RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 PLEKHG3A1L390 1219 aa9.52□□□□□ -0.89
LINC00353-201ENST00000435401 LCE2AQ5TA79 106 aaPredicted RBP9.52□□□□□ -0.89
LINC00353-201ENST00000435401 SLC24A3Q9HC58 644 aa9.52□□□□□ -0.89
LINC00353-201ENST00000435401 SNRPBP14678 240 aaKnown RBP9.51□□□□□ -0.89
LINC00353-201ENST00000435401 TUSC1Q2TAM9 212 aa9.51□□□□□ -0.89
LINC00353-201ENST00000435401 MPNDQ8N594 471 aa9.51□□□□□ -0.89
LINC00353-201ENST00000435401 WFS1O76024 890 aa9.5□□□□□ -0.89
LINC00353-201ENST00000435401 CSPP1Q1MSJ5 1256 aa9.5□□□□□ -0.89
LINC00353-201ENST00000435401 MYSM1Q5VVJ2 828 aa9.5□□□□□ -0.89
LINC00353-201ENST00000435401 CABLES1Q8TDN4 633 aa9.5□□□□□ -0.89
LINC00353-201ENST00000435401 CAPN5O15484 640 aaPredicted RBP9.49□□□□□ -0.89
LINC00353-201ENST00000435401 NUTM2BA6NNL0 878 aaPredicted RBP9.48□□□□□ -0.89
LINC00353-201ENST00000435401 NUTM2EB1AL46 878 aaPredicted RBP9.48□□□□□ -0.89
LINC00353-201ENST00000435401 F12P00748 615 aaPredicted RBP9.48□□□□□ -0.89
LINC00353-201ENST00000435401 NUTM2DQ5VT03 806 aaPredicted RBP9.48□□□□□ -0.89
LINC00353-201ENST00000435401 NUTM2AQ8IVF1 878 aaPredicted RBP9.48□□□□□ -0.89
LINC00353-201ENST00000435401 LIMD1Q9UGP4 676 aa9.48□□□□□ -0.89
LINC00353-201ENST00000435401 LILRB3O75022 631 aa9.47□□□□□ -0.89
LINC00353-201ENST00000435401 TLL2Q9Y6L7 1015 aa9.47□□□□□ -0.89
LINC00353-201ENST00000435401 NFX1Q12986 1120 aaKnown RBP9.46□□□□□ -0.9
LINC00353-201ENST00000435401 FAM174AQ8TBP5 190 aa9.46□□□□□ -0.9
LINC00353-201ENST00000435401 RSPH6AQ9H0K4 717 aa9.46□□□□□ -0.9
LINC00353-201ENST00000435401 MAP10Q9P2G4 905 aa9.46□□□□□ -0.9
LINC00353-201ENST00000435401 TERTO14746 1132 aaKnown RBP9.44□□□□□ -0.9
LINC00353-201ENST00000435401 PER1O15534 1290 aaPredicted RBP9.44□□□□□ -0.9
LINC00353-201ENST00000435401 NNTQ13423 1086 aa9.44□□□□□ -0.9
LINC00353-201ENST00000435401 QPCTQ16769 361 aa9.44□□□□□ -0.9
LINC00353-201ENST00000435401 TSC1Q92574 1164 aa9.44□□□□□ -0.9
LINC00353-201ENST00000435401 TRIM46Q7Z4K8 759 aa9.43□□□□□ -0.9
LINC00353-201ENST00000435401 ARMC2Q8NEN0 867 aa9.43□□□□□ -0.9
LINC00353-201ENST00000435401 FOXJ1Q92949 421 aa9.43□□□□□ -0.9
LINC00353-201ENST00000435401 BMP1P13497 986 aa9.42□□□□□ -0.9
LINC00353-201ENST00000435401 CLK2P49760 499 aaKnown RBP9.42□□□□□ -0.9
LINC00353-201ENST00000435401 AGERQ15109 404 aa9.42□□□□□ -0.9
LINC00353-201ENST00000435401 BPHLQ86WA6 291 aaPredicted RBP9.42□□□□□ -0.9
LINC00353-201ENST00000435401 CDK15Q96Q40 435 aa9.42□□□□□ -0.9
LINC00353-201ENST00000435401 ADH1CP00326 375 aa9.41□□□□□ -0.9
LINC00353-201ENST00000435401 RTL5Q5HYW3 569 aaPredicted RBP9.41□□□□□ -0.9
LINC00353-201ENST00000435401 HELBQ8NG08 1087 aaPredicted RBP9.41□□□□□ -0.9
LINC00353-201ENST00000435401 WIPF1O43516 503 aa9.39□□□□□ -0.91
LINC00353-201ENST00000435401 WDR4P57081 412 aaKnown RBP9.39□□□□□ -0.91
LINC00353-201ENST00000435401 ARID5BQ14865 1188 aa9.39□□□□□ -0.91
LINC00353-201ENST00000435401 POLR3EQ9NVU0 708 aa9.39□□□□□ -0.91
LINC00353-201ENST00000435401 TIMP2P16035 220 aa9.38□□□□□ -0.91
LINC00353-201ENST00000435401 ZFP42Q96MM3 310 aa9.38□□□□□ -0.91
LINC00353-201ENST00000435401 KLF16Q9BXK1 252 aaPredicted RBP9.38□□□□□ -0.91
LINC00353-201ENST00000435401 NR5A1Q13285 461 aa9.37□□□□□ -0.91
LINC00353-201ENST00000435401 C4orf48Q5BLP8 95 aa9.37□□□□□ -0.91
LINC00353-201ENST00000435401 NBPF14Q5TI25 921 aa9.37□□□□□ -0.91
LINC00353-201ENST00000435401 MRPL14Q6P1L8 145 aaKnown RBP9.37□□□□□ -0.91
LINC00353-201ENST00000435401 SLC16A10Q8TF71 515 aa9.37□□□□□ -0.91
LINC00353-201ENST00000435401 NXF1Q9UBU9 619 aaKnown RBP9.37□□□□□ -0.91
LINC00353-201ENST00000435401 INSM1Q01101 510 aaPredicted RBP9.36□□□□□ -0.91
LINC00353-201ENST00000435401 SCARF1Q14162 830 aa9.36□□□□□ -0.91
LINC00353-201ENST00000435401 GRM5P41594 1212 aa9.35□□□□□ -0.91
LINC00353-201ENST00000435401 NPAS3Q8IXF0 933 aa9.35□□□□□ -0.91
LINC00353-201ENST00000435401 SKIV2LQ15477 1246 aaKnown RBP9.34□□□□□ -0.91
LINC00353-201ENST00000435401 SH3RF1Q7Z6J0 888 aa9.34□□□□□ -0.91
LINC00353-201ENST00000435401 GPKOWQ92917 476 aaPredicted RBP eCLIP9.34□□□□□ -0.91
LINC00353-201ENST00000435401 ZIC2O95409 532 aaPredicted RBP9.33□□□□□ -0.92
LINC00353-201ENST00000435401 C1QTNF2Q9BXJ5 285 aa9.33□□□□□ -0.92
LINC00353-201ENST00000435401 NR3C2P08235 984 aa9.32□□□□□ -0.92
LINC00353-201ENST00000435401 CTDSPL2Q05D32 466 aa9.32□□□□□ -0.92
LINC00353-201ENST00000435401 LCE2CQ5TA81 110 aa9.32□□□□□ -0.92
LINC00353-201ENST00000435401 SH3BP5LQ7L8J4 393 aa9.32□□□□□ -0.92
LINC00353-201ENST00000435401 BCANQ96GW7 911 aa9.32□□□□□ -0.92
LINC00353-201ENST00000435401 PURBQ96QR8 312 aaKnown RBP9.32□□□□□ -0.92
LINC00353-201ENST00000435401 SH3D19Q5HYK7 790 aa9.31□□□□□ -0.92
LINC00353-201ENST00000435401 TRMT44Q8IYL2 757 aaKnown RBP9.31□□□□□ -0.92
LINC00353-201ENST00000435401 ITPKCQ96DU7 683 aa9.31□□□□□ -0.92
LINC00353-201ENST00000435401 DDRGK1Q96HY6 314 aa9.31□□□□□ -0.92
LINC00353-201ENST00000435401 KDM4CQ9H3R0 1056 aa9.31□□□□□ -0.92
LINC00353-201ENST00000435401 MAP4K5Q9Y4K4 846 aa9.31□□□□□ -0.92
LINC00353-201ENST00000435401 VASH1Q7L8A9 365 aaPredicted RBP9.3□□□□□ -0.92
LINC00353-201ENST00000435401 ZFAND3Q9H8U3 227 aa9.3□□□□□ -0.92
LINC00353-201ENST00000435401 STK17AQ9UEE5 414 aa9.3□□□□□ -0.92
LINC00353-201ENST00000435401 MAGEB6P1A0A0J9YX57 407 aa9.29□□□□□ -0.92
LINC00353-201ENST00000435401 IRF7Q92985 503 aa9.29□□□□□ -0.92
LINC00353-201ENST00000435401 GPBP1L1Q9HC44 474 aaPredicted RBP9.29□□□□□ -0.92
LINC00353-201ENST00000435401 ATP1B4Q9UN42 357 aaPredicted RBP9.29□□□□□ -0.92
LINC00353-201ENST00000435401 PDXDC2PQ6P474 469 aa9.28□□□□□ -0.92
LINC00353-201ENST00000435401 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.28□□□□□ -0.92
LINC00353-201ENST00000435401 FAM117AQ9C073 453 aa9.28□□□□□ -0.92
LINC00353-201ENST00000435401 H3BM21 787 aa9.27□□□□□ -0.93
LINC00353-201ENST00000435401 UPP2O95045 317 aa9.27□□□□□ -0.93
LINC00353-201ENST00000435401 PPP2R2DQ66LE6 453 aa9.27□□□□□ -0.93
LINC00353-201ENST00000435401 PROCA1Q8NCQ7 364 aaPredicted RBP9.27□□□□□ -0.93
LINC00353-201ENST00000435401 FSHRP23945 695 aa9.26□□□□□ -0.93
LINC00353-201ENST00000435401 LRRN4Q8WUT4 740 aa9.26□□□□□ -0.93
LINC00353-201ENST00000435401 FKBPLQ9UIM3 349 aa9.26□□□□□ -0.93
LINC00353-201ENST00000435401 EMILIN1Q9Y6C2 1016 aa9.26□□□□□ -0.93
LINC00353-201ENST00000435401 VEGFBP49765 207 aa9.25□□□□□ -0.93
LINC00353-201ENST00000435401 ERFEQ4G0M1 354 aa9.25□□□□□ -0.93
LINC00353-201ENST00000435401 C6orf118Q5T5N4 469 aa9.25□□□□□ -0.93
LINC00353-201ENST00000435401 CCDC116Q8IYX3 515 aa9.25□□□□□ -0.93
LINC00353-201ENST00000435401 ARHGAP9Q9BRR9 750 aa9.25□□□□□ -0.93
LINC00353-201ENST00000435401 CARD14Q9BXL6 1004 aa9.25□□□□□ -0.93
LINC00353-201ENST00000435401 BMP2P12643 396 aa9.24□□□□□ -0.93
LINC00353-201ENST00000435401 GMPRP36959 345 aa9.24□□□□□ -0.93
LINC00353-201ENST00000435401 LINC00528Q8N1L1 170 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms