RNA–Protein interactions for RNA: ENST00000434838.6

NBPF3-204, Transcript of NBPF member 3, humanhuman

TSL 5

Gene NBPF3, Length 2,727 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-204ENST00000434838 GLI2P10070 1586 aa11.08□□□□□ -0.64
NBPF3-204ENST00000434838 CFAP74Q9C0B2 1584 aa11.08□□□□□ -0.64
NBPF3-204ENST00000434838 ZFYVE9O95405 1425 aa11.08□□□□□ -0.64
NBPF3-204ENST00000434838 PIK3C2BO00750 1634 aa11.08□□□□□ -0.64
NBPF3-204ENST00000434838 ZKSCAN2Q63HK3 967 aa11.08□□□□□ -0.64
NBPF3-204ENST00000434838 ANTXR1Q9H6X2 564 aa11.08□□□□□ -0.64
NBPF3-204ENST00000434838 UPF2Q9HAU5 1272 aaKnown RBP11.08□□□□□ -0.64
NBPF3-204ENST00000434838 TNNQ9UQP3 1299 aa11.08□□□□□ -0.64
NBPF3-204ENST00000434838 ABCC11Q96J66 1382 aa11.07□□□□□ -0.64
NBPF3-204ENST00000434838 PLEKHF1Q96S99 279 aa11.07□□□□□ -0.64
NBPF3-204ENST00000434838 BRPF3Q9ULD4 1205 aa11.07□□□□□ -0.64
NBPF3-204ENST00000434838 ARHGEF28Q8N1W1 1705 aaKnown RBP11.06□□□□□ -0.64
NBPF3-204ENST00000434838 NEXMIFQ5QGS0 1516 aa11.06□□□□□ -0.64
NBPF3-204ENST00000434838 IL16Q14005 1332 aa11.06□□□□□ -0.64
NBPF3-204ENST00000434838 U2AF1L5P0DN76 240 aaPredicted RBP11.06□□□□□ -0.64
NBPF3-204ENST00000434838 U2AF1Q01081 240 aaKnown RBP eCLIP11.06□□□□□ -0.64
NBPF3-204ENST00000434838 ARHGAP31Q2M1Z3 1444 aa11.06□□□□□ -0.64
NBPF3-204ENST00000434838 HDAC1Q13547 482 aaPredicted RBP11.06□□□□□ -0.64
NBPF3-204ENST00000434838 DZIP1LQ8IYY4 767 aaKnown RBP11.06□□□□□ -0.64
NBPF3-204ENST00000434838 MED14O60244 1454 aa11.05□□□□□ -0.64
NBPF3-204ENST00000434838 CD109Q6YHK3 1445 aa11.05□□□□□ -0.64
NBPF3-204ENST00000434838 GGT6Q6P531 493 aa11.05□□□□□ -0.64
NBPF3-204ENST00000434838 CAMSAP1Q5T5Y3 1602 aa11.05□□□□□ -0.64
NBPF3-204ENST00000434838 COL3A1P02461 1466 aaPredicted RBP11.05□□□□□ -0.64
NBPF3-204ENST00000434838 BCL2L13Q9BXK5 485 aa11.04□□□□□ -0.64
NBPF3-204ENST00000434838 TMPOP42166 694 aaKnown RBP11.03□□□□□ -0.64
NBPF3-204ENST00000434838 TBC1D2Q9BYX2 928 aa11.03□□□□□ -0.64
NBPF3-204ENST00000434838 TRIM35Q9UPQ4 493 aa11.03□□□□□ -0.64
NBPF3-204ENST00000434838 CABP2Q9NPB3 220 aa11.03□□□□□ -0.64
NBPF3-204ENST00000434838 DDX19BQ9UMR2 479 aa11.03□□□□□ -0.64
NBPF3-204ENST00000434838 A0A1W2PP64 1363 aa11.02□□□□□ -0.64
NBPF3-204ENST00000434838 FTSJ3Q8IY81 847 aaKnown RBP11.02□□□□□ -0.64
NBPF3-204ENST00000434838 CFAP44Q96MT7 982 aa11.02□□□□□ -0.64
NBPF3-204ENST00000434838 SIGLEC1Q9BZZ2 1709 aa11.02□□□□□ -0.65
NBPF3-204ENST00000434838 ATAD2Q6PL18 1390 aa11.02□□□□□ -0.65
NBPF3-204ENST00000434838 PNPLA6Q8IY17 1366 aa11.02□□□□□ -0.65
NBPF3-204ENST00000434838 NPM1P06748 294 aaKnown RBP eCLIP11.01□□□□□ -0.65
NBPF3-204ENST00000434838 TRIM27P14373 513 aa11.01□□□□□ -0.65
NBPF3-204ENST00000434838 EXOSC9Q06265 439 aaKnown RBP11.01□□□□□ -0.65
NBPF3-204ENST00000434838 ATF7IPQ6VMQ6 1270 aa11.01□□□□□ -0.65
NBPF3-204ENST00000434838 SMC5Q8IY18 1101 aa11.01□□□□□ -0.65
NBPF3-204ENST00000434838 SLC52A1Q9NWF4 448 aa11.01□□□□□ -0.65
NBPF3-204ENST00000434838 SSH1Q8WYL5 1049 aa11.01□□□□□ -0.65
NBPF3-204ENST00000434838 SMC4Q9NTJ3 1288 aa11.01□□□□□ -0.65
NBPF3-204ENST00000434838 NEO1Q92859 1461 aa11.01□□□□□ -0.65
NBPF3-204ENST00000434838 PNNQ9H307 717 aaKnown RBP11□□□□□ -0.65
NBPF3-204ENST00000434838 FYB1O15117 783 aa11□□□□□ -0.65
NBPF3-204ENST00000434838 GLIPR1L2Q4G1C9 344 aa11□□□□□ -0.65
NBPF3-204ENST00000434838 TSR2Q969E8 191 aaKnown RBP11□□□□□ -0.65
NBPF3-204ENST00000434838 BRPF1P55201 1214 aaPredicted RBP11□□□□□ -0.65
NBPF3-204ENST00000434838 IDI1Q13907 227 aa11□□□□□ -0.65
NBPF3-204ENST00000434838 SLKQ9H2G2 1235 aaPredicted RBP11□□□□□ -0.65
NBPF3-204ENST00000434838 TERF2IPQ9NYB0 399 aa11□□□□□ -0.65
NBPF3-204ENST00000434838 PTPRMP28827 1452 aa10.99□□□□□ -0.65
NBPF3-204ENST00000434838 CD163L1Q9NR16 1453 aa10.99□□□□□ -0.65
NBPF3-204ENST00000434838 ZBTB40Q9NUA8 1239 aa10.99□□□□□ -0.65
NBPF3-204ENST00000434838 POGKQ9P215 609 aa10.99□□□□□ -0.65
NBPF3-204ENST00000434838 ALDH1L2Q3SY69 923 aa10.99□□□□□ -0.65
NBPF3-204ENST00000434838 FAM43AQ8N2R8 423 aa10.99□□□□□ -0.65
NBPF3-204ENST00000434838 ZNF428Q96B54 188 aa10.99□□□□□ -0.65
NBPF3-204ENST00000434838 C22orf23Q9BZE7 217 aa10.99□□□□□ -0.65
NBPF3-204ENST00000434838 CLTCQ00610 1675 aaKnown RBP10.98□□□□□ -0.65
NBPF3-204ENST00000434838 ANKRD26Q9UPS8 1709 aa10.98□□□□□ -0.65
NBPF3-204ENST00000434838 IPO8O15397 1037 aaKnown RBP10.98□□□□□ -0.65
NBPF3-204ENST00000434838 U2SURPO15042 1029 aaKnown RBP10.98□□□□□ -0.65
NBPF3-204ENST00000434838 L1TD1Q5T7N2 865 aaKnown RBP10.98□□□□□ -0.65
NBPF3-204ENST00000434838 CDC42BPGQ6DT37 1551 aa10.98□□□□□ -0.65
NBPF3-204ENST00000434838 CFAP65Q6ZU64 1925 aaKnown RBP10.98□□□□□ -0.65
NBPF3-204ENST00000434838 KIF16BQ96L93 1317 aa10.98□□□□□ -0.65
NBPF3-204ENST00000434838 GGNBP2Q9H3C7 697 aa10.98□□□□□ -0.65
NBPF3-204ENST00000434838 NOB1Q9ULX3 412 aaKnown RBP10.98□□□□□ -0.65
NBPF3-204ENST00000434838 DIP2CQ9Y2E4 1556 aa10.97□□□□□ -0.65
NBPF3-204ENST00000434838 SRPK2P78362 688 aaKnown RBP10.97□□□□□ -0.65
NBPF3-204ENST00000434838 PPIP5K1Q6PFW1 1433 aa10.97□□□□□ -0.65
NBPF3-204ENST00000434838 DIAPH1O60610 1272 aaKnown RBP10.97□□□□□ -0.65
NBPF3-204ENST00000434838 FCHSD2O94868 740 aa10.97□□□□□ -0.65
NBPF3-204ENST00000434838 RIPK4P57078 832 aa10.97□□□□□ -0.65
NBPF3-204ENST00000434838 NUTM2DQ5VT03 806 aaPredicted RBP10.97□□□□□ -0.65
NBPF3-204ENST00000434838 ITPRIPQ8IWB1 547 aa10.97□□□□□ -0.65
NBPF3-204ENST00000434838 NUCB1Q02818 461 aa10.96□□□□□ -0.66
NBPF3-204ENST00000434838 TMEM57Q8N5G2 664 aa10.96□□□□□ -0.66
NBPF3-204ENST00000434838 CHMP5Q9NZZ3 219 aa10.96□□□□□ -0.66
NBPF3-204ENST00000434838 YTHDC2Q9H6S0 1430 aaKnown RBP10.96□□□□□ -0.66
NBPF3-204ENST00000434838 MCM4P33991 863 aa10.95□□□□□ -0.66
NBPF3-204ENST00000434838 RBM25P49756 843 aaKnown RBP10.95□□□□□ -0.66
NBPF3-204ENST00000434838 TMEM131LA2VDJ0 1609 aa10.95□□□□□ -0.66
NBPF3-204ENST00000434838 ARHGEF40Q8TER5 1519 aa10.95□□□□□ -0.66
NBPF3-204ENST00000434838 HDGFL2Q7Z4V5 671 aaPredicted RBP10.94□□□□□ -0.66
NBPF3-204ENST00000434838 NAP1L5Q96NT1 182 aaPredicted RBP10.94□□□□□ -0.66
NBPF3-204ENST00000434838 SAFB2Q14151 953 aaKnown RBP eCLIP10.94□□□□□ -0.66
NBPF3-204ENST00000434838 ARHGAP45Q92619 1136 aa10.94□□□□□ -0.66
NBPF3-204ENST00000434838 SNX21Q969T3 373 aa10.94□□□□□ -0.66
NBPF3-204ENST00000434838 PRAM1Q96QH2 718 aa10.94□□□□□ -0.66
NBPF3-204ENST00000434838 NCOA3Q9Y6Q9 1424 aa10.93□□□□□ -0.66
NBPF3-204ENST00000434838 FSD2A1L4K1 749 aa10.93□□□□□ -0.66
NBPF3-204ENST00000434838 RAPGEF3O95398 923 aa10.93□□□□□ -0.66
NBPF3-204ENST00000434838 CNKSR2Q8WXI2 1034 aa10.93□□□□□ -0.66
NBPF3-204ENST00000434838 STK26Q9P289 416 aa10.93□□□□□ -0.66
NBPF3-204ENST00000434838 PIK3R4Q99570 1358 aa10.93□□□□□ -0.66
NBPF3-204ENST00000434838 DDIT3P35638 169 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms