9BXL6 1004 aa14.47□□□□□ -0.09
HLA-DMB-259ENST00000438510 HSPA1LP34931 641 aa14.46□□□□□ -0.09
HLA-DMB-259ENST00000438510 LMOD2Q6P5Q4 547 aa14.46□□□□□ -0.09
HLA-DMB-259ENST00000438510 JCADQ9P266 1359 aa14.46□□□□□ -0.1
HLA-DMB-259ENST00000438510 OVOS2A0A0J9YW53 1432 aa14.45□□□□□ -0.1
HLA-DMB-259ENST00000438510 OVOS2Q6IE36 1432 aa14.45□□□□□ -0.1
HLA-DMB-259ENST00000438510 SLIT3O75094 1523 aa14.45□□□□□ -0.1
HLA-DMB-259ENST00000438510 USP31Q70CQ4 1352 aa14.45□□□□□ -0.1
HLA-DMB-259ENST00000438510 PNPLA6Q8IY17 1366 aa14.45□□□□□ -0.1
HLA-DMB-259ENST00000438510 LTN1O94822 1766 aa14.45□□□□□ -0.1
HLA-DMB-259ENST00000438510 PER1O15534 1290 aaPredicted RBP14.44□□□□□ -0.1
HLA-DMB-259ENST00000438510 NLRP13Q86W25 1043 aa14.44□□□□□ -0.1
HLA-DMB-259ENST00000438510 NPC1L1Q9UHC9 1359 aa14.44□□□□□ -0.1
HLA-DMB-259ENST00000438510 NME9Q86XW9 330 aa14.43□□□□□ -0.1
HLA-DMB-259ENST00000438510 FYB1O15117 783 aa14.42□□□□□ -0.1
HLA-DMB-259ENST00000438510 NLRP6P59044 892 aa14.42□□□□□ -0.1
HLA-DMB-259ENST00000438510 COG3Q96JB2 828 aa14.42□□□□□ -0.1
HLA-DMB-259ENST00000438510 MAP2P11137 1827 aaKnown RBP14.42□□□□□ -0.1
HLA-DMB-259ENST00000438510 USP19O94966 1318 aa14.41□□□□□ -0.1
HLA-DMB-259ENST00000438510 AMER1Q5JTC6 1135 aaPredicted RBP14.41□□□□□ -0.1
HLA-DMB-259ENST00000438510 NUTM2GQ5VZR2 741 aa14.4□□□□□ -0.1
HLA-DMB-259ENST00000438510 GGNBP2Q9H3C7 697 aa14.4□□□□□ -0.1
HLA-DMB-259ENST00000438510 NFAT5O94916 1531 aa14.4□□□□□ -0.1
HLA-DMB-259ENST00000438510 SPATA31A6Q5VVP1 1343 aa14.4□□□□□ -0.1
HLA-DMB-259ENST00000438510 HAP1P54257 671 aaPredicted RBP14.39□□□□□ -0.11
HLA-DMB-259ENST00000438510 KCNH5Q8NCM2 988 aa14.39□□□□□ -0.11
HLA-DMB-259ENST00000438510 COL14A1Q05707 1796 aaKnown RBP14.37□□□□□ -0.11
HLA-DMB-259ENST00000438510 CC2D1BQ5T0F9 858 aaKnown RBP14.37□□□□□ -0.11
HLA-DMB-259ENST00000438510 MORC1Q86VD1 984 aa14.37□□□□□ -0.11
HLA-DMB-259ENST00000438510 ZRANB1Q9UGI0 708 aa14.37□□□□□ -0.11
HLA-DMB-259ENST00000438510 PLCH1Q4KWH8 1693 aa14.36□□□□□ -0.11
HLA-DMB-259ENST00000438510 ABCC6O95255 1503 aa14.36□□□□□ -0.11
HLA-DMB-259ENST00000438510 NWD2Q9ULI1 1742 aa14.35□□□□□ -0.11
HLA-DMB-259ENST00000438510 PLEKHG5O94827 1062 aa14.35□□□□□ -0.11
HLA-DMB-259ENST00000438510 GCP02774 474 aa14.35□□□□□ -0.11
HLA-DMB-259ENST00000438510 CABLES1Q8TDN4 633 aa14.35□□□□□ -0.11
HLA-DMB-259ENST00000438510 AATKQ6ZMQ8 1374 aa14.34□□□□□ -0.11
HLA-DMB-259ENST00000438510 PARD3Q8TEW0 1356 aa14.34□□□□□ -0.11
HLA-DMB-259ENST00000438510 RGPD5Q99666 1765 aa14.34□□□□□ -0.11
HLA-DMB-259ENST00000438510 CPDO75976 1380 aa14.34□□□□□ -0.11
HLA-DMB-259ENST00000438510 LRP6O75581 1613 aa14.33□□□□□ -0.11
HLA-DMB-259ENST00000438510 LMO7Q8WWI1 1683 aa14.33□□□□□ -0.11
HLA-DMB-259ENST00000438510 COL18A1P39060 1754 aa14.33□□□□□ -0.12
HLA-DMB-259ENST00000438510 SOX12O15370 315 aa14.33□□□□□ -0.12
HLA-DMB-259ENST00000438510 CNGB1Q14028 1251 aaPredicted RBP14.33□□□□□ -0.12
HLA-DMB-259ENST00000438510 RALBP1Q15311 655 aa14.33□□□□□ -0.12
HLA-DMB-259ENST00000438510 FAM208AQ9UK61 1670 aaKnown RBP14.33□□□□□ -0.12
HLA-DMB-259ENST00000438510 PEAK1Q9H792 1746 aa14.32□□□□□ -0.12
HLA-DMB-259ENST00000438510 NUTM2BA6NNL0 878 aaPredicted RBP14.32□□□□□ -0.12
HLA-DMB-259ENST00000438510 NUTM2EB1AL46 878 aaPredicted RBP14.32□□□□□ -0.12
HLA-DMB-259ENST00000438510 NUTM2AQ8IVF1 878 aaPredicted RBP14.32□□□□□ -0.12
HLA-DMB-259ENST00000438510 RTL1A6NKG5 1358 aa14.32□□□□□ -0.12
HLA-DMB-259ENST00000438510 KIF24Q5T7B8 1368 aa14.32□□□□□ -0.12
HLA-DMB-259ENST00000438510 SMG6Q86US8 1419 aaKnown RBP14.32□□□□□ -0.12
HLA-DMB-259ENST00000438510 ANP32CO43423 234 aa14.31□□□□□ -0.12
HLA-DMB-259ENST00000438510 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.31□□□□□ -0.12
HLA-DMB-259ENST00000438510 KIAA0232Q92628 1395 aa14.31□□□□□ -0.12
HLA-DMB-259ENST00000438510 NRAPQ86VF7 1730 aa14.3□□□□□ -0.12
HLA-DMB-259ENST00000438510 TNNT2P45379 298 aaPredicted RBP14.3□□□□□ -0.12
HLA-DMB-259ENST00000438510 DIEXFQ68CQ4 756 aaKnown RBP14.3□□□□□ -0.12
HLA-DMB-259ENST00000438510 PRDM11Q9NQV5 511 aa14.3□□□□□ -0.12
HLA-DMB-259ENST00000438510 CDK12Q9NYV4 1490 aaPredicted RBP14.3□□□□□ -0.12
HLA-DMB-259ENST00000438510 ADAMTS2O95450 1211 aa14.29□□□□□ -0.12
HLA-DMB-259ENST00000438510 ZC3H6P61129 1189 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms