RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 NWD1Q149M9 1564 aa26.04■■□□□ 1.76
CHRNA7-202ENST00000437966 CFAP53Q96M91 514 aa26.04■■□□□ 1.76
CHRNA7-202ENST00000437966 ADGRL3Q9HAR2 1447 aa26.04■■□□□ 1.76
CHRNA7-202ENST00000437966 USP6P35125 1406 aa26.03■■□□□ 1.76
CHRNA7-202ENST00000437966 ANKARQ7Z5J8 1434 aa26.03■■□□□ 1.76
CHRNA7-202ENST00000437966 COG3Q96JB2 828 aa26.02■■□□□ 1.76
CHRNA7-202ENST00000437966 INSRP06213 1382 aa26■■□□□ 1.75
CHRNA7-202ENST00000437966 PPM1GO15355 546 aaPredicted RBP26■■□□□ 1.75
CHRNA7-202ENST00000437966 POLKQ9UBT6 870 aa25.98■■□□□ 1.75
CHRNA7-202ENST00000437966 SHPRHQ149N8 1683 aa25.98■■□□□ 1.75
CHRNA7-202ENST00000437966 NRKQ7Z2Y5 1582 aa25.97■■□□□ 1.75
CHRNA7-202ENST00000437966 STRCP1A6NGW2 1772 aa25.97■■□□□ 1.75
CHRNA7-202ENST00000437966 ESCO1Q5FWF5 840 aa25.97■■□□□ 1.75
CHRNA7-202ENST00000437966 PHF8Q9UPP1 1060 aa25.97■■□□□ 1.75
CHRNA7-202ENST00000437966 SSH2Q76I76 1423 aa25.97■■□□□ 1.75
CHRNA7-202ENST00000437966 EMILIN1Q9Y6C2 1016 aa25.96■■□□□ 1.75
CHRNA7-202ENST00000437966 STRCQ7RTU9 1775 aa25.96■■□□□ 1.75
CHRNA7-202ENST00000437966 RRS1Q15050 365 aaKnown RBP25.94■■□□□ 1.74
CHRNA7-202ENST00000437966 TMEM94Q12767 1356 aa25.94■■□□□ 1.74
CHRNA7-202ENST00000437966 APAF1O14727 1248 aa25.93■■□□□ 1.74
CHRNA7-202ENST00000437966 ORAI2Q96SN7 254 aa25.93■■□□□ 1.74
CHRNA7-202ENST00000437966 U2SURPO15042 1029 aaKnown RBP25.92■■□□□ 1.74
CHRNA7-202ENST00000437966 SOX12O15370 315 aa25.92■■□□□ 1.74
CHRNA7-202ENST00000437966 U2AF1L5P0DN76 240 aaPredicted RBP25.92■■□□□ 1.74
CHRNA7-202ENST00000437966 U2AF1Q01081 240 aaKnown RBP eCLIP25.92■■□□□ 1.74
CHRNA7-202ENST00000437966 C19orf44Q9H6X5 657 aa25.92■■□□□ 1.74
CHRNA7-202ENST00000437966 SUPT16HQ9Y5B9 1047 aaKnown RBP25.92■■□□□ 1.74
CHRNA7-202ENST00000437966 NUTM2GQ5VZR2 741 aa25.91■■□□□ 1.74
CHRNA7-202ENST00000437966 COL3A1P02461 1466 aaPredicted RBP25.9■■□□□ 1.74
CHRNA7-202ENST00000437966 PAK3O75914 559 aaPredicted RBP25.9■■□□□ 1.74
CHRNA7-202ENST00000437966 CDCA7LQ96GN5 454 aa25.9■■□□□ 1.74
CHRNA7-202ENST00000437966 TTC21AQ8NDW8 1320 aa25.9■■□□□ 1.74
CHRNA7-202ENST00000437966 DIAPH1O60610 1272 aaKnown RBP25.89■■□□□ 1.73
CHRNA7-202ENST00000437966 NUDCQ9Y266 331 aa25.89■■□□□ 1.73
CHRNA7-202ENST00000437966 MAP2P11137 1827 aaKnown RBP25.88■■□□□ 1.73
CHRNA7-202ENST00000437966 SMG6Q86US8 1419 aaKnown RBP25.88■■□□□ 1.73
CHRNA7-202ENST00000437966 PNPLA6Q8IY17 1366 aa25.88■■□□□ 1.73
CHRNA7-202ENST00000437966 OVOS2A0A0J9YW53 1432 aa25.88■■□□□ 1.73
CHRNA7-202ENST00000437966 OVOS2Q6IE36 1432 aa25.88■■□□□ 1.73
CHRNA7-202ENST00000437966 AATKQ6ZMQ8 1374 aa25.87■■□□□ 1.73
CHRNA7-202ENST00000437966 PSME1Q06323 249 aa25.86■■□□□ 1.73
CHRNA7-202ENST00000437966 ZNF335Q9H4Z2 1342 aaPredicted RBP25.86■■□□□ 1.73
CHRNA7-202ENST00000437966 XPCQ01831 940 aaPredicted RBP25.85■■□□□ 1.73
CHRNA7-202ENST00000437966 RUNDC1Q96C34 613 aa25.85■■□□□ 1.73
CHRNA7-202ENST00000437966 ATF3P18847 181 aa25.84■■□□□ 1.73
CHRNA7-202ENST00000437966 NLRP6P59044 892 aa25.84■■□□□ 1.73
CHRNA7-202ENST00000437966 FOXO3O43524 673 aa25.84■■□□□ 1.73
CHRNA7-202ENST00000437966 RRP7AQ9Y3A4 280 aaKnown RBP25.84■■□□□ 1.73
CHRNA7-202ENST00000437966 ABTB2Q8N961 1025 aa25.83■■□□□ 1.73
CHRNA7-202ENST00000437966 NEUROD2Q15784 382 aa25.82■■□□□ 1.72
CHRNA7-202ENST00000437966 PIK3C2AO00443 1686 aa25.82■■□□□ 1.72
CHRNA7-202ENST00000437966 FKBP8Q14318 412 aa25.82■■□□□ 1.72
CHRNA7-202ENST00000437966 C1orf167Q5SNV9 1468 aa25.81■■□□□ 1.72
CHRNA7-202ENST00000437966 PDE3BQ13370 1112 aa25.81■■□□□ 1.72
CHRNA7-202ENST00000437966 USP31Q70CQ4 1352 aa25.8■■□□□ 1.72
CHRNA7-202ENST00000437966 TCP11L2Q8N4U5 519 aa25.8■■□□□ 1.72
CHRNA7-202ENST00000437966 ZNF521Q96K83 1311 aa25.78■■□□□ 1.72
CHRNA7-202ENST00000437966 IL13P35225 146 aa25.78■■□□□ 1.72
CHRNA7-202ENST00000437966 IRX6P78412 446 aaPredicted RBP25.77■■□□□ 1.72
CHRNA7-202ENST00000437966 PLEKHF1Q96S99 279 aa25.77■■□□□ 1.72
CHRNA7-202ENST00000437966 CDK12Q9NYV4 1490 aaPredicted RBP25.76■■□□□ 1.71
CHRNA7-202ENST00000437966 MST1RQ04912 1400 aa25.76■■□□□ 1.71
CHRNA7-202ENST00000437966 NCOA3Q9Y6Q9 1424 aa25.76■■□□□ 1.71
CHRNA7-202ENST00000437966 PLEKHG5O94827 1062 aa25.76■■□□□ 1.71
CHRNA7-202ENST00000437966 NEFLP07196 543 aa25.75■■□□□ 1.71
CHRNA7-202ENST00000437966 HMOX1P09601 288 aa25.75■■□□□ 1.71
CHRNA7-202ENST00000437966 DDX17Q92841 729 aaKnown RBP25.75■■□□□ 1.71
CHRNA7-202ENST00000437966 MAP3K19Q56UN5 1328 aa25.75■■□□□ 1.71
CHRNA7-202ENST00000437966 DMRT2Q9Y5R5 561 aa25.74■■□□□ 1.71
CHRNA7-202ENST00000437966 LRRC7Q96NW7 1537 aa25.74■■□□□ 1.71
CHRNA7-202ENST00000437966 HSP90AB2PQ58FF8 381 aa25.74■■□□□ 1.71
CHRNA7-202ENST00000437966 KRT28Q7Z3Y7 464 aa25.74■■□□□ 1.71
CHRNA7-202ENST00000437966 MSH6P52701 1360 aa25.74■■□□□ 1.71
CHRNA7-202ENST00000437966 GOLGA2Q08379 1002 aa25.73■■□□□ 1.71
CHRNA7-202ENST00000437966 CADPS2Q86UW7 1296 aa25.73■■□□□ 1.71
CHRNA7-202ENST00000437966 SPINK5Q9NQ38 1064 aaPredicted RBP25.73■■□□□ 1.71
CHRNA7-202ENST00000437966 XIRP1Q702N8 1843 aaKnown RBP25.72■■□□□ 1.71
CHRNA7-202ENST00000437966 IQSEC2Q5JU85 1478 aa25.72■■□□□ 1.71
CHRNA7-202ENST00000437966 PEAK1Q9H792 1746 aa25.72■■□□□ 1.71
CHRNA7-202ENST00000437966 EIF4A2Q14240 407 aaKnown RBP25.72■■□□□ 1.71
CHRNA7-202ENST00000437966 LMOD2Q6P5Q4 547 aa25.72■■□□□ 1.71
CHRNA7-202ENST00000437966 WWC1Q8IX03 1113 aa25.71■■□□□ 1.71
CHRNA7-202ENST00000437966 MARF1Q9Y4F3 1742 aaKnown RBP25.7■■□□□ 1.71
CHRNA7-202ENST00000437966 RSPH6AQ9H0K4 717 aa25.7■■□□□ 1.7
CHRNA7-202ENST00000437966 DCCP43146 1447 aa25.7■■□□□ 1.7
CHRNA7-202ENST00000437966 FCHSD2O94868 740 aa25.69■■□□□ 1.7
CHRNA7-202ENST00000437966 PRKAR2BP31323 418 aa25.69■■□□□ 1.7
CHRNA7-202ENST00000437966 AMPHP49418 695 aa25.69■■□□□ 1.7
CHRNA7-202ENST00000437966 MAPK8IP3Q9UPT6 1336 aa25.69■■□□□ 1.7
CHRNA7-202ENST00000437966 SLFN5Q08AF3 891 aa25.68■■□□□ 1.7
CHRNA7-202ENST00000437966 DUSP27Q5VZP5 1158 aa25.67■■□□□ 1.7
CHRNA7-202ENST00000437966 NGEFQ8N5V2 710 aa25.67■■□□□ 1.7
CHRNA7-202ENST00000437966 TMPOP42166 694 aaKnown RBP25.66■■□□□ 1.7
CHRNA7-202ENST00000437966 PHACTR3Q96KR7 559 aa25.65■■□□□ 1.7
CHRNA7-202ENST00000437966 ZBTB7CA1YPR0 619 aa25.64■■□□□ 1.7
CHRNA7-202ENST00000437966 SBNO1A3KN83 1393 aa25.64■■□□□ 1.7
CHRNA7-202ENST00000437966 KIF1AQ12756 1690 aa25.64■■□□□ 1.7
CHRNA7-202ENST00000437966 PNNQ9H307 717 aaKnown RBP25.64■■□□□ 1.7
CHRNA7-202ENST00000437966 AEBP1Q8IUX7 1158 aa25.64■■□□□ 1.69
CHRNA7-202ENST00000437966 RCAN3Q9UKA8 241 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms