RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 UBR1Q8IWV7 1749 aa10.88□□□□□ -0.67
HDAC9-212ENST00000432645 DLC1Q96QB1 1528 aa10.88□□□□□ -0.67
HDAC9-212ENST00000432645 ROBO2Q9HCK4 1378 aa10.88□□□□□ -0.67
HDAC9-212ENST00000432645 HOMEZQ8IX15 550 aa10.88□□□□□ -0.67
HDAC9-212ENST00000432645 PPIP5K1Q6PFW1 1433 aa10.87□□□□□ -0.67
HDAC9-212ENST00000432645 AAMPQ13685 434 aa10.87□□□□□ -0.67
HDAC9-212ENST00000432645 ZRANB1Q9UGI0 708 aa10.87□□□□□ -0.67
HDAC9-212ENST00000432645 ADAMTS13Q76LX8 1427 aa10.87□□□□□ -0.67
HDAC9-212ENST00000432645 CRBNQ96SW2 442 aa10.87□□□□□ -0.67
HDAC9-212ENST00000432645 SHPRHQ149N8 1683 aa10.87□□□□□ -0.67
HDAC9-212ENST00000432645 E9PSI1 815 aa10.86□□□□□ -0.67
HDAC9-212ENST00000432645 NME9Q86XW9 330 aa10.86□□□□□ -0.67
HDAC9-212ENST00000432645 NLRP1Q9C000 1473 aa10.86□□□□□ -0.67
HDAC9-212ENST00000432645 TRMT2AQ8IZ69 625 aaKnown RBP10.86□□□□□ -0.67
HDAC9-212ENST00000432645 CCDC61Q9Y6R9 512 aa10.86□□□□□ -0.67
HDAC9-212ENST00000432645 BCAR3O75815 825 aa10.85□□□□□ -0.67
HDAC9-212ENST00000432645 THEMISQ8N1K5 641 aaPredicted RBP10.85□□□□□ -0.67
HDAC9-212ENST00000432645 PLEKHG1Q9ULL1 1385 aa10.85□□□□□ -0.67
HDAC9-212ENST00000432645 PRR36Q9H6K5 1346 aa10.84□□□□□ -0.67
HDAC9-212ENST00000432645 AMOTL2Q9Y2J4 779 aa10.84□□□□□ -0.67
HDAC9-212ENST00000432645 C3P01024 1663 aa10.84□□□□□ -0.67
HDAC9-212ENST00000432645 FAM135BQ49AJ0 1406 aa10.84□□□□□ -0.67
HDAC9-212ENST00000432645 DIAPH1O60610 1272 aaKnown RBP10.83□□□□□ -0.68
HDAC9-212ENST00000432645 SIRT1Q96EB6 747 aa10.83□□□□□ -0.68
HDAC9-212ENST00000432645 ZMYND15Q9H091 742 aa10.83□□□□□ -0.68
HDAC9-212ENST00000432645 POLKQ9UBT6 870 aa10.83□□□□□ -0.68
HDAC9-212ENST00000432645 TECPR2O15040 1411 aa10.83□□□□□ -0.68
HDAC9-212ENST00000432645 NKTRP30414 1462 aaKnown RBP10.83□□□□□ -0.68
HDAC9-212ENST00000432645 NGEFQ8N5V2 710 aa10.83□□□□□ -0.68
HDAC9-212ENST00000432645 EMILIN1Q9Y6C2 1016 aa10.83□□□□□ -0.68
HDAC9-212ENST00000432645 ATP7BP35670 1465 aa10.82□□□□□ -0.68
HDAC9-212ENST00000432645 TULP1O00294 542 aaPredicted RBP10.82□□□□□ -0.68
HDAC9-212ENST00000432645 GLIPR1L2Q4G1C9 344 aa10.82□□□□□ -0.68
HDAC9-212ENST00000432645 PTPRUQ92729 1446 aa10.82□□□□□ -0.68
HDAC9-212ENST00000432645 CPSF1Q10570 1443 aaKnown RBP10.82□□□□□ -0.68
HDAC9-212ENST00000432645 RRS1Q15050 365 aaKnown RBP10.82□□□□□ -0.68
HDAC9-212ENST00000432645 FER1L4A9Z1Z3 1794 aa10.82□□□□□ -0.68
HDAC9-212ENST00000432645 MED14O60244 1454 aa10.81□□□□□ -0.68
HDAC9-212ENST00000432645 MAPK8IP3Q9UPT6 1336 aa10.81□□□□□ -0.68
HDAC9-212ENST00000432645 IQSEC2Q5JU85 1478 aa10.81□□□□□ -0.68
HDAC9-212ENST00000432645 A0A0U1RQG5 324 aaPredicted RBP10.81□□□□□ -0.68
HDAC9-212ENST00000432645 PMFBP1Q8TBY8 1022 aa10.81□□□□□ -0.68
HDAC9-212ENST00000432645 COG3Q96JB2 828 aa10.81□□□□□ -0.68
HDAC9-212ENST00000432645 PLEKHF1Q96S99 279 aa10.81□□□□□ -0.68
HDAC9-212ENST00000432645 EDC4Q6P2E9 1401 aaKnown RBP10.8□□□□□ -0.68
HDAC9-212ENST00000432645 CPS1P31327 1500 aa10.8□□□□□ -0.68
HDAC9-212ENST00000432645 SOX12O15370 315 aa10.8□□□□□ -0.68
HDAC9-212ENST00000432645 HMOX1P09601 288 aa10.8□□□□□ -0.68
HDAC9-212ENST00000432645 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.8□□□□□ -0.68
HDAC9-212ENST00000432645 BCL2L13Q9BXK5 485 aa10.8□□□□□ -0.68
HDAC9-212ENST00000432645 TBX22Q9Y458 520 aa10.8□□□□□ -0.68
HDAC9-212ENST00000432645 ACEP12821 1306 aa10.8□□□□□ -0.68
HDAC9-212ENST00000432645 COL3A1P02461 1466 aaPredicted RBP10.8□□□□□ -0.68
HDAC9-212ENST00000432645 TMPOP42166 694 aaKnown RBP10.79□□□□□ -0.68
HDAC9-212ENST00000432645 SKAP1Q86WV1 359 aa10.79□□□□□ -0.68
HDAC9-212ENST00000432645 WDR63Q8IWG1 891 aa10.79□□□□□ -0.68
HDAC9-212ENST00000432645 FRAT1Q92837 279 aaPredicted RBP10.79□□□□□ -0.68
HDAC9-212ENST00000432645 TSR2Q969E8 191 aaKnown RBP10.79□□□□□ -0.68
HDAC9-212ENST00000432645 RBM33Q96EV2 1170 aaKnown RBP10.79□□□□□ -0.68
HDAC9-212ENST00000432645 CANXP27824 592 aaKnown RBP10.78□□□□□ -0.68
HDAC9-212ENST00000432645 PNPLA6Q8IY17 1366 aa10.78□□□□□ -0.68
HDAC9-212ENST00000432645 ZNF692Q9BU19 519 aaPredicted RBP10.78□□□□□ -0.68
HDAC9-212ENST00000432645 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.78□□□□□ -0.68
HDAC9-212ENST00000432645 KCNA6P17658 529 aa10.78□□□□□ -0.68
HDAC9-212ENST00000432645 RIPK4P57078 832 aa10.78□□□□□ -0.68
HDAC9-212ENST00000432645 KNDC1Q76NI1 1749 aa10.78□□□□□ -0.68
HDAC9-212ENST00000432645 ARHGAP23Q9P227 1491 aa10.78□□□□□ -0.68
HDAC9-212ENST00000432645 PRKAR2BP31323 418 aa10.78□□□□□ -0.68
HDAC9-212ENST00000432645 CCDC27Q2M243 656 aa10.78□□□□□ -0.68
HDAC9-212ENST00000432645 SLIT1O75093 1534 aa10.77□□□□□ -0.68
HDAC9-212ENST00000432645 KIF20BQ96Q89 1820 aa10.77□□□□□ -0.68
HDAC9-212ENST00000432645 FANCIQ9NVI1 1328 aa10.77□□□□□ -0.68
HDAC9-212ENST00000432645 RBM10P98175 930 aaKnown RBP10.77□□□□□ -0.68
HDAC9-212ENST00000432645 TRIM35Q9UPQ4 493 aa10.77□□□□□ -0.68
HDAC9-212ENST00000432645 ANKRD26Q9UPS8 1709 aa10.77□□□□□ -0.69
HDAC9-212ENST00000432645 CDC42BPGQ6DT37 1551 aa10.76□□□□□ -0.69
HDAC9-212ENST00000432645 RSPH6AQ9H0K4 717 aa10.76□□□□□ -0.69
HDAC9-212ENST00000432645 TTC21BQ7Z4L5 1316 aa10.76□□□□□ -0.69
HDAC9-212ENST00000432645 PHACTR3Q96KR7 559 aa10.76□□□□□ -0.69
HDAC9-212ENST00000432645 MYH16Q9H6N6 1097 aa10.76□□□□□ -0.69
HDAC9-212ENST00000432645 PANK1Q8TE04 598 aa10.76□□□□□ -0.69
HDAC9-212ENST00000432645 FCHSD2O94868 740 aa10.75□□□□□ -0.69
HDAC9-212ENST00000432645 RARSP54136 660 aaKnown RBP10.75□□□□□ -0.69
HDAC9-212ENST00000432645 NGDNQ8NEJ9 315 aaKnown RBP10.75□□□□□ -0.69
HDAC9-212ENST00000432645 PLEKHG3A1L390 1219 aa10.75□□□□□ -0.69
HDAC9-212ENST00000432645 NEFMP07197 916 aa10.74□□□□□ -0.69
HDAC9-212ENST00000432645 IL13P35225 146 aa10.74□□□□□ -0.69
HDAC9-212ENST00000432645 COG6Q9Y2V7 657 aa10.74□□□□□ -0.69
HDAC9-212ENST00000432645 LAS1LQ9Y4W2 734 aaKnown RBP10.74□□□□□ -0.69
HDAC9-212ENST00000432645 NBR1Q14596 966 aa10.74□□□□□ -0.69
HDAC9-212ENST00000432645 ANKLE2Q86XL3 938 aa10.74□□□□□ -0.69
HDAC9-212ENST00000432645 TNNQ9UQP3 1299 aa10.74□□□□□ -0.69
HDAC9-212ENST00000432645 RIMS1Q86UR5 1692 aaKnown RBP10.74□□□□□ -0.69
HDAC9-212ENST00000432645 PAK3O75914 559 aaPredicted RBP10.73□□□□□ -0.69
HDAC9-212ENST00000432645 EXOSC9Q06265 439 aaKnown RBP10.73□□□□□ -0.69
HDAC9-212ENST00000432645 CLUAP1Q96AJ1 413 aa10.73□□□□□ -0.69
HDAC9-212ENST00000432645 THUMPD2Q9BTF0 503 aaKnown RBP10.73□□□□□ -0.69
HDAC9-212ENST00000432645 PNNQ9H307 717 aaKnown RBP10.73□□□□□ -0.69
HDAC9-212ENST00000432645 MAP2P11137 1827 aaKnown RBP10.73□□□□□ -0.69
HDAC9-212ENST00000432645 CEP170BQ9Y4F5 1589 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms