RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 FYB1O15117 783 aa13.53□□□□□ -0.24
SMPD4-206ENST00000433118 HDGFP51858 240 aaKnown RBP13.53□□□□□ -0.24
SMPD4-206ENST00000433118 HDGFL2Q7Z4V5 671 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-206ENST00000433118 U2AF1L5P0DN76 240 aaPredicted RBP13.52□□□□□ -0.24
SMPD4-206ENST00000433118 U2AF1Q01081 240 aaKnown RBP eCLIP13.52□□□□□ -0.24
SMPD4-206ENST00000433118 RUNDC1Q96C34 613 aa13.52□□□□□ -0.24
SMPD4-206ENST00000433118 TMEM2Q9UHN6 1383 aa13.52□□□□□ -0.25
SMPD4-206ENST00000433118 RTN4Q9NQC3 1192 aaKnown RBP13.52□□□□□ -0.25
SMPD4-206ENST00000433118 TCP11L2Q8N4U5 519 aa13.51□□□□□ -0.25
SMPD4-206ENST00000433118 ZRANB1Q9UGI0 708 aa13.51□□□□□ -0.25
SMPD4-206ENST00000433118 ATAD2Q6PL18 1390 aa13.51□□□□□ -0.25
SMPD4-206ENST00000433118 MAPK8IP3Q9UPT6 1336 aa13.51□□□□□ -0.25
SMPD4-206ENST00000433118 SHPRHQ149N8 1683 aa13.5□□□□□ -0.25
SMPD4-206ENST00000433118 WASLO00401 505 aaPredicted RBP13.5□□□□□ -0.25
SMPD4-206ENST00000433118 CFAP53Q96M91 514 aa13.5□□□□□ -0.25
SMPD4-206ENST00000433118 BCL2L13Q9BXK5 485 aa13.5□□□□□ -0.25
SMPD4-206ENST00000433118 VIRMAQ69YN4 1812 aaKnown RBP13.49□□□□□ -0.25
SMPD4-206ENST00000433118 EID1Q9Y6B2 187 aa13.49□□□□□ -0.25
SMPD4-206ENST00000433118 RARSP54136 660 aaKnown RBP13.49□□□□□ -0.25
SMPD4-206ENST00000433118 ABCC11Q96J66 1382 aa13.48□□□□□ -0.25
SMPD4-206ENST00000433118 FRAT2O75474 233 aaPredicted RBP13.48□□□□□ -0.25
SMPD4-206ENST00000433118 NUDT16Q96DE0 195 aaKnown RBP13.48□□□□□ -0.25
SMPD4-206ENST00000433118 RBM33Q96EV2 1170 aaKnown RBP13.48□□□□□ -0.25
SMPD4-206ENST00000433118 PUS7Q96PZ0 661 aaKnown RBP13.48□□□□□ -0.25
SMPD4-206ENST00000433118 SOX12O15370 315 aa13.47□□□□□ -0.25
SMPD4-206ENST00000433118 NME9Q86XW9 330 aa13.47□□□□□ -0.25
SMPD4-206ENST00000433118 ROBO2Q9HCK4 1378 aa13.47□□□□□ -0.25
SMPD4-206ENST00000433118 PMFBP1Q8TBY8 1022 aa13.47□□□□□ -0.25
SMPD4-206ENST00000433118 SEC24BO95487 1268 aa13.46□□□□□ -0.25
SMPD4-206ENST00000433118 WDR63Q8IWG1 891 aa13.46□□□□□ -0.25
SMPD4-206ENST00000433118 TNNQ9UQP3 1299 aa13.46□□□□□ -0.25
SMPD4-206ENST00000433118 CD163L1Q9NR16 1453 aa13.46□□□□□ -0.26
SMPD4-206ENST00000433118 RLBP1P12271 317 aa13.46□□□□□ -0.26
SMPD4-206ENST00000433118 IQSEC2Q5JU85 1478 aa13.45□□□□□ -0.26
SMPD4-206ENST00000433118 USP19O94966 1318 aa13.45□□□□□ -0.26
SMPD4-206ENST00000433118 AMOTL2Q9Y2J4 779 aa13.45□□□□□ -0.26
SMPD4-206ENST00000433118 PCDHB15Q9Y5E8 787 aa13.45□□□□□ -0.26
SMPD4-206ENST00000433118 NRXN3Q9Y4C0 1643 aa13.45□□□□□ -0.26
SMPD4-206ENST00000433118 BRPF3Q9ULD4 1205 aa13.44□□□□□ -0.26
SMPD4-206ENST00000433118 BECN1Q14457 450 aa13.44□□□□□ -0.26
SMPD4-206ENST00000433118 PPIP5K1Q6PFW1 1433 aa13.44□□□□□ -0.26
SMPD4-206ENST00000433118 PHF23Q9BUL5 403 aaPredicted RBP13.44□□□□□ -0.26
SMPD4-206ENST00000433118 MYH16Q9H6N6 1097 aa13.44□□□□□ -0.26
SMPD4-206ENST00000433118 CCDC61Q9Y6R9 512 aa13.44□□□□□ -0.26
SMPD4-206ENST00000433118 PRR36Q9H6K5 1346 aa13.43□□□□□ -0.26
SMPD4-206ENST00000433118 AAMPQ13685 434 aa13.43□□□□□ -0.26
SMPD4-206ENST00000433118 UPF2Q9HAU5 1272 aaKnown RBP13.43□□□□□ -0.26
SMPD4-206ENST00000433118 RRS1Q15050 365 aaKnown RBP13.43□□□□□ -0.26
SMPD4-206ENST00000433118 ADAMTS13Q76LX8 1427 aa13.43□□□□□ -0.26
SMPD4-206ENST00000433118 THEMISQ8N1K5 641 aaPredicted RBP13.43□□□□□ -0.26
SMPD4-206ENST00000433118 EMILIN1Q9Y6C2 1016 aa13.43□□□□□ -0.26
SMPD4-206ENST00000433118 UBR1Q8IWV7 1749 aa13.42□□□□□ -0.26
SMPD4-206ENST00000433118 CCDC27Q2M243 656 aa13.42□□□□□ -0.26
SMPD4-206ENST00000433118 SLKQ9H2G2 1235 aaPredicted RBP13.42□□□□□ -0.26
SMPD4-206ENST00000433118 RWDD1Q9H446 243 aaPredicted RBP13.42□□□□□ -0.26
SMPD4-206ENST00000433118 FTSJ3Q8IY81 847 aaKnown RBP13.41□□□□□ -0.26
SMPD4-206ENST00000433118 PDZRN3Q9UPQ7 1066 aa13.41□□□□□ -0.26
SMPD4-206ENST00000433118 USP32Q8NFA0 1604 aa13.41□□□□□ -0.26
SMPD4-206ENST00000433118 HMOX1P09601 288 aa13.41□□□□□ -0.26
SMPD4-206ENST00000433118 NSD2O96028 1365 aa13.41□□□□□ -0.26
SMPD4-206ENST00000433118 SETD1AO15047 1707 aaKnown RBP13.4□□□□□ -0.26
SMPD4-206ENST00000433118 DIAPH1O60610 1272 aaKnown RBP13.39□□□□□ -0.27
SMPD4-206ENST00000433118 POLKQ9UBT6 870 aa13.39□□□□□ -0.27
SMPD4-206ENST00000433118 C3P01024 1663 aa13.39□□□□□ -0.27
SMPD4-206ENST00000433118 PTPRUQ92729 1446 aa13.39□□□□□ -0.27
SMPD4-206ENST00000433118 PLEKHG5O94827 1062 aa13.39□□□□□ -0.27
SMPD4-206ENST00000433118 ZKSCAN2Q63HK3 967 aa13.39□□□□□ -0.27
SMPD4-206ENST00000433118 PLEKHG1Q9ULL1 1385 aa13.39□□□□□ -0.27
SMPD4-206ENST00000433118 MVPQ14764 893 aaKnown RBP13.39□□□□□ -0.27
SMPD4-206ENST00000433118 TSR2Q969E8 191 aaKnown RBP13.39□□□□□ -0.27
SMPD4-206ENST00000433118 NLRP1Q9C000 1473 aa13.38□□□□□ -0.27
SMPD4-206ENST00000433118 KCNA6P17658 529 aa13.38□□□□□ -0.27
SMPD4-206ENST00000433118 FER1L4A9Z1Z3 1794 aa13.38□□□□□ -0.27
SMPD4-206ENST00000433118 DLC1Q96QB1 1528 aa13.38□□□□□ -0.27
SMPD4-206ENST00000433118 DZIP1LQ8IYY4 767 aaKnown RBP13.38□□□□□ -0.27
SMPD4-206ENST00000433118 SMC4Q9NTJ3 1288 aa13.38□□□□□ -0.27
SMPD4-206ENST00000433118 ACEP12821 1306 aa13.37□□□□□ -0.27
SMPD4-206ENST00000433118 COG3Q96JB2 828 aa13.37□□□□□ -0.27
SMPD4-206ENST00000433118 NUTM2GQ5VZR2 741 aa13.36□□□□□ -0.27
SMPD4-206ENST00000433118 TBC1D32Q96NH3 1257 aa13.36□□□□□ -0.27
SMPD4-206ENST00000433118 EXOSC9Q06265 439 aaKnown RBP13.35□□□□□ -0.27
SMPD4-206ENST00000433118 NGDNQ8NEJ9 315 aaKnown RBP13.35□□□□□ -0.27
SMPD4-206ENST00000433118 FAM135BQ49AJ0 1406 aa13.35□□□□□ -0.27
SMPD4-206ENST00000433118 PRKAR2BP31323 418 aa13.34□□□□□ -0.27
SMPD4-206ENST00000433118 ITPRIPQ8IWB1 547 aa13.34□□□□□ -0.27
SMPD4-206ENST00000433118 ADGRB2O60241 1585 aa13.34□□□□□ -0.27
SMPD4-206ENST00000433118 RIPK4P57078 832 aa13.34□□□□□ -0.27
SMPD4-206ENST00000433118 ANO8Q9HCE9 1232 aaPredicted RBP13.34□□□□□ -0.27
SMPD4-206ENST00000433118 TBX22Q9Y458 520 aa13.34□□□□□ -0.27
SMPD4-206ENST00000433118 CT47B1P0C2W7 299 aaPredicted RBP13.34□□□□□ -0.27
SMPD4-206ENST00000433118 TMPOP42166 694 aaKnown RBP13.34□□□□□ -0.27
SMPD4-206ENST00000433118 NCBP3Q53F19 620 aaKnown RBP13.34□□□□□ -0.27
SMPD4-206ENST00000433118 CPS1P31327 1500 aa13.33□□□□□ -0.27
SMPD4-206ENST00000433118 TRIM27P14373 513 aa13.33□□□□□ -0.28
SMPD4-206ENST00000433118 PLEKHF1Q96S99 279 aa13.33□□□□□ -0.28
SMPD4-206ENST00000433118 THUMPD2Q9BTF0 503 aaKnown RBP13.33□□□□□ -0.28
SMPD4-206ENST00000433118 TECPR2O15040 1411 aa13.33□□□□□ -0.28
SMPD4-206ENST00000433118 CPSF1Q10570 1443 aaKnown RBP13.33□□□□□ -0.28
SMPD4-206ENST00000433118 C14orf37Q86TY3 774 aa13.33□□□□□ -0.28
SMPD4-206ENST00000433118 TBC1D2Q9BYX2 928 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms