RNA–Protein interactions for RNA: ENST00000433332.7

SRGAP3-203, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 2,222 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-203ENST00000433332 STK26Q9P289 416 aa11.25□□□□□ -0.61
SRGAP3-203ENST00000433332 PPM1GO15355 546 aaPredicted RBP11.24□□□□□ -0.61
SRGAP3-203ENST00000433332 ECM2O94769 699 aaPredicted RBP11.24□□□□□ -0.61
SRGAP3-203ENST00000433332 TMED8Q6PL24 325 aaPredicted RBP11.24□□□□□ -0.61
SRGAP3-203ENST00000433332 TMC1Q8TDI8 760 aa11.24□□□□□ -0.61
SRGAP3-203ENST00000433332 ADAMTSL3P82987 1691 aa11.24□□□□□ -0.61
SRGAP3-203ENST00000433332 ARHGAP23Q9P227 1491 aa11.24□□□□□ -0.61
SRGAP3-203ENST00000433332 NINLQ9Y2I6 1382 aa11.24□□□□□ -0.61
SRGAP3-203ENST00000433332 LMOD2Q6P5Q4 547 aa11.24□□□□□ -0.61
SRGAP3-203ENST00000433332 FAM9BQ8IZU0 186 aa11.24□□□□□ -0.61
SRGAP3-203ENST00000433332 ABCC11Q96J66 1382 aa11.23□□□□□ -0.61
SRGAP3-203ENST00000433332 PLEKHG1Q9ULL1 1385 aa11.23□□□□□ -0.61
SRGAP3-203ENST00000433332 CEBPAP49715 358 aaPredicted RBP11.23□□□□□ -0.61
SRGAP3-203ENST00000433332 CC2D1BQ5T0F9 858 aaKnown RBP11.23□□□□□ -0.61
SRGAP3-203ENST00000433332 CPS1P31327 1500 aa11.23□□□□□ -0.61
SRGAP3-203ENST00000433332 PRAM1Q96QH2 718 aa11.23□□□□□ -0.61
SRGAP3-203ENST00000433332 TECPR2O15040 1411 aa11.22□□□□□ -0.61
SRGAP3-203ENST00000433332 AEBP1Q8IUX7 1158 aa11.22□□□□□ -0.61
SRGAP3-203ENST00000433332 TRAIPQ9BWF2 469 aa11.22□□□□□ -0.61
SRGAP3-203ENST00000433332 POGKQ9P215 609 aa11.22□□□□□ -0.61
SRGAP3-203ENST00000433332 ZNF142P52746 1687 aaPredicted RBP11.21□□□□□ -0.61
SRGAP3-203ENST00000433332 NCLP19338 710 aaKnown RBP11.21□□□□□ -0.61
SRGAP3-203ENST00000433332 CEP170BQ9Y4F5 1589 aaPredicted RBP11.21□□□□□ -0.61
SRGAP3-203ENST00000433332 IL27Q8NEV9 243 aa11.21□□□□□ -0.62
SRGAP3-203ENST00000433332 PNISRQ8TF01 805 aaKnown RBP11.21□□□□□ -0.62
SRGAP3-203ENST00000433332 DIP2AQ14689 1571 aa11.21□□□□□ -0.62
SRGAP3-203ENST00000433332 METP08581 1390 aa11.21□□□□□ -0.62
SRGAP3-203ENST00000433332 ATAD2Q6PL18 1390 aa11.21□□□□□ -0.62
SRGAP3-203ENST00000433332 FAM135BQ49AJ0 1406 aa11.2□□□□□ -0.62
SRGAP3-203ENST00000433332 ADAMTS13Q76LX8 1427 aa11.2□□□□□ -0.62
SRGAP3-203ENST00000433332 ZBED9Q6R2W3 1325 aa11.2□□□□□ -0.62
SRGAP3-203ENST00000433332 NSD3Q9BZ95 1437 aa11.2□□□□□ -0.62
SRGAP3-203ENST00000433332 SUPT16HQ9Y5B9 1047 aaKnown RBP11.2□□□□□ -0.62
SRGAP3-203ENST00000433332 ANKRD36BQ8N2N9 1353 aa11.2□□□□□ -0.62
SRGAP3-203ENST00000433332 SAFB2Q14151 953 aaKnown RBP eCLIP11.19□□□□□ -0.62
SRGAP3-203ENST00000433332 EID1Q9Y6B2 187 aa11.19□□□□□ -0.62
SRGAP3-203ENST00000433332 INSRP06213 1382 aa11.19□□□□□ -0.62
SRGAP3-203ENST00000433332 MED14O60244 1454 aa11.19□□□□□ -0.62
SRGAP3-203ENST00000433332 CARD14Q9BXL6 1004 aa11.19□□□□□ -0.62
SRGAP3-203ENST00000433332 CHMP4BQ9H444 224 aaKnown RBP11.19□□□□□ -0.62
SRGAP3-203ENST00000433332 MINK1Q8N4C8 1332 aaPredicted RBP11.18□□□□□ -0.62
SRGAP3-203ENST00000433332 THEMISQ8N1K5 641 aaPredicted RBP11.18□□□□□ -0.62
SRGAP3-203ENST00000433332 SIRT1Q96EB6 747 aa11.18□□□□□ -0.62
SRGAP3-203ENST00000433332 SRPK2P78362 688 aaKnown RBP11.17□□□□□ -0.62
SRGAP3-203ENST00000433332 NSD2O96028 1365 aa11.17□□□□□ -0.62
SRGAP3-203ENST00000433332 LTKP29376 864 aa11.17□□□□□ -0.62
SRGAP3-203ENST00000433332 TXNDC2Q86VQ3 553 aa11.17□□□□□ -0.62
SRGAP3-203ENST00000433332 SLC12A5Q9H2X9 1139 aa11.17□□□□□ -0.62
SRGAP3-203ENST00000433332 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
SRGAP3-203ENST00000433332 ADGRB2O60241 1585 aa11.17□□□□□ -0.62
SRGAP3-203ENST00000433332 PLEKHH1Q9ULM0 1364 aa11.16□□□□□ -0.62
SRGAP3-203ENST00000433332 PPP2R1AP30153 589 aa11.16□□□□□ -0.62
SRGAP3-203ENST00000433332 FTSJ3Q8IY81 847 aaKnown RBP11.16□□□□□ -0.62
SRGAP3-203ENST00000433332 RGL2O15211 777 aa11.16□□□□□ -0.62
SRGAP3-203ENST00000433332 MSH5O43196 834 aa11.16□□□□□ -0.62
SRGAP3-203ENST00000433332 SECISBP2LQ93073 1101 aaKnown RBP11.16□□□□□ -0.62
SRGAP3-203ENST00000433332 PRDM16Q9HAZ2 1276 aa11.16□□□□□ -0.62
SRGAP3-203ENST00000433332 RBM19Q9Y4C8 960 aaKnown RBP11.16□□□□□ -0.62
SRGAP3-203ENST00000433332 CGNL1Q0VF96 1302 aa11.15□□□□□ -0.62
SRGAP3-203ENST00000433332 BLMP54132 1417 aaPredicted RBP11.15□□□□□ -0.63
SRGAP3-203ENST00000433332 CCDC82Q8N4S0 544 aa11.15□□□□□ -0.63
SRGAP3-203ENST00000433332 ATP7BP35670 1465 aa11.15□□□□□ -0.63
SRGAP3-203ENST00000433332 FANCIQ9NVI1 1328 aa11.14□□□□□ -0.63
SRGAP3-203ENST00000433332 A0A1W2PP64 1363 aa11.14□□□□□ -0.63
SRGAP3-203ENST00000433332 WAPLQ7Z5K2 1190 aa11.14□□□□□ -0.63
SRGAP3-203ENST00000433332 CDK19Q9BWU1 502 aa11.14□□□□□ -0.63
SRGAP3-203ENST00000433332 CD163L1Q9NR16 1453 aa11.14□□□□□ -0.63
SRGAP3-203ENST00000433332 ANKRD26Q9UPS8 1709 aa11.14□□□□□ -0.63
SRGAP3-203ENST00000433332 CNPY4Q8N129 248 aa11.13□□□□□ -0.63
SRGAP3-203ENST00000433332 TERF2IPQ9NYB0 399 aa11.13□□□□□ -0.63
SRGAP3-203ENST00000433332 PTCH1Q13635 1447 aa11.13□□□□□ -0.63
SRGAP3-203ENST00000433332 PIAS4Q8N2W9 510 aaPredicted RBP11.13□□□□□ -0.63
SRGAP3-203ENST00000433332 ROBO2Q9HCK4 1378 aa11.13□□□□□ -0.63
SRGAP3-203ENST00000433332 XRN1Q8IZH2 1706 aaKnown RBP11.13□□□□□ -0.63
SRGAP3-203ENST00000433332 CCDC27Q2M243 656 aa11.12□□□□□ -0.63
SRGAP3-203ENST00000433332 TBX22Q9Y458 520 aa11.12□□□□□ -0.63
SRGAP3-203ENST00000433332 GZF1Q9H116 711 aaPredicted RBP11.12□□□□□ -0.63
SRGAP3-203ENST00000433332 GTF2E1P29083 439 aaPredicted RBP11.11□□□□□ -0.63
SRGAP3-203ENST00000433332 RNF216Q9NWF9 866 aaPredicted RBP11.11□□□□□ -0.63
SRGAP3-203ENST00000433332 PTPRUQ92729 1446 aa11.11□□□□□ -0.63
SRGAP3-203ENST00000433332 KIF20BQ96Q89 1820 aa11.11□□□□□ -0.63
SRGAP3-203ENST00000433332 WASLO00401 505 aaPredicted RBP11.11□□□□□ -0.63
SRGAP3-203ENST00000433332 HDGFL2Q7Z4V5 671 aaPredicted RBP11.11□□□□□ -0.63
SRGAP3-203ENST00000433332 MORC1Q86VD1 984 aa11.11□□□□□ -0.63
SRGAP3-203ENST00000433332 CCDC125Q86Z20 511 aa11.11□□□□□ -0.63
SRGAP3-203ENST00000433332 PIK3R4Q99570 1358 aa11.11□□□□□ -0.63
SRGAP3-203ENST00000433332 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.1□□□□□ -0.63
SRGAP3-203ENST00000433332 CDC42BPGQ6DT37 1551 aa11.1□□□□□ -0.63
SRGAP3-203ENST00000433332 SETD1BQ9UPS6 1966 aaKnown RBP11.1□□□□□ -0.63
SRGAP3-203ENST00000433332 WDR43Q15061 677 aaKnown RBP eCLIP11.09□□□□□ -0.63
SRGAP3-203ENST00000433332 ZNF526Q8TF50 670 aaPredicted RBP11.09□□□□□ -0.63
SRGAP3-203ENST00000433332 SLC26A8Q96RN1 970 aa11.09□□□□□ -0.63
SRGAP3-203ENST00000433332 SLC24A3Q9HC58 644 aa11.09□□□□□ -0.63
SRGAP3-203ENST00000433332 TOPAZ1Q8N9V7 1692 aa11.09□□□□□ -0.63
SRGAP3-203ENST00000433332 SMG6Q86US8 1419 aaKnown RBP11.09□□□□□ -0.63
SRGAP3-203ENST00000433332 POLR3AO14802 1390 aaPredicted RBP11.09□□□□□ -0.63
SRGAP3-203ENST00000433332 ITSN1Q15811 1721 aa11.09□□□□□ -0.63
SRGAP3-203ENST00000433332 PPIP5K1Q6PFW1 1433 aa11.08□□□□□ -0.63
SRGAP3-203ENST00000433332 CANXP27824 592 aaKnown RBP11.08□□□□□ -0.64
SRGAP3-203ENST00000433332 MON2Q7Z3U7 1717 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms