RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 SSH2Q76I76 1423 aa23.1■■□□□ 1.29
CALD1-209ENST00000436461 EDC4Q6P2E9 1401 aaKnown RBP23.09■■□□□ 1.29
CALD1-209ENST00000436461 SOS2Q07890 1332 aaPredicted RBP23.09■■□□□ 1.29
CALD1-209ENST00000436461 CNGB1Q14028 1251 aaPredicted RBP23.08■■□□□ 1.29
CALD1-209ENST00000436461 TTC21BQ7Z4L5 1316 aa23.08■■□□□ 1.29
CALD1-209ENST00000436461 PER1O15534 1290 aaPredicted RBP23.08■■□□□ 1.28
CALD1-209ENST00000436461 COL16A1Q07092 1604 aaPredicted RBP23.07■■□□□ 1.28
CALD1-209ENST00000436461 PIK3C2AO00443 1686 aa23.07■■□□□ 1.28
CALD1-209ENST00000436461 KIF20BQ96Q89 1820 aa23.06■■□□□ 1.28
CALD1-209ENST00000436461 LMOD2Q6P5Q4 547 aa23.06■■□□□ 1.28
CALD1-209ENST00000436461 ALS2Q96Q42 1657 aa23.05■■□□□ 1.28
CALD1-209ENST00000436461 PLEKHG5O94827 1062 aa23.05■■□□□ 1.28
CALD1-209ENST00000436461 NUTM2GQ5VZR2 741 aa23.05■■□□□ 1.28
CALD1-209ENST00000436461 NME9Q86XW9 330 aa23.05■■□□□ 1.28
CALD1-209ENST00000436461 ZRANB1Q9UGI0 708 aa23.05■■□□□ 1.28
CALD1-209ENST00000436461 KNSTRNQ9Y448 316 aa23.04■■□□□ 1.28
CALD1-209ENST00000436461 TNS3Q68CZ2 1445 aa23.03■■□□□ 1.28
CALD1-209ENST00000436461 HSPA1LP34931 641 aa23.02■■□□□ 1.28
CALD1-209ENST00000436461 ABTB2Q8N961 1025 aa23.02■■□□□ 1.28
CALD1-209ENST00000436461 GGNBP2Q9H3C7 697 aa23.02■■□□□ 1.28
CALD1-209ENST00000436461 SPATA31A3Q5VYP0 1347 aa23.02■■□□□ 1.28
CALD1-209ENST00000436461 SBNO1A3KN83 1393 aa23.02■■□□□ 1.28
CALD1-209ENST00000436461 MARF1Q9Y4F3 1742 aaKnown RBP23.01■■□□□ 1.27
CALD1-209ENST00000436461 TTC21AQ8NDW8 1320 aa23.01■■□□□ 1.27
CALD1-209ENST00000436461 FYB1O15117 783 aa23■■□□□ 1.27
CALD1-209ENST00000436461 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
CALD1-209ENST00000436461 CGNL1Q0VF96 1302 aa23■■□□□ 1.27
CALD1-209ENST00000436461 CC2D1BQ5T0F9 858 aaKnown RBP23■■□□□ 1.27
CALD1-209ENST00000436461 BRD4O60885 1362 aaPredicted RBP22.99■■□□□ 1.27
CALD1-209ENST00000436461 FBXO41Q8TF61 875 aa22.99■■□□□ 1.27
CALD1-209ENST00000436461 NLRP6P59044 892 aa22.97■■□□□ 1.27
CALD1-209ENST00000436461 LRRC59Q96AG4 307 aaKnown RBP22.97■■□□□ 1.27
CALD1-209ENST00000436461 ANKRD26Q9UPS8 1709 aa22.97■■□□□ 1.27
CALD1-209ENST00000436461 CABLES1Q8TDN4 633 aa22.95■■□□□ 1.26
CALD1-209ENST00000436461 OVOS2A0A0J9YW53 1432 aa22.94■■□□□ 1.26
CALD1-209ENST00000436461 OVOS2Q6IE36 1432 aa22.94■■□□□ 1.26
CALD1-209ENST00000436461 MED1Q15648 1581 aaPredicted RBP22.94■■□□□ 1.26
CALD1-209ENST00000436461 SOX12O15370 315 aa22.93■■□□□ 1.26
CALD1-209ENST00000436461 ARHGEF10O15013 1369 aa22.93■■□□□ 1.26
CALD1-209ENST00000436461 PNPLA6Q8IY17 1366 aa22.93■■□□□ 1.26
CALD1-209ENST00000436461 CRYBG1Q9Y4K1 1723 aa22.93■■□□□ 1.26
CALD1-209ENST00000436461 USP54Q70EL1 1684 aa22.93■■□□□ 1.26
CALD1-209ENST00000436461 PHRF1Q9P1Y6 1649 aaKnown RBP22.92■■□□□ 1.26
CALD1-209ENST00000436461 FBLN1P23142 703 aa22.92■■□□□ 1.26
CALD1-209ENST00000436461 COG3Q96JB2 828 aa22.92■■□□□ 1.26
CALD1-209ENST00000436461 USP31Q70CQ4 1352 aa22.92■■□□□ 1.26
CALD1-209ENST00000436461 ABCA3Q99758 1704 aa22.91■■□□□ 1.26
CALD1-209ENST00000436461 TNNT2P45379 298 aaPredicted RBP22.91■■□□□ 1.26
CALD1-209ENST00000436461 NLRP13Q86W25 1043 aa22.91■■□□□ 1.26
CALD1-209ENST00000436461 SHPRHQ149N8 1683 aa22.9■■□□□ 1.26
CALD1-209ENST00000436461 NSD2O96028 1365 aa22.9■■□□□ 1.26
CALD1-209ENST00000436461 COL22A1Q8NFW1 1626 aaPredicted RBP22.9■■□□□ 1.26
CALD1-209ENST00000436461 DIEXFQ68CQ4 756 aaKnown RBP22.89■■□□□ 1.25
CALD1-209ENST00000436461 NPC1L1Q9UHC9 1359 aa22.88■■□□□ 1.25
CALD1-209ENST00000436461 MORC1Q86VD1 984 aa22.88■■□□□ 1.25
CALD1-209ENST00000436461 USP19O94966 1318 aa22.88■■□□□ 1.25
CALD1-209ENST00000436461 JCADQ9P266 1359 aa22.87■■□□□ 1.25
CALD1-209ENST00000436461 SLIT3O75094 1523 aa22.87■■□□□ 1.25
CALD1-209ENST00000436461 NUTM2BA6NNL0 878 aaPredicted RBP22.84■■□□□ 1.25
CALD1-209ENST00000436461 NUTM2EB1AL46 878 aaPredicted RBP22.84■■□□□ 1.25
CALD1-209ENST00000436461 GCP02774 474 aa22.84■■□□□ 1.25
CALD1-209ENST00000436461 NUTM2AQ8IVF1 878 aaPredicted RBP22.84■■□□□ 1.25
CALD1-209ENST00000436461 MAP2P11137 1827 aaKnown RBP22.84■■□□□ 1.25
CALD1-209ENST00000436461 NFAT5O94916 1531 aa22.84■■□□□ 1.25
CALD1-209ENST00000436461 HAP1P54257 671 aaPredicted RBP22.83■■□□□ 1.25
CALD1-209ENST00000436461 LTN1O94822 1766 aa22.83■■□□□ 1.24
CALD1-209ENST00000436461 PARD3Q8TEW0 1356 aa22.82■■□□□ 1.24
CALD1-209ENST00000436461 ZBTB7CA1YPR0 619 aa22.82■■□□□ 1.24
CALD1-209ENST00000436461 ZC3H6P61129 1189 aaKnown RBP22.82■■□□□ 1.24
CALD1-209ENST00000436461 RRS1Q15050 365 aaKnown RBP22.82■■□□□ 1.24
CALD1-209ENST00000436461 PRKRIP1Q9H875 184 aaPredicted RBP22.82■■□□□ 1.24
CALD1-209ENST00000436461 ANP32CO43423 234 aa22.79■■□□□ 1.24
CALD1-209ENST00000436461 KCNH5Q8NCM2 988 aa22.79■■□□□ 1.24
CALD1-209ENST00000436461 LRP6O75581 1613 aa22.78■■□□□ 1.24
CALD1-209ENST00000436461 ADAMTS2O95450 1211 aa22.78■■□□□ 1.24
CALD1-209ENST00000436461 EMILIN1Q9Y6C2 1016 aa22.78■■□□□ 1.24
CALD1-209ENST00000436461 KIAA0232Q92628 1395 aa22.77■■□□□ 1.24
CALD1-209ENST00000436461 ILDR1Q86SU0 546 aaPredicted RBP22.77■■□□□ 1.24
CALD1-209ENST00000436461 PEAK1Q9H792 1746 aa22.77■■□□□ 1.24
CALD1-209ENST00000436461 MAP3K19Q56UN5 1328 aa22.76■■□□□ 1.23
CALD1-209ENST00000436461 RALBP1Q15311 655 aa22.76■■□□□ 1.23
CALD1-209ENST00000436461 PPM1GO15355 546 aaPredicted RBP22.75■■□□□ 1.23
CALD1-209ENST00000436461 PPP2R1AP30153 589 aa22.75■■□□□ 1.23
CALD1-209ENST00000436461 CHRNA2Q15822 529 aa22.75■■□□□ 1.23
CALD1-209ENST00000436461 AATKQ6ZMQ8 1374 aa22.75■■□□□ 1.23
CALD1-209ENST00000436461 SPATA31A6Q5VVP1 1343 aa22.75■■□□□ 1.23
CALD1-209ENST00000436461 POLKQ9UBT6 870 aa22.75■■□□□ 1.23
CALD1-209ENST00000436461 RGPD5Q99666 1765 aa22.74■■□□□ 1.23
CALD1-209ENST00000436461 ARHGEF25Q86VW2 580 aa22.74■■□□□ 1.23
CALD1-209ENST00000436461 PRDM11Q9NQV5 511 aa22.72■■□□□ 1.23
CALD1-209ENST00000436461 MTHFSP49914 203 aa22.71■■□□□ 1.23
CALD1-209ENST00000436461 COL18A1P39060 1754 aa22.71■■□□□ 1.23
CALD1-209ENST00000436461 MYBBP1AQ9BQG0 1328 aaKnown RBP22.71■■□□□ 1.23
CALD1-209ENST00000436461 CPDO75976 1380 aa22.71■■□□□ 1.23
CALD1-209ENST00000436461 FAM83GA6ND36 823 aa22.7■■□□□ 1.22
CALD1-209ENST00000436461 AMPHP49418 695 aa22.7■■□□□ 1.22
CALD1-209ENST00000436461 MIER1Q8N108 512 aa22.69■■□□□ 1.22
CALD1-209ENST00000436461 AXIN2Q9Y2T1 843 aa22.68■■□□□ 1.22
CALD1-209ENST00000436461 SMG6Q86US8 1419 aaKnown RBP22.68■■□□□ 1.22
CALD1-209ENST00000436461 PLCH1Q4KWH8 1693 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms