RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 KANK1Q14678 1352 aa13.24□□□□□ -0.29
CCDC171-202ENST00000432954 JAKMIP3Q5VZ66 844 aa13.23□□□□□ -0.29
CCDC171-202ENST00000432954 KLHL23Q8NBE8 558 aa13.23□□□□□ -0.29
CCDC171-202ENST00000432954 EXOC6Q8TAG9 804 aa13.23□□□□□ -0.29
CCDC171-202ENST00000432954 RIPOR2Q9Y4F9 1068 aa13.23□□□□□ -0.29
CCDC171-202ENST00000432954 TNIKQ9UKE5 1360 aa13.23□□□□□ -0.29
CCDC171-202ENST00000432954 A0A1B0GUL7 405 aa13.22□□□□□ -0.29
CCDC171-202ENST00000432954 ERICH4A6NGS2 130 aa13.22□□□□□ -0.29
CCDC171-202ENST00000432954 MAPKBP1O60336 1514 aa13.22□□□□□ -0.29
CCDC171-202ENST00000432954 CTIFO43310 598 aaKnown RBP13.22□□□□□ -0.29
CCDC171-202ENST00000432954 RRP1P56182 461 aaKnown RBP13.22□□□□□ -0.29
CCDC171-202ENST00000432954 SRPK2P78362 688 aaKnown RBP13.22□□□□□ -0.29
CCDC171-202ENST00000432954 MORC1Q86VD1 984 aa13.22□□□□□ -0.29
CCDC171-202ENST00000432954 KRT222Q8N1A0 295 aa13.22□□□□□ -0.29
CCDC171-202ENST00000432954 TSC1Q92574 1164 aa13.22□□□□□ -0.29
CCDC171-202ENST00000432954 POLKQ9UBT6 870 aa13.22□□□□□ -0.29
CCDC171-202ENST00000432954 GYS2P54840 703 aa13.21□□□□□ -0.29
CCDC171-202ENST00000432954 KIAA2012Q0VF49 1180 aa13.21□□□□□ -0.29
CCDC171-202ENST00000432954 NOLC1Q14978 699 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCDC171-202ENST00000432954 SF3A1Q15459 793 aaKnown RBP13.21□□□□□ -0.29
CCDC171-202ENST00000432954 NME8Q8N427 588 aa13.21□□□□□ -0.29
CCDC171-202ENST00000432954 PROCA1Q8NCQ7 364 aaPredicted RBP13.21□□□□□ -0.29
CCDC171-202ENST00000432954 KIAA1107Q9UPP5 1409 aa13.21□□□□□ -0.29
CCDC171-202ENST00000432954 ABCD1P33897 745 aa13.21□□□□□ -0.3
CCDC171-202ENST00000432954 IRX1P78414 480 aaPredicted RBP13.21□□□□□ -0.3
CCDC171-202ENST00000432954 JARID2Q92833 1246 aaPredicted RBP13.21□□□□□ -0.3
CCDC171-202ENST00000432954 ATG3Q9NT62 314 aa13.21□□□□□ -0.3
CCDC171-202ENST00000432954 CHMP5Q9NZZ3 219 aa13.21□□□□□ -0.3
CCDC171-202ENST00000432954 RSF1Q96T23 1441 aaPredicted RBP13.2□□□□□ -0.3
CCDC171-202ENST00000432954 MYO1CO00159 1063 aa13.2□□□□□ -0.3
CCDC171-202ENST00000432954 FAM53CQ9NYF3 392 aa13.2□□□□□ -0.3
CCDC171-202ENST00000432954 SMARCA4P51532 1647 aa13.2□□□□□ -0.3
CCDC171-202ENST00000432954 USP19O94966 1318 aa13.2□□□□□ -0.3
CCDC171-202ENST00000432954 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
CCDC171-202ENST00000432954 SSFA2P28290 1259 aa13.2□□□□□ -0.3
CCDC171-202ENST00000432954 MAP2K2P36507 400 aa13.2□□□□□ -0.3
CCDC171-202ENST00000432954 HDGFL1Q5TGJ6 251 aa13.2□□□□□ -0.3
CCDC171-202ENST00000432954 CEP89Q96ST8 783 aa13.2□□□□□ -0.3
CCDC171-202ENST00000432954 NPC1L1Q9UHC9 1359 aa13.19□□□□□ -0.3
CCDC171-202ENST00000432954 ANKRD20A12PQ8NF67 263 aa13.18□□□□□ -0.3
CCDC171-202ENST00000432954 TATDN2Q93075 761 aa13.18□□□□□ -0.3
CCDC171-202ENST00000432954 RANBP17Q9H2T7 1088 aaKnown RBP13.18□□□□□ -0.3
CCDC171-202ENST00000432954 ETAA1Q9NY74 926 aa13.18□□□□□ -0.3
CCDC171-202ENST00000432954 FAM163BP0C2L3 166 aa13.18□□□□□ -0.3
CCDC171-202ENST00000432954 MCTP2Q6DN12 878 aa13.18□□□□□ -0.3
CCDC171-202ENST00000432954 ATL2Q8NHH9 583 aa13.18□□□□□ -0.3
CCDC171-202ENST00000432954 ZNF446Q9NWS9 450 aa13.18□□□□□ -0.3
CCDC171-202ENST00000432954 PHF8Q9UPP1 1060 aa13.18□□□□□ -0.3
CCDC171-202ENST00000432954 SART3Q15020 963 aaKnown RBP13.17□□□□□ -0.3
CCDC171-202ENST00000432954 TACO1Q9BSH4 297 aaKnown RBP13.17□□□□□ -0.3
CCDC171-202ENST00000432954 CCDC144AA2RUR9 1427 aa13.17□□□□□ -0.3
CCDC171-202ENST00000432954 CADPS2Q86UW7 1296 aa13.17□□□□□ -0.3
CCDC171-202ENST00000432954 MAF1Q9H063 256 aa13.17□□□□□ -0.3
CCDC171-202ENST00000432954 MYOM3Q5VTT5 1437 aa13.17□□□□□ -0.3
CCDC171-202ENST00000432954 CECR2Q9BXF3 1484 aa13.16□□□□□ -0.3
CCDC171-202ENST00000432954 CAND2O75155 1236 aa13.16□□□□□ -0.3
CCDC171-202ENST00000432954 MAGEA8P43361 318 aa13.16□□□□□ -0.3
CCDC171-202ENST00000432954 TTC31Q49AM3 519 aaPredicted RBP13.16□□□□□ -0.3
CCDC171-202ENST00000432954 EIF3JO75822 258 aaKnown RBP13.15□□□□□ -0.3
CCDC171-202ENST00000432954 SKILP12757 684 aa13.15□□□□□ -0.3
CCDC171-202ENST00000432954 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.3
CCDC171-202ENST00000432954 NFATC2IPQ8NCF5 419 aa13.15□□□□□ -0.3
CCDC171-202ENST00000432954 KDM2BQ8NHM5 1336 aa13.15□□□□□ -0.3
CCDC171-202ENST00000432954 ADCY2Q08462 1091 aa13.15□□□□□ -0.3
CCDC171-202ENST00000432954 C10orf67Q8IYJ2 551 aa13.15□□□□□ -0.3
CCDC171-202ENST00000432954 DIAPH3Q9NSV4 1193 aa13.15□□□□□ -0.3
CCDC171-202ENST00000432954 MROH2BQ7Z745 1585 aa13.15□□□□□ -0.31
CCDC171-202ENST00000432954 CCP110O43303 1012 aa13.14□□□□□ -0.31
CCDC171-202ENST00000432954 ERCC3P19447 782 aa13.14□□□□□ -0.31
CCDC171-202ENST00000432954 CDC37Q16543 378 aaPredicted RBP13.14□□□□□ -0.31
CCDC171-202ENST00000432954 NOM1Q5C9Z4 860 aaKnown RBP13.14□□□□□ -0.31
CCDC171-202ENST00000432954 MTA3Q9BTC8 594 aa13.14□□□□□ -0.31
CCDC171-202ENST00000432954 CEP126Q9P2H0 1117 aa13.14□□□□□ -0.31
CCDC171-202ENST00000432954 NLRP1Q9C000 1473 aa13.14□□□□□ -0.31
CCDC171-202ENST00000432954 RAD21O60216 631 aa13.14□□□□□ -0.31
CCDC171-202ENST00000432954 PPFIA2O75334 1257 aa13.14□□□□□ -0.31
CCDC171-202ENST00000432954 ACRBPQ8NEB7 543 aa13.14□□□□□ -0.31
CCDC171-202ENST00000432954 KIF18AQ8NI77 898 aa13.14□□□□□ -0.31
CCDC171-202ENST00000432954 IRAK4Q9NWZ3 460 aa13.14□□□□□ -0.31
CCDC171-202ENST00000432954 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.14□□□□□ -0.31
CCDC171-202ENST00000432954 IL16Q14005 1332 aa13.13□□□□□ -0.31
CCDC171-202ENST00000432954 SETSIPP0DME0 302 aa13.13□□□□□ -0.31
CCDC171-202ENST00000432954 ZNF280DQ6N043 979 aa13.13□□□□□ -0.31
CCDC171-202ENST00000432954 SYT10Q6XYQ8 523 aa13.13□□□□□ -0.31
CCDC171-202ENST00000432954 TXLNBQ8N3L3 684 aa13.13□□□□□ -0.31
CCDC171-202ENST00000432954 NCOA2Q15596 1464 aa13.13□□□□□ -0.31
CCDC171-202ENST00000432954 TRAF1Q13077 416 aa13.13□□□□□ -0.31
CCDC171-202ENST00000432954 PIBF1Q8WXW3 757 aa13.13□□□□□ -0.31
CCDC171-202ENST00000432954 SPAG9O60271 1321 aaKnown RBP13.12□□□□□ -0.31
CCDC171-202ENST00000432954 FKBP5Q13451 457 aaPredicted RBP13.12□□□□□ -0.31
CCDC171-202ENST00000432954 RABEP1Q15276 862 aa13.12□□□□□ -0.31
CCDC171-202ENST00000432954 AMOTQ4VCS5 1084 aa13.12□□□□□ -0.31
CCDC171-202ENST00000432954 LARP6Q9BRS8 491 aaKnown RBP13.12□□□□□ -0.31
CCDC171-202ENST00000432954 CWC15Q9P013 229 aaKnown RBP13.12□□□□□ -0.31
CCDC171-202ENST00000432954 ZNF232Q9UNY5 417 aa13.12□□□□□ -0.31
CCDC171-202ENST00000432954 TRIM66O15016 1216 aa13.11□□□□□ -0.31
CCDC171-202ENST00000432954 KINO60870 393 aaKnown RBP13.11□□□□□ -0.31
CCDC171-202ENST00000432954 ZNF445P59923 1031 aa13.11□□□□□ -0.31
CCDC171-202ENST00000432954 CEP164Q9UPV0 1460 aa13.11□□□□□ -0.31
CCDC171-202ENST00000432954 C21orf2O43822 256 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms