RNA–Protein interactions for RNA: ENST00000433642.2

BLOC1S3-201, Transcript of biogenesis of lysosomal organelles complex 1 subunit 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene BLOC1S3, Length 2,601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3-201ENST00000433642 TRIM35Q9UPQ4 493 aa24.06■■□□□ 1.44
BLOC1S3-201ENST00000433642 MVPQ14764 893 aaKnown RBP24.06■■□□□ 1.44
BLOC1S3-201ENST00000433642 TMPOP42166 694 aaKnown RBP24.05■■□□□ 1.44
BLOC1S3-201ENST00000433642 PREX1Q8TCU6 1659 aa24.04■■□□□ 1.44
BLOC1S3-201ENST00000433642 EXOSC9Q06265 439 aaKnown RBP24.04■■□□□ 1.44
BLOC1S3-201ENST00000433642 ZKSCAN2Q63HK3 967 aa24.04■■□□□ 1.44
BLOC1S3-201ENST00000433642 FRAT2O75474 233 aaPredicted RBP24.03■■□□□ 1.44
BLOC1S3-201ENST00000433642 GSE1Q14687 1217 aa24.03■■□□□ 1.44
BLOC1S3-201ENST00000433642 YTHDC2Q9H6S0 1430 aaKnown RBP24.02■■□□□ 1.44
BLOC1S3-201ENST00000433642 ATAD2Q6PL18 1390 aa24.02■■□□□ 1.44
BLOC1S3-201ENST00000433642 RWDD1Q9H446 243 aaPredicted RBP24.02■■□□□ 1.44
BLOC1S3-201ENST00000433642 DZIP1LQ8IYY4 767 aaKnown RBP24.01■■□□□ 1.43
BLOC1S3-201ENST00000433642 FBXO31Q5XUX0 539 aaPredicted RBP24.01■■□□□ 1.43
BLOC1S3-201ENST00000433642 TERF2IPQ9NYB0 399 aa24.01■■□□□ 1.43
BLOC1S3-201ENST00000433642 POGKQ9P215 609 aa24■■□□□ 1.43
BLOC1S3-201ENST00000433642 ANKRD26Q9UPS8 1709 aa24■■□□□ 1.43
BLOC1S3-201ENST00000433642 FTSJ3Q8IY81 847 aaKnown RBP24■■□□□ 1.43
BLOC1S3-201ENST00000433642 SMC4Q9NTJ3 1288 aa24■■□□□ 1.43
BLOC1S3-201ENST00000433642 CLTCQ00610 1675 aaKnown RBP24■■□□□ 1.43
BLOC1S3-201ENST00000433642 CT47B1P0C2W7 299 aaPredicted RBP23.99■■□□□ 1.43
BLOC1S3-201ENST00000433642 SSH1Q8WYL5 1049 aa23.99■■□□□ 1.43
BLOC1S3-201ENST00000433642 TRIM27P14373 513 aa23.98■■□□□ 1.43
BLOC1S3-201ENST00000433642 MED14O60244 1454 aa23.98■■□□□ 1.43
BLOC1S3-201ENST00000433642 ZMYM3Q14202 1370 aa23.97■■□□□ 1.43
BLOC1S3-201ENST00000433642 CDK19Q9BWU1 502 aa23.96■■□□□ 1.43
BLOC1S3-201ENST00000433642 ALKQ9UM73 1620 aa23.95■■□□□ 1.42
BLOC1S3-201ENST00000433642 RIPK4P57078 832 aa23.95■■□□□ 1.42
BLOC1S3-201ENST00000433642 CABP1Q9NZU7 370 aa23.95■■□□□ 1.42
BLOC1S3-201ENST00000433642 ARHGEF40Q8TER5 1519 aa23.94■■□□□ 1.42
BLOC1S3-201ENST00000433642 PNPLA6Q8IY17 1366 aa23.94■■□□□ 1.42
BLOC1S3-201ENST00000433642 DIAPH1O60610 1272 aaKnown RBP23.94■■□□□ 1.42
BLOC1S3-201ENST00000433642 TBC1D32Q96NH3 1257 aa23.94■■□□□ 1.42
BLOC1S3-201ENST00000433642 IL16Q14005 1332 aa23.93■■□□□ 1.42
BLOC1S3-201ENST00000433642 ATF7IPQ6VMQ6 1270 aa23.93■■□□□ 1.42
BLOC1S3-201ENST00000433642 NOB1Q9ULX3 412 aaKnown RBP23.93■■□□□ 1.42
BLOC1S3-201ENST00000433642 HDGFL2Q7Z4V5 671 aaPredicted RBP23.92■■□□□ 1.42
BLOC1S3-201ENST00000433642 FBLN1P23142 703 aa23.92■■□□□ 1.42
BLOC1S3-201ENST00000433642 ITPRIPQ8IWB1 547 aa23.91■■□□□ 1.42
BLOC1S3-201ENST00000433642 BECN1Q14457 450 aa23.91■■□□□ 1.42
BLOC1S3-201ENST00000433642 KIF20BQ96Q89 1820 aa23.89■■□□□ 1.42
BLOC1S3-201ENST00000433642 HDAC1Q13547 482 aaPredicted RBP23.89■■□□□ 1.41
BLOC1S3-201ENST00000433642 SLKQ9H2G2 1235 aaPredicted RBP23.89■■□□□ 1.41
BLOC1S3-201ENST00000433642 DDX19BQ9UMR2 479 aa23.89■■□□□ 1.41
BLOC1S3-201ENST00000433642 TMEM57Q8N5G2 664 aa23.88■■□□□ 1.41
BLOC1S3-201ENST00000433642 UPF2Q9HAU5 1272 aaKnown RBP23.88■■□□□ 1.41
BLOC1S3-201ENST00000433642 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.87■■□□□ 1.41
BLOC1S3-201ENST00000433642 LRRC7Q96NW7 1537 aa23.87■■□□□ 1.41
BLOC1S3-201ENST00000433642 WAPLQ7Z5K2 1190 aa23.87■■□□□ 1.41
BLOC1S3-201ENST00000433642 RSPH6AQ9H0K4 717 aa23.87■■□□□ 1.41
BLOC1S3-201ENST00000433642 ANTXR1Q9H6X2 564 aa23.85■■□□□ 1.41
BLOC1S3-201ENST00000433642 POLKQ9UBT6 870 aa23.85■■□□□ 1.41
BLOC1S3-201ENST00000433642 STAG3Q9UJ98 1225 aa23.85■■□□□ 1.41
BLOC1S3-201ENST00000433642 TBC1D2Q9BYX2 928 aa23.85■■□□□ 1.41
BLOC1S3-201ENST00000433642 FCHSD2O94868 740 aa23.84■■□□□ 1.41
BLOC1S3-201ENST00000433642 ZBTB40Q9NUA8 1239 aa23.84■■□□□ 1.41
BLOC1S3-201ENST00000433642 CDC42BPGQ6DT37 1551 aa23.84■■□□□ 1.41
BLOC1S3-201ENST00000433642 PRKAR2BP31323 418 aa23.84■■□□□ 1.41
BLOC1S3-201ENST00000433642 SMC5Q8IY18 1101 aa23.83■■□□□ 1.41
BLOC1S3-201ENST00000433642 PNNQ9H307 717 aaKnown RBP23.83■■□□□ 1.41
BLOC1S3-201ENST00000433642 FAM135BQ49AJ0 1406 aa23.82■■□□□ 1.4
BLOC1S3-201ENST00000433642 VSIG10Q8N0Z9 540 aa23.81■■□□□ 1.4
BLOC1S3-201ENST00000433642 KIF16BQ96L93 1317 aa23.81■■□□□ 1.4
BLOC1S3-201ENST00000433642 PHACTR3Q96KR7 559 aa23.8■■□□□ 1.4
BLOC1S3-201ENST00000433642 ZMYND15Q9H091 742 aa23.8■■□□□ 1.4
BLOC1S3-201ENST00000433642 ALDH1L2Q3SY69 923 aa23.79■■□□□ 1.4
BLOC1S3-201ENST00000433642 IPO8O15397 1037 aaKnown RBP23.79■■□□□ 1.4
BLOC1S3-201ENST00000433642 HMOX1P09601 288 aa23.79■■□□□ 1.4
BLOC1S3-201ENST00000433642 THUMPD2Q9BTF0 503 aaKnown RBP23.79■■□□□ 1.4
BLOC1S3-201ENST00000433642 A2ML1A8K2U0 1454 aa23.78■■□□□ 1.4
BLOC1S3-201ENST00000433642 MAP2P11137 1827 aaKnown RBP23.78■■□□□ 1.4
BLOC1S3-201ENST00000433642 ATP7BP35670 1465 aa23.78■■□□□ 1.4
BLOC1S3-201ENST00000433642 DLC1Q96QB1 1528 aa23.78■■□□□ 1.4
BLOC1S3-201ENST00000433642 MFAP1P55081 439 aaKnown RBP23.78■■□□□ 1.4
BLOC1S3-201ENST00000433642 SETD1AO15047 1707 aaKnown RBP23.77■■□□□ 1.4
BLOC1S3-201ENST00000433642 EMILIN1Q9Y6C2 1016 aa23.77■■□□□ 1.4
BLOC1S3-201ENST00000433642 C22orf23Q9BZE7 217 aa23.76■■□□□ 1.39
BLOC1S3-201ENST00000433642 RIMBP3CA6NJZ7 1639 aa23.76■■□□□ 1.39
BLOC1S3-201ENST00000433642 RIMBP3BA6NNM3 1639 aa23.76■■□□□ 1.39
BLOC1S3-201ENST00000433642 RIMBP3Q9UFD9 1639 aa23.76■■□□□ 1.39
BLOC1S3-201ENST00000433642 RIMS2Q9UQ26 1411 aa23.75■■□□□ 1.39
BLOC1S3-201ENST00000433642 NFE2L2Q16236 605 aa23.75■■□□□ 1.39
BLOC1S3-201ENST00000433642 CYB5RLQ6IPT4 315 aa23.75■■□□□ 1.39
BLOC1S3-201ENST00000433642 ZRANB1Q9UGI0 708 aa23.74■■□□□ 1.39
BLOC1S3-201ENST00000433642 PPIP5K1Q6PFW1 1433 aa23.74■■□□□ 1.39
BLOC1S3-201ENST00000433642 NME9Q86XW9 330 aa23.73■■□□□ 1.39
BLOC1S3-201ENST00000433642 FAM43AQ8N2R8 423 aa23.73■■□□□ 1.39
BLOC1S3-201ENST00000433642 SPRYD3Q8NCJ5 442 aa23.73■■□□□ 1.39
BLOC1S3-201ENST00000433642 NUCB1Q02818 461 aa23.73■■□□□ 1.39
BLOC1S3-201ENST00000433642 TSPYL6Q8N831 410 aa23.73■■□□□ 1.39
BLOC1S3-201ENST00000433642 VAMP4O75379 141 aa23.72■■□□□ 1.39
BLOC1S3-201ENST00000433642 PLEKHG5O94827 1062 aa23.72■■□□□ 1.39
BLOC1S3-201ENST00000433642 BRPF1P55201 1214 aaPredicted RBP23.72■■□□□ 1.39
BLOC1S3-201ENST00000433642 FAM69CQ0P6D2 419 aa23.72■■□□□ 1.39
BLOC1S3-201ENST00000433642 CPSF1Q10570 1443 aaKnown RBP23.72■■□□□ 1.39
BLOC1S3-201ENST00000433642 IL13P35225 146 aa23.72■■□□□ 1.39
BLOC1S3-201ENST00000433642 LNPKQ9C0E8 428 aa23.71■■□□□ 1.39
BLOC1S3-201ENST00000433642 SPATA31D1Q6ZQQ2 1576 aa23.71■■□□□ 1.39
BLOC1S3-201ENST00000433642 MRPL50Q8N5N7 158 aaKnown RBP23.7■■□□□ 1.38
BLOC1S3-201ENST00000433642 WASLO00401 505 aaPredicted RBP23.69■■□□□ 1.38
BLOC1S3-201ENST00000433642 ZNF428Q96B54 188 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms