RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 CCDC9Q9Y3X0 531 aaKnown RBP20.87■□□□□ 0.93
SEC13-212ENST00000432213 BTG4Q9NY30 223 aa20.86■□□□□ 0.93
SEC13-212ENST00000432213 GPRASP1Q5JY77 1395 aa20.85■□□□□ 0.93
SEC13-212ENST00000432213 NRKQ7Z2Y5 1582 aa20.85■□□□□ 0.93
SEC13-212ENST00000432213 QRICH2Q9H0J4 1663 aa20.84■□□□□ 0.93
SEC13-212ENST00000432213 FAM98CQ17RN3 349 aaKnown RBP20.84■□□□□ 0.93
SEC13-212ENST00000432213 CCDC125Q86Z20 511 aa20.84■□□□□ 0.93
SEC13-212ENST00000432213 RGPD1P0DJD0 1748 aa20.84■□□□□ 0.93
SEC13-212ENST00000432213 EIF3AQ14152 1382 aaKnown RBP20.84■□□□□ 0.93
SEC13-212ENST00000432213 NBPF1Q3BBV0 1214 aa20.83■□□□□ 0.93
SEC13-212ENST00000432213 FAM182BQ5T319 152 aa20.83■□□□□ 0.93
SEC13-212ENST00000432213 NUDT16Q96DE0 195 aaKnown RBP20.83■□□□□ 0.93
SEC13-212ENST00000432213 ZRANB1Q9UGI0 708 aa20.83■□□□□ 0.93
SEC13-212ENST00000432213 KRT27Q7Z3Y8 459 aa20.82■□□□□ 0.92
SEC13-212ENST00000432213 LMO7Q8WWI1 1683 aa20.81■□□□□ 0.92
SEC13-212ENST00000432213 PAK3O75914 559 aaPredicted RBP20.81■□□□□ 0.92
SEC13-212ENST00000432213 HRCP23327 699 aa20.81■□□□□ 0.92
SEC13-212ENST00000432213 NUTM2GQ5VZR2 741 aa20.81■□□□□ 0.92
SEC13-212ENST00000432213 NGDNQ8NEJ9 315 aaKnown RBP20.81■□□□□ 0.92
SEC13-212ENST00000432213 CDK19Q9BWU1 502 aa20.8■□□□□ 0.92
SEC13-212ENST00000432213 KIAA0232Q92628 1395 aa20.8■□□□□ 0.92
SEC13-212ENST00000432213 SPATA31A5Q5VU36 1347 aa20.79■□□□□ 0.92
SEC13-212ENST00000432213 SPATA31A7Q8IWB4 1347 aa20.79■□□□□ 0.92
SEC13-212ENST00000432213 CHRNA2Q15822 529 aa20.79■□□□□ 0.92
SEC13-212ENST00000432213 POLR3AO14802 1390 aaPredicted RBP20.79■□□□□ 0.92
SEC13-212ENST00000432213 A0A0G2JS52 829 aa20.77■□□□□ 0.92
SEC13-212ENST00000432213 MYT1Q01538 1121 aa20.77■□□□□ 0.92
SEC13-212ENST00000432213 LRP5O75197 1615 aa20.77■□□□□ 0.92
SEC13-212ENST00000432213 CAMTA1Q9Y6Y1 1673 aa20.76■□□□□ 0.91
SEC13-212ENST00000432213 ACEP12821 1306 aa20.76■□□□□ 0.91
SEC13-212ENST00000432213 PRDM11Q9NQV5 511 aa20.75■□□□□ 0.91
SEC13-212ENST00000432213 TRPM1Q7Z4N2 1603 aa20.75■□□□□ 0.91
SEC13-212ENST00000432213 STAC3Q96MF2 364 aa20.74■□□□□ 0.91
SEC13-212ENST00000432213 ZC3H6P61129 1189 aaKnown RBP20.73■□□□□ 0.91
SEC13-212ENST00000432213 NBPF8Q3BBV2 869 aa20.72■□□□□ 0.91
SEC13-212ENST00000432213 SPATA31A1Q5TZJ5 1347 aa20.72■□□□□ 0.91
SEC13-212ENST00000432213 PIK3C2AO00443 1686 aa20.71■□□□□ 0.91
SEC13-212ENST00000432213 PSDA5PKW4 1024 aaPredicted RBP20.71■□□□□ 0.91
SEC13-212ENST00000432213 PPIP5K1Q6PFW1 1433 aa20.7■□□□□ 0.9
SEC13-212ENST00000432213 STRN4Q9NRL3 753 aa20.7■□□□□ 0.9
SEC13-212ENST00000432213 SSH2Q76I76 1423 aa20.7■□□□□ 0.9
SEC13-212ENST00000432213 PLEKHG3A1L390 1219 aa20.69■□□□□ 0.9
SEC13-212ENST00000432213 EN1Q05925 392 aaPredicted RBP20.69■□□□□ 0.9
SEC13-212ENST00000432213 RREB1Q92766 1687 aa20.69■□□□□ 0.9
SEC13-212ENST00000432213 RGPD5Q99666 1765 aa20.69■□□□□ 0.9
SEC13-212ENST00000432213 NUP188Q5SRE5 1749 aa20.68■□□□□ 0.9
SEC13-212ENST00000432213 COL18A1P39060 1754 aa20.68■□□□□ 0.9
SEC13-212ENST00000432213 AKAP12Q02952 1782 aa20.68■□□□□ 0.9
SEC13-212ENST00000432213 SF3B2Q13435 895 aaKnown RBP20.68■□□□□ 0.9
SEC13-212ENST00000432213 CABP2Q9NPB3 220 aa20.68■□□□□ 0.9
SEC13-212ENST00000432213 CCDC61Q9Y6R9 512 aa20.68■□□□□ 0.9
SEC13-212ENST00000432213 WNK3Q9BYP7 1800 aa20.68■□□□□ 0.9
SEC13-212ENST00000432213 USP19O94966 1318 aa20.68■□□□□ 0.9
SEC13-212ENST00000432213 PARP4Q9UKK3 1724 aaKnown RBP20.67■□□□□ 0.9
SEC13-212ENST00000432213 DISP2A7MBM2 1401 aa20.65■□□□□ 0.9
SEC13-212ENST00000432213 CENPJQ9HC77 1338 aaPredicted RBP20.65■□□□□ 0.9
SEC13-212ENST00000432213 LARP1Q6PKG0 1096 aaKnown RBP20.65■□□□□ 0.9
SEC13-212ENST00000432213 USP35Q9P2H5 1018 aa20.65■□□□□ 0.9
SEC13-212ENST00000432213 SLIT3O75094 1523 aa20.64■□□□□ 0.9
SEC13-212ENST00000432213 L3MBTL2Q969R5 705 aa20.64■□□□□ 0.89
SEC13-212ENST00000432213 SIN3AQ96ST3 1273 aa20.64■□□□□ 0.89
SEC13-212ENST00000432213 PEAK1Q9H792 1746 aa20.64■□□□□ 0.89
SEC13-212ENST00000432213 LRRC37A3O60309 1634 aa20.64■□□□□ 0.89
SEC13-212ENST00000432213 COL5A2P05997 1499 aaPredicted RBP20.63■□□□□ 0.89
SEC13-212ENST00000432213 CPDO75976 1380 aa20.63■□□□□ 0.89
SEC13-212ENST00000432213 SBF2Q86WG5 1849 aa20.63■□□□□ 0.89
SEC13-212ENST00000432213 BAG6P46379 1132 aa20.63■□□□□ 0.89
SEC13-212ENST00000432213 SRPK2P78362 688 aaKnown RBP20.63■□□□□ 0.89
SEC13-212ENST00000432213 ABTB2Q8N961 1025 aa20.63■□□□□ 0.89
SEC13-212ENST00000432213 USP6P35125 1406 aa20.62■□□□□ 0.89
SEC13-212ENST00000432213 EZH2Q15910 746 aaKnown RBP20.62■□□□□ 0.89
SEC13-212ENST00000432213 TRIM37O94972 964 aa20.6■□□□□ 0.89
SEC13-212ENST00000432213 CABP1Q9NZU7 370 aa20.58■□□□□ 0.89
SEC13-212ENST00000432213 MON2Q7Z3U7 1717 aa20.58■□□□□ 0.88
SEC13-212ENST00000432213 GCP02774 474 aa20.57■□□□□ 0.88
SEC13-212ENST00000432213 R3HDM1Q15032 1099 aaKnown RBP20.57■□□□□ 0.88
SEC13-212ENST00000432213 BARGINQ6ZT62 677 aa20.57■□□□□ 0.88
SEC13-212ENST00000432213 CAMKK2Q96RR4 588 aa20.57■□□□□ 0.88
SEC13-212ENST00000432213 EVA1CP58658 441 aa20.54■□□□□ 0.88
SEC13-212ENST00000432213 ZBTB7CA1YPR0 619 aa20.53■□□□□ 0.88
SEC13-212ENST00000432213 FAM196AQ6ZSG2 479 aa20.53■□□□□ 0.88
SEC13-212ENST00000432213 NLRP13Q86W25 1043 aa20.53■□□□□ 0.88
SEC13-212ENST00000432213 TCP11L2Q8N4U5 519 aa20.53■□□□□ 0.88
SEC13-212ENST00000432213 NFAT5O94916 1531 aa20.53■□□□□ 0.88
SEC13-212ENST00000432213 CRB1P82279 1406 aa20.52■□□□□ 0.87
SEC13-212ENST00000432213 NEUROD1Q13562 356 aa20.51■□□□□ 0.87
SEC13-212ENST00000432213 AXIN2Q9Y2T1 843 aa20.51■□□□□ 0.87
SEC13-212ENST00000432213 APBA3O96018 575 aa20.5■□□□□ 0.87
SEC13-212ENST00000432213 NLRP6P59044 892 aa20.5■□□□□ 0.87
SEC13-212ENST00000432213 PTF1AQ7RTS3 328 aa20.5■□□□□ 0.87
SEC13-212ENST00000432213 USP54Q70EL1 1684 aa20.5■□□□□ 0.87
SEC13-212ENST00000432213 RGPD3A6NKT7 1758 aaPredicted RBP20.49■□□□□ 0.87
SEC13-212ENST00000432213 RGPD4Q7Z3J3 1758 aa20.49■□□□□ 0.87
SEC13-212ENST00000432213 ROCK2O75116 1388 aaKnown RBP20.49■□□□□ 0.87
SEC13-212ENST00000432213 AATKQ6ZMQ8 1374 aa20.49■□□□□ 0.87
SEC13-212ENST00000432213 CPSF1Q10570 1443 aaKnown RBP20.49■□□□□ 0.87
SEC13-212ENST00000432213 LTN1O94822 1766 aa20.49■□□□□ 0.87
SEC13-212ENST00000432213 BRD4O60885 1362 aaPredicted RBP20.48■□□□□ 0.87
SEC13-212ENST00000432213 CD163L1Q9NR16 1453 aa20.48■□□□□ 0.87
SEC13-212ENST00000432213 PDE3BQ13370 1112 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms