RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 TULP4Q9NRJ4 1543 aa24.64■■□□□ 1.54
FAM3A-212ENST00000434658 PPP2R1AP30153 589 aa24.64■■□□□ 1.54
FAM3A-212ENST00000434658 USP32Q8NFA0 1604 aa24.64■■□□□ 1.53
FAM3A-212ENST00000434658 NUDT16Q96DE0 195 aaKnown RBP24.63■■□□□ 1.53
FAM3A-212ENST00000434658 PHF8Q9UPP1 1060 aa24.63■■□□□ 1.53
FAM3A-212ENST00000434658 FOXO3O43524 673 aa24.63■■□□□ 1.53
FAM3A-212ENST00000434658 SRPK2P78362 688 aaKnown RBP24.63■■□□□ 1.53
FAM3A-212ENST00000434658 NHSL1Q5SYE7 1610 aa24.62■■□□□ 1.53
FAM3A-212ENST00000434658 EVC2Q86UK5 1308 aa24.61■■□□□ 1.53
FAM3A-212ENST00000434658 PMFBP1Q8TBY8 1022 aa24.61■■□□□ 1.53
FAM3A-212ENST00000434658 CABP2Q9NPB3 220 aa24.61■■□□□ 1.53
FAM3A-212ENST00000434658 COL16A1Q07092 1604 aaPredicted RBP24.6■■□□□ 1.53
FAM3A-212ENST00000434658 NPHP3Q7Z494 1330 aa24.6■■□□□ 1.53
FAM3A-212ENST00000434658 RRP1P56182 461 aaKnown RBP24.59■■□□□ 1.53
FAM3A-212ENST00000434658 RCAN3Q9UKA8 241 aa24.59■■□□□ 1.53
FAM3A-212ENST00000434658 KIF1AQ12756 1690 aa24.58■■□□□ 1.53
FAM3A-212ENST00000434658 ATP7BP35670 1465 aa24.58■■□□□ 1.53
FAM3A-212ENST00000434658 SOS2Q07890 1332 aaPredicted RBP24.57■■□□□ 1.52
FAM3A-212ENST00000434658 XPCQ01831 940 aaPredicted RBP24.57■■□□□ 1.52
FAM3A-212ENST00000434658 CCDC61Q9Y6R9 512 aa24.57■■□□□ 1.52
FAM3A-212ENST00000434658 LRRC59Q96AG4 307 aaKnown RBP24.56■■□□□ 1.52
FAM3A-212ENST00000434658 SALL2Q9Y467 1007 aaPredicted RBP24.56■■□□□ 1.52
FAM3A-212ENST00000434658 ADAMTS8Q9UP79 889 aa24.55■■□□□ 1.52
FAM3A-212ENST00000434658 JCADQ9P266 1359 aa24.55■■□□□ 1.52
FAM3A-212ENST00000434658 KRT28Q7Z3Y7 464 aa24.54■■□□□ 1.52
FAM3A-212ENST00000434658 CCDC136Q96JN2 1154 aa24.54■■□□□ 1.52
FAM3A-212ENST00000434658 FANCIQ9NVI1 1328 aa24.54■■□□□ 1.52
FAM3A-212ENST00000434658 PSME1Q06323 249 aa24.54■■□□□ 1.52
FAM3A-212ENST00000434658 NGDNQ8NEJ9 315 aaKnown RBP24.53■■□□□ 1.52
FAM3A-212ENST00000434658 ITSN1Q15811 1721 aa24.52■■□□□ 1.52
FAM3A-212ENST00000434658 WDR43Q15061 677 aaKnown RBP eCLIP24.52■■□□□ 1.52
FAM3A-212ENST00000434658 CDCA7LQ96GN5 454 aa24.52■■□□□ 1.52
FAM3A-212ENST00000434658 PXDNQ92626 1479 aa24.52■■□□□ 1.52
FAM3A-212ENST00000434658 PLEKHG3A1L390 1219 aa24.5■■□□□ 1.51
FAM3A-212ENST00000434658 PPIP5K1Q6PFW1 1433 aa24.49■■□□□ 1.51
FAM3A-212ENST00000434658 TOPAZ1Q8N9V7 1692 aa24.49■■□□□ 1.51
FAM3A-212ENST00000434658 CABP1Q9NZU7 370 aa24.49■■□□□ 1.51
FAM3A-212ENST00000434658 ACEP12821 1306 aa24.48■■□□□ 1.51
FAM3A-212ENST00000434658 CARD14Q9BXL6 1004 aa24.47■■□□□ 1.51
FAM3A-212ENST00000434658 ANP32EQ9BTT0 268 aa24.46■■□□□ 1.51
FAM3A-212ENST00000434658 ATAD2Q6PL18 1390 aa24.46■■□□□ 1.51
FAM3A-212ENST00000434658 SHPRHQ149N8 1683 aa24.45■■□□□ 1.5
FAM3A-212ENST00000434658 PNPLA6Q8IY17 1366 aa24.45■■□□□ 1.5
FAM3A-212ENST00000434658 SPATA31A3Q5VYP0 1347 aa24.44■■□□□ 1.5
FAM3A-212ENST00000434658 ZNF521Q96K83 1311 aa24.44■■□□□ 1.5
FAM3A-212ENST00000434658 POLR3AO14802 1390 aaPredicted RBP24.44■■□□□ 1.5
FAM3A-212ENST00000434658 SPATA31A6Q5VVP1 1343 aa24.44■■□□□ 1.5
FAM3A-212ENST00000434658 PUS7Q96PZ0 661 aaKnown RBP24.43■■□□□ 1.5
FAM3A-212ENST00000434658 SBNO1A3KN83 1393 aa24.42■■□□□ 1.5
FAM3A-212ENST00000434658 NUTM2BA6NNL0 878 aaPredicted RBP24.41■■□□□ 1.5
FAM3A-212ENST00000434658 NUTM2EB1AL46 878 aaPredicted RBP24.41■■□□□ 1.5
FAM3A-212ENST00000434658 LMOD2Q6P5Q4 547 aa24.41■■□□□ 1.5
FAM3A-212ENST00000434658 NUTM2AQ8IVF1 878 aaPredicted RBP24.41■■□□□ 1.5
FAM3A-212ENST00000434658 EXOC6Q8TAG9 804 aa24.41■■□□□ 1.5
FAM3A-212ENST00000434658 PAK3O75914 559 aaPredicted RBP24.4■■□□□ 1.5
FAM3A-212ENST00000434658 TNS3Q68CZ2 1445 aa24.39■■□□□ 1.5
FAM3A-212ENST00000434658 MED1Q15648 1581 aaPredicted RBP24.39■■□□□ 1.49
FAM3A-212ENST00000434658 NSD3Q9BZ95 1437 aa24.38■■□□□ 1.49
FAM3A-212ENST00000434658 TRPM3Q9HCF6 1732 aaPredicted RBP24.37■■□□□ 1.49
FAM3A-212ENST00000434658 SLC12A5Q9H2X9 1139 aa24.37■■□□□ 1.49
FAM3A-212ENST00000434658 DUSP27Q5VZP5 1158 aa24.35■■□□□ 1.49
FAM3A-212ENST00000434658 ZNF692Q9BU19 519 aaPredicted RBP24.35■■□□□ 1.49
FAM3A-212ENST00000434658 ARHGEF10O15013 1369 aa24.35■■□□□ 1.49
FAM3A-212ENST00000434658 LRP6O75581 1613 aa24.34■■□□□ 1.49
FAM3A-212ENST00000434658 COL22A1Q8NFW1 1626 aaPredicted RBP24.34■■□□□ 1.49
FAM3A-212ENST00000434658 MSH5O43196 834 aa24.34■■□□□ 1.49
FAM3A-212ENST00000434658 PLEKHG5O94827 1062 aa24.34■■□□□ 1.49
FAM3A-212ENST00000434658 GOLGA2Q08379 1002 aa24.34■■□□□ 1.49
FAM3A-212ENST00000434658 MEX3CQ5U5Q3 659 aaKnown RBP24.33■■□□□ 1.48
FAM3A-212ENST00000434658 USP6P35125 1406 aa24.32■■□□□ 1.48
FAM3A-212ENST00000434658 NGEFQ8N5V2 710 aa24.32■■□□□ 1.48
FAM3A-212ENST00000434658 CPSF1Q10570 1443 aaKnown RBP24.32■■□□□ 1.48
FAM3A-212ENST00000434658 NINLQ9Y2I6 1382 aa24.31■■□□□ 1.48
FAM3A-212ENST00000434658 ALS2Q96Q42 1657 aa24.31■■□□□ 1.48
FAM3A-212ENST00000434658 CABLES1Q8TDN4 633 aa24.31■■□□□ 1.48
FAM3A-212ENST00000434658 ADAMTS2O95450 1211 aa24.3■■□□□ 1.48
FAM3A-212ENST00000434658 HDGFL2Q7Z4V5 671 aaPredicted RBP24.3■■□□□ 1.48
FAM3A-212ENST00000434658 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
FAM3A-212ENST00000434658 TERF2IPQ9NYB0 399 aa24.3■■□□□ 1.48
FAM3A-212ENST00000434658 SLFN5Q08AF3 891 aa24.29■■□□□ 1.48
FAM3A-212ENST00000434658 TRMT2AQ8IZ69 625 aaKnown RBP24.29■■□□□ 1.48
FAM3A-212ENST00000434658 ABTB2Q8N961 1025 aa24.29■■□□□ 1.48
FAM3A-212ENST00000434658 CD163L1Q9NR16 1453 aa24.29■■□□□ 1.48
FAM3A-212ENST00000434658 NUTM2GQ5VZR2 741 aa24.28■■□□□ 1.48
FAM3A-212ENST00000434658 CCDC146Q8IYE0 955 aa24.28■■□□□ 1.48
FAM3A-212ENST00000434658 AKAP12Q02952 1782 aa24.28■■□□□ 1.48
FAM3A-212ENST00000434658 ANKRD36BQ8N2N9 1353 aa24.28■■□□□ 1.48
FAM3A-212ENST00000434658 PLIN1O60240 522 aa24.28■■□□□ 1.48
FAM3A-212ENST00000434658 HAP1P54257 671 aaPredicted RBP24.28■■□□□ 1.48
FAM3A-212ENST00000434658 MORC1Q86VD1 984 aa24.27■■□□□ 1.48
FAM3A-212ENST00000434658 SSH2Q76I76 1423 aa24.27■■□□□ 1.48
FAM3A-212ENST00000434658 APAF1O14727 1248 aa24.26■■□□□ 1.47
FAM3A-212ENST00000434658 NSD2O96028 1365 aa24.26■■□□□ 1.47
FAM3A-212ENST00000434658 CGNL1Q0VF96 1302 aa24.26■■□□□ 1.47
FAM3A-212ENST00000434658 TTC21BQ7Z4L5 1316 aa24.26■■□□□ 1.47
FAM3A-212ENST00000434658 A0A1W2PP64 1363 aa24.25■■□□□ 1.47
FAM3A-212ENST00000434658 CRBNQ96SW2 442 aa24.25■■□□□ 1.47
FAM3A-212ENST00000434658 C8orf37Q96NL8 207 aa24.24■■□□□ 1.47
FAM3A-212ENST00000434658 MON2Q7Z3U7 1717 aa24.23■■□□□ 1.47
FAM3A-212ENST00000434658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms