RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 CENPJQ9HC77 1338 aaPredicted RBP9.82□□□□□ -0.84
LSM3P3-201ENST00000436601 IQGAP1P46940 1657 aa9.81□□□□□ -0.84
LSM3P3-201ENST00000436601 SIRT1Q96EB6 747 aa9.81□□□□□ -0.84
LSM3P3-201ENST00000436601 PRAM1Q96QH2 718 aa9.81□□□□□ -0.84
LSM3P3-201ENST00000436601 PHF8Q9UPP1 1060 aa9.81□□□□□ -0.84
LSM3P3-201ENST00000436601 SETD1BQ9UPS6 1966 aaKnown RBP9.81□□□□□ -0.84
LSM3P3-201ENST00000436601 KIF7Q2M1P5 1343 aa9.81□□□□□ -0.84
LSM3P3-201ENST00000436601 CCDC7Q96M83 1385 aa9.8□□□□□ -0.84
LSM3P3-201ENST00000436601 SETD1AO15047 1707 aaKnown RBP9.8□□□□□ -0.84
LSM3P3-201ENST00000436601 WAPLQ7Z5K2 1190 aa9.8□□□□□ -0.84
LSM3P3-201ENST00000436601 AMOTL2Q9Y2J4 779 aa9.8□□□□□ -0.84
LSM3P3-201ENST00000436601 TECPR2O15040 1411 aa9.8□□□□□ -0.84
LSM3P3-201ENST00000436601 PIK3R4Q99570 1358 aa9.79□□□□□ -0.84
LSM3P3-201ENST00000436601 ROBO2Q9HCK4 1378 aa9.79□□□□□ -0.84
LSM3P3-201ENST00000436601 DISP3Q9P2K9 1392 aa9.79□□□□□ -0.84
LSM3P3-201ENST00000436601 PLEKHH1Q9ULM0 1364 aa9.79□□□□□ -0.84
LSM3P3-201ENST00000436601 SBNO2Q9Y2G9 1366 aa9.78□□□□□ -0.84
LSM3P3-201ENST00000436601 DLC1Q96QB1 1528 aa9.78□□□□□ -0.84
LSM3P3-201ENST00000436601 TMF1P82094 1093 aa9.78□□□□□ -0.84
LSM3P3-201ENST00000436601 DDX10Q13206 875 aaKnown RBP9.78□□□□□ -0.84
LSM3P3-201ENST00000436601 SAFB2Q14151 953 aaKnown RBP eCLIP9.78□□□□□ -0.84
LSM3P3-201ENST00000436601 POGKQ9P215 609 aa9.78□□□□□ -0.84
LSM3P3-201ENST00000436601 FAM135BQ49AJ0 1406 aa9.78□□□□□ -0.84
LSM3P3-201ENST00000436601 DIP2AQ14689 1571 aa9.78□□□□□ -0.84
LSM3P3-201ENST00000436601 TESPA1A2RU30 521 aaPredicted RBP9.77□□□□□ -0.85
LSM3P3-201ENST00000436601 KCNA6P17658 529 aa9.77□□□□□ -0.85
LSM3P3-201ENST00000436601 PDE4AP27815 886 aa9.76□□□□□ -0.85
LSM3P3-201ENST00000436601 MINK1Q8N4C8 1332 aaPredicted RBP9.76□□□□□ -0.85
LSM3P3-201ENST00000436601 DIEXFQ68CQ4 756 aaKnown RBP9.75□□□□□ -0.85
LSM3P3-201ENST00000436601 POLR3GLQ9BT43 218 aa9.75□□□□□ -0.85
LSM3P3-201ENST00000436601 CPS1P31327 1500 aa9.75□□□□□ -0.85
LSM3P3-201ENST00000436601 PTCH1Q13635 1447 aa9.74□□□□□ -0.85
LSM3P3-201ENST00000436601 MFSD10Q14728 455 aa9.74□□□□□ -0.85
LSM3P3-201ENST00000436601 CDCA8Q53HL2 280 aa9.74□□□□□ -0.85
LSM3P3-201ENST00000436601 ZC3H15Q8WU90 426 aaKnown RBP9.74□□□□□ -0.85
LSM3P3-201ENST00000436601 ARIH1Q9Y4X5 557 aaPredicted RBP9.74□□□□□ -0.85
LSM3P3-201ENST00000436601 EVC2Q86UK5 1308 aa9.74□□□□□ -0.85
LSM3P3-201ENST00000436601 ARHGEF28Q8N1W1 1705 aaKnown RBP9.73□□□□□ -0.85
LSM3P3-201ENST00000436601 SMYD5Q6GMV2 418 aa9.73□□□□□ -0.85
LSM3P3-201ENST00000436601 PUS7Q96PZ0 661 aaKnown RBP9.73□□□□□ -0.85
LSM3P3-201ENST00000436601 CDK19Q9BWU1 502 aa9.73□□□□□ -0.85
LSM3P3-201ENST00000436601 POLR1AO95602 1720 aaPredicted RBP9.73□□□□□ -0.85
LSM3P3-201ENST00000436601 TULP4Q9NRJ4 1543 aa9.72□□□□□ -0.85
LSM3P3-201ENST00000436601 SEMA3EO15041 775 aa9.72□□□□□ -0.85
LSM3P3-201ENST00000436601 PIP4P2Q8N4L2 257 aa9.72□□□□□ -0.85
LSM3P3-201ENST00000436601 RBM33Q96EV2 1170 aaKnown RBP9.72□□□□□ -0.85
LSM3P3-201ENST00000436601 XRN1Q8IZH2 1706 aaKnown RBP9.72□□□□□ -0.85
LSM3P3-201ENST00000436601 KNDC1Q76NI1 1749 aa9.71□□□□□ -0.85
LSM3P3-201ENST00000436601 STRCQ7RTU9 1775 aa9.71□□□□□ -0.85
LSM3P3-201ENST00000436601 WASLO00401 505 aaPredicted RBP9.71□□□□□ -0.86
LSM3P3-201ENST00000436601 CHRDL2Q6WN34 429 aa9.71□□□□□ -0.86
LSM3P3-201ENST00000436601 LARP6Q9BRS8 491 aaKnown RBP9.71□□□□□ -0.86
LSM3P3-201ENST00000436601 CRISPLD2Q9H0B8 497 aa9.71□□□□□ -0.86
LSM3P3-201ENST00000436601 ZRANB1Q9UGI0 708 aa9.71□□□□□ -0.86
LSM3P3-201ENST00000436601 QRICH2Q9H0J4 1663 aa9.71□□□□□ -0.86
LSM3P3-201ENST00000436601 BRPF1P55201 1214 aaPredicted RBP9.7□□□□□ -0.86
LSM3P3-201ENST00000436601 SRPK2P78362 688 aaKnown RBP9.7□□□□□ -0.86
LSM3P3-201ENST00000436601 GOLGA2Q08379 1002 aa9.7□□□□□ -0.86
LSM3P3-201ENST00000436601 MS4A4AQ96JQ5 239 aa9.7□□□□□ -0.86
LSM3P3-201ENST00000436601 NWD1Q149M9 1564 aa9.7□□□□□ -0.86
LSM3P3-201ENST00000436601 PROSER2Q86WR7 435 aaPredicted RBP9.69□□□□□ -0.86
LSM3P3-201ENST00000436601 DDX27Q96GQ7 796 aaKnown RBP9.69□□□□□ -0.86
LSM3P3-201ENST00000436601 SLC12A5Q9H2X9 1139 aa9.69□□□□□ -0.86
LSM3P3-201ENST00000436601 ZNF335Q9H4Z2 1342 aaPredicted RBP9.69□□□□□ -0.86
LSM3P3-201ENST00000436601 PANK3Q9H999 370 aa9.69□□□□□ -0.86
LSM3P3-201ENST00000436601 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.68□□□□□ -0.86
LSM3P3-201ENST00000436601 PRR36Q9H6K5 1346 aa9.68□□□□□ -0.86
LSM3P3-201ENST00000436601 PER1O15534 1290 aaPredicted RBP9.68□□□□□ -0.86
LSM3P3-201ENST00000436601 NKTRP30414 1462 aaKnown RBP9.67□□□□□ -0.86
LSM3P3-201ENST00000436601 ATAD2Q6PL18 1390 aa9.67□□□□□ -0.86
LSM3P3-201ENST00000436601 CD44P16070 742 aaKnown RBP9.67□□□□□ -0.86
LSM3P3-201ENST00000436601 CAMK2BQ13554 666 aa9.67□□□□□ -0.86
LSM3P3-201ENST00000436601 TMC1Q8TDI8 760 aa9.67□□□□□ -0.86
LSM3P3-201ENST00000436601 NUDT16Q96DE0 195 aaKnown RBP9.67□□□□□ -0.86
LSM3P3-201ENST00000436601 CARD14Q9BXL6 1004 aa9.67□□□□□ -0.86
LSM3P3-201ENST00000436601 CHD2O14647 1828 aaKnown RBP9.67□□□□□ -0.86
LSM3P3-201ENST00000436601 ADGRB2O60241 1585 aa9.67□□□□□ -0.86
LSM3P3-201ENST00000436601 TMEM94Q12767 1356 aa9.66□□□□□ -0.86
LSM3P3-201ENST00000436601 TMEM106CQ9BVX2 250 aa9.66□□□□□ -0.86
LSM3P3-201ENST00000436601 CABP1Q9NZU7 370 aa9.66□□□□□ -0.86
LSM3P3-201ENST00000436601 ADGRL3Q9HAR2 1447 aa9.65□□□□□ -0.86
LSM3P3-201ENST00000436601 NUTM2FA1L443 756 aa9.65□□□□□ -0.86
LSM3P3-201ENST00000436601 NCOA3Q9Y6Q9 1424 aa9.65□□□□□ -0.87
LSM3P3-201ENST00000436601 NINLQ9Y2I6 1382 aa9.64□□□□□ -0.87
LSM3P3-201ENST00000436601 MKRN3Q13064 507 aaKnown RBP9.64□□□□□ -0.87
LSM3P3-201ENST00000436601 C14orf37Q86TY3 774 aa9.64□□□□□ -0.87
LSM3P3-201ENST00000436601 PHF12Q96QT6 1004 aa9.64□□□□□ -0.87
LSM3P3-201ENST00000436601 C19orf44Q9H6X5 657 aa9.64□□□□□ -0.87
LSM3P3-201ENST00000436601 LRRC7Q96NW7 1537 aa9.63□□□□□ -0.87
LSM3P3-201ENST00000436601 PLEKHG3A1L390 1219 aa9.63□□□□□ -0.87
LSM3P3-201ENST00000436601 ZMYND10O75800 440 aa9.63□□□□□ -0.87
LSM3P3-201ENST00000436601 SLC24A3Q9HC58 644 aa9.63□□□□□ -0.87
LSM3P3-201ENST00000436601 ATP7BP35670 1465 aa9.63□□□□□ -0.87
LSM3P3-201ENST00000436601 CD163L1Q9NR16 1453 aa9.63□□□□□ -0.87
LSM3P3-201ENST00000436601 PPIP5K1Q6PFW1 1433 aa9.63□□□□□ -0.87
LSM3P3-201ENST00000436601 STRCP1A6NGW2 1772 aa9.63□□□□□ -0.87
LSM3P3-201ENST00000436601 ANKRD36BQ8N2N9 1353 aa9.63□□□□□ -0.87
LSM3P3-201ENST00000436601 MYOM1P52179 1685 aa9.62□□□□□ -0.87
LSM3P3-201ENST00000436601 ANP32CO43423 234 aa9.62□□□□□ -0.87
LSM3P3-201ENST00000436601 NEUROD2Q15784 382 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms