RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 HAP1P54257 671 aaPredicted RBP20.95■□□□□ 0.94
TNFRSF1A-203ENST00000437813 NGDNQ8NEJ9 315 aaKnown RBP20.95■□□□□ 0.94
TNFRSF1A-203ENST00000437813 SRCAPQ6ZRS2 3230 aa20.95■□□□□ 0.94
TNFRSF1A-203ENST00000437813 PLEKHG3A1L390 1219 aa20.94■□□□□ 0.94
TNFRSF1A-203ENST00000437813 CCDC125Q86Z20 511 aa20.94■□□□□ 0.94
TNFRSF1A-203ENST00000437813 PLEKHG5O94827 1062 aa20.93■□□□□ 0.94
TNFRSF1A-203ENST00000437813 SEPT12Q8IYM1 358 aa20.93■□□□□ 0.94
TNFRSF1A-203ENST00000437813 CCDC61Q9Y6R9 512 aa20.92■□□□□ 0.94
TNFRSF1A-203ENST00000437813 TRPM1Q7Z4N2 1603 aa20.92■□□□□ 0.94
TNFRSF1A-203ENST00000437813 ACEP12821 1306 aa20.91■□□□□ 0.94
TNFRSF1A-203ENST00000437813 BLMP54132 1417 aaPredicted RBP20.91■□□□□ 0.94
TNFRSF1A-203ENST00000437813 L3MBTL2Q969R5 705 aa20.91■□□□□ 0.94
TNFRSF1A-203ENST00000437813 QRICH2Q9H0J4 1663 aa20.91■□□□□ 0.94
TNFRSF1A-203ENST00000437813 THSD7AQ9UPZ6 1657 aa20.9■□□□□ 0.94
TNFRSF1A-203ENST00000437813 BTG4Q9NY30 223 aa20.9■□□□□ 0.94
TNFRSF1A-203ENST00000437813 NBPF8Q3BBV2 869 aa20.89■□□□□ 0.93
TNFRSF1A-203ENST00000437813 CENPJQ9HC77 1338 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF1A-203ENST00000437813 NRKQ7Z2Y5 1582 aa20.88■□□□□ 0.93
TNFRSF1A-203ENST00000437813 SPATA31A5Q5VU36 1347 aa20.87■□□□□ 0.93
TNFRSF1A-203ENST00000437813 SPATA31A7Q8IWB4 1347 aa20.87■□□□□ 0.93
TNFRSF1A-203ENST00000437813 KIAA0232Q92628 1395 aa20.86■□□□□ 0.93
TNFRSF1A-203ENST00000437813 USP19O94966 1318 aa20.86■□□□□ 0.93
TNFRSF1A-203ENST00000437813 PAK3O75914 559 aaPredicted RBP20.86■□□□□ 0.93
TNFRSF1A-203ENST00000437813 SIN3AQ96ST3 1273 aa20.86■□□□□ 0.93
TNFRSF1A-203ENST00000437813 LMO7Q8WWI1 1683 aa20.86■□□□□ 0.93
TNFRSF1A-203ENST00000437813 KRT27Q7Z3Y8 459 aa20.84■□□□□ 0.93
TNFRSF1A-203ENST00000437813 PPIP5K1Q6PFW1 1433 aa20.84■□□□□ 0.93
TNFRSF1A-203ENST00000437813 PRDM11Q9NQV5 511 aa20.83■□□□□ 0.93
TNFRSF1A-203ENST00000437813 CCDC9Q9Y3X0 531 aaKnown RBP20.83■□□□□ 0.93
TNFRSF1A-203ENST00000437813 SSH2Q76I76 1423 aa20.82■□□□□ 0.92
TNFRSF1A-203ENST00000437813 FAM98CQ17RN3 349 aaKnown RBP20.82■□□□□ 0.92
TNFRSF1A-203ENST00000437813 CPDO75976 1380 aa20.82■□□□□ 0.92
TNFRSF1A-203ENST00000437813 CAMTA1Q9Y6Y1 1673 aa20.81■□□□□ 0.92
TNFRSF1A-203ENST00000437813 CABP2Q9NPB3 220 aa20.81■□□□□ 0.92
TNFRSF1A-203ENST00000437813 BRD4O60885 1362 aaPredicted RBP20.81■□□□□ 0.92
TNFRSF1A-203ENST00000437813 SPATA31A1Q5TZJ5 1347 aa20.8■□□□□ 0.92
TNFRSF1A-203ENST00000437813 CHRNA2Q15822 529 aa20.8■□□□□ 0.92
TNFRSF1A-203ENST00000437813 NUTM2GQ5VZR2 741 aa20.8■□□□□ 0.92
TNFRSF1A-203ENST00000437813 USP6P35125 1406 aa20.79■□□□□ 0.92
TNFRSF1A-203ENST00000437813 DEFB132Q7Z7B7 95 aa20.79■□□□□ 0.92
TNFRSF1A-203ENST00000437813 ZC3H6P61129 1189 aaKnown RBP20.78■□□□□ 0.92
TNFRSF1A-203ENST00000437813 SRPK2P78362 688 aaKnown RBP20.78■□□□□ 0.92
TNFRSF1A-203ENST00000437813 ABTB2Q8N961 1025 aa20.77■□□□□ 0.92
TNFRSF1A-203ENST00000437813 ZRANB1Q9UGI0 708 aa20.77■□□□□ 0.92
TNFRSF1A-203ENST00000437813 SLIT3O75094 1523 aa20.77■□□□□ 0.92
TNFRSF1A-203ENST00000437813 PIK3C2AO00443 1686 aa20.77■□□□□ 0.91
TNFRSF1A-203ENST00000437813 TNS1Q9HBL0 1735 aaKnown RBP20.75■□□□□ 0.91
TNFRSF1A-203ENST00000437813 CABP1Q9NZU7 370 aa20.75■□□□□ 0.91
TNFRSF1A-203ENST00000437813 RGPD1P0DJD0 1748 aa20.75■□□□□ 0.91
TNFRSF1A-203ENST00000437813 AKAP12Q02952 1782 aa20.74■□□□□ 0.91
TNFRSF1A-203ENST00000437813 ROCK2O75116 1388 aaKnown RBP20.73■□□□□ 0.91
TNFRSF1A-203ENST00000437813 DISP2A7MBM2 1401 aa20.73■□□□□ 0.91
TNFRSF1A-203ENST00000437813 COL18A1P39060 1754 aa20.73■□□□□ 0.91
TNFRSF1A-203ENST00000437813 GCP02774 474 aa20.73■□□□□ 0.91
TNFRSF1A-203ENST00000437813 NEUROD1Q13562 356 aa20.72■□□□□ 0.91
TNFRSF1A-203ENST00000437813 FAM182BQ5T319 152 aa20.72■□□□□ 0.91
TNFRSF1A-203ENST00000437813 BARGINQ6ZT62 677 aa20.72■□□□□ 0.91
TNFRSF1A-203ENST00000437813 NLRP13Q86W25 1043 aa20.72■□□□□ 0.91
TNFRSF1A-203ENST00000437813 EVC2Q86UK5 1308 aa20.72■□□□□ 0.91
TNFRSF1A-203ENST00000437813 SBNO2Q9Y2G9 1366 aa20.72■□□□□ 0.91
TNFRSF1A-203ENST00000437813 COL5A2P05997 1499 aaPredicted RBP20.71■□□□□ 0.91
TNFRSF1A-203ENST00000437813 CPSF1Q10570 1443 aaKnown RBP20.7■□□□□ 0.9
TNFRSF1A-203ENST00000437813 A0A0G2JS52 829 aa20.7■□□□□ 0.9
TNFRSF1A-203ENST00000437813 MYT1Q01538 1121 aa20.7■□□□□ 0.9
TNFRSF1A-203ENST00000437813 STRN4Q9NRL3 753 aa20.7■□□□□ 0.9
TNFRSF1A-203ENST00000437813 LARP1Q6PKG0 1096 aaKnown RBP20.69■□□□□ 0.9
TNFRSF1A-203ENST00000437813 PARP4Q9UKK3 1724 aaKnown RBP20.67■□□□□ 0.9
TNFRSF1A-203ENST00000437813 SF3B2Q13435 895 aaKnown RBP20.67■□□□□ 0.9
TNFRSF1A-203ENST00000437813 AATKQ6ZMQ8 1374 aa20.67■□□□□ 0.9
TNFRSF1A-203ENST00000437813 MON2Q7Z3U7 1717 aa20.66■□□□□ 0.9
TNFRSF1A-203ENST00000437813 BAG6P46379 1132 aa20.65■□□□□ 0.9
TNFRSF1A-203ENST00000437813 NLRP6P59044 892 aa20.65■□□□□ 0.9
TNFRSF1A-203ENST00000437813 USP54Q70EL1 1684 aa20.64■□□□□ 0.9
TNFRSF1A-203ENST00000437813 LRP5O75197 1615 aa20.64■□□□□ 0.9
TNFRSF1A-203ENST00000437813 CD163L1Q9NR16 1453 aa20.64■□□□□ 0.89
TNFRSF1A-203ENST00000437813 TTC21BQ7Z4L5 1316 aa20.64■□□□□ 0.89
TNFRSF1A-203ENST00000437813 TCP11L2Q8N4U5 519 aa20.64■□□□□ 0.89
TNFRSF1A-203ENST00000437813 NFAT5O94916 1531 aa20.63■□□□□ 0.89
TNFRSF1A-203ENST00000437813 CRB1P82279 1406 aa20.63■□□□□ 0.89
TNFRSF1A-203ENST00000437813 ZNF692Q9BU19 519 aaPredicted RBP20.63■□□□□ 0.89
TNFRSF1A-203ENST00000437813 THRAP3Q9Y2W1 955 aaKnown RBP20.63■□□□□ 0.89
TNFRSF1A-203ENST00000437813 PEAK1Q9H792 1746 aa20.63■□□□□ 0.89
TNFRSF1A-203ENST00000437813 EVA1CP58658 441 aa20.62■□□□□ 0.89
TNFRSF1A-203ENST00000437813 EN1Q05925 392 aaPredicted RBP20.62■□□□□ 0.89
TNFRSF1A-203ENST00000437813 USP35Q9P2H5 1018 aa20.62■□□□□ 0.89
TNFRSF1A-203ENST00000437813 FAM196AQ6ZSG2 479 aa20.61■□□□□ 0.89
TNFRSF1A-203ENST00000437813 WNK3Q9BYP7 1800 aa20.61■□□□□ 0.89
TNFRSF1A-203ENST00000437813 TTC21AQ8NDW8 1320 aa20.6■□□□□ 0.89
TNFRSF1A-203ENST00000437813 RGPD5Q99666 1765 aa20.6■□□□□ 0.89
TNFRSF1A-203ENST00000437813 ARHGEF25Q86VW2 580 aa20.6■□□□□ 0.89
TNFRSF1A-203ENST00000437813 CAMKK2Q96RR4 588 aa20.6■□□□□ 0.89
TNFRSF1A-203ENST00000437813 AXIN2Q9Y2T1 843 aa20.6■□□□□ 0.89
TNFRSF1A-203ENST00000437813 LRRC37A3O60309 1634 aa20.6■□□□□ 0.89
TNFRSF1A-203ENST00000437813 RREB1Q92766 1687 aa20.59■□□□□ 0.89
TNFRSF1A-203ENST00000437813 TRIM37O94972 964 aa20.58■□□□□ 0.89
TNFRSF1A-203ENST00000437813 ABCC6O95255 1503 aa20.58■□□□□ 0.88
TNFRSF1A-203ENST00000437813 CARD11Q9BXL7 1154 aa20.57■□□□□ 0.88
TNFRSF1A-203ENST00000437813 USP31Q70CQ4 1352 aa20.57■□□□□ 0.88
TNFRSF1A-203ENST00000437813 KTN1Q86UP2 1357 aaKnown RBP20.57■□□□□ 0.88
TNFRSF1A-203ENST00000437813 WDR17Q8IZU2 1322 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms