RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 KIF20BQ96Q89 1820 aa18.49■□□□□ 0.55
RTN1-204ENST00000432103 ANKRD26Q9UPS8 1709 aa18.48■□□□□ 0.55
RTN1-204ENST00000432103 LRRC7Q96NW7 1537 aa18.48■□□□□ 0.55
RTN1-204ENST00000432103 GGNBP2Q9H3C7 697 aa18.48■□□□□ 0.55
RTN1-204ENST00000432103 CCDC184Q52MB2 194 aa18.47■□□□□ 0.55
RTN1-204ENST00000432103 TTC21BQ7Z4L5 1316 aa18.47■□□□□ 0.55
RTN1-204ENST00000432103 COG3Q96JB2 828 aa18.47■□□□□ 0.55
RTN1-204ENST00000432103 RGPD8O14715 1765 aaPredicted RBP18.46■□□□□ 0.55
RTN1-204ENST00000432103 FAM9BQ8IZU0 186 aa18.46■□□□□ 0.55
RTN1-204ENST00000432103 CFAP53Q96M91 514 aa18.46■□□□□ 0.55
RTN1-204ENST00000432103 C1orf167Q5SNV9 1468 aa18.45■□□□□ 0.54
RTN1-204ENST00000432103 PNISRQ8TF01 805 aaKnown RBP18.45■□□□□ 0.54
RTN1-204ENST00000432103 NRKQ7Z2Y5 1582 aa18.45■□□□□ 0.54
RTN1-204ENST00000432103 KIF1AQ12756 1690 aa18.45■□□□□ 0.54
RTN1-204ENST00000432103 SSH2Q76I76 1423 aa18.44■□□□□ 0.54
RTN1-204ENST00000432103 PSME1Q06323 249 aa18.43■□□□□ 0.54
RTN1-204ENST00000432103 MST1RQ04912 1400 aa18.43■□□□□ 0.54
RTN1-204ENST00000432103 TNNT2P45379 298 aaPredicted RBP18.42■□□□□ 0.54
RTN1-204ENST00000432103 NME9Q86XW9 330 aa18.42■□□□□ 0.54
RTN1-204ENST00000432103 INSRP06213 1382 aa18.42■□□□□ 0.54
RTN1-204ENST00000432103 WDR43Q15061 677 aaKnown RBP eCLIP18.41■□□□□ 0.54
RTN1-204ENST00000432103 AATKQ6ZMQ8 1374 aa18.4■□□□□ 0.54
RTN1-204ENST00000432103 USP31Q70CQ4 1352 aa18.39■□□□□ 0.54
RTN1-204ENST00000432103 MTHFSP49914 203 aa18.39■□□□□ 0.53
RTN1-204ENST00000432103 ORAI2Q96SN7 254 aa18.39■□□□□ 0.53
RTN1-204ENST00000432103 XIRP1Q702N8 1843 aaKnown RBP18.39■□□□□ 0.53
RTN1-204ENST00000432103 PAK3O75914 559 aaPredicted RBP18.37■□□□□ 0.53
RTN1-204ENST00000432103 OVOS2A0A0J9YW53 1432 aa18.37■□□□□ 0.53
RTN1-204ENST00000432103 OVOS2Q6IE36 1432 aa18.37■□□□□ 0.53
RTN1-204ENST00000432103 NPHP3Q7Z494 1330 aa18.36■□□□□ 0.53
RTN1-204ENST00000432103 ABTB2Q8N961 1025 aa18.36■□□□□ 0.53
RTN1-204ENST00000432103 FOXO3O43524 673 aa18.35■□□□□ 0.53
RTN1-204ENST00000432103 SLAIN2Q9P270 581 aa18.35■□□□□ 0.53
RTN1-204ENST00000432103 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
RTN1-204ENST00000432103 NLRP6P59044 892 aa18.34■□□□□ 0.53
RTN1-204ENST00000432103 HNRNPUQ00839 825 aaKnown RBP eCLIP18.34■□□□□ 0.53
RTN1-204ENST00000432103 KRT28Q7Z3Y7 464 aa18.34■□□□□ 0.53
RTN1-204ENST00000432103 USP54Q70EL1 1684 aa18.32■□□□□ 0.52
RTN1-204ENST00000432103 POLKQ9UBT6 870 aa18.32■□□□□ 0.52
RTN1-204ENST00000432103 ZRANB1Q9UGI0 708 aa18.32■□□□□ 0.52
RTN1-204ENST00000432103 SMG6Q86US8 1419 aaKnown RBP18.32■□□□□ 0.52
RTN1-204ENST00000432103 PIK3C2AO00443 1686 aa18.31■□□□□ 0.52
RTN1-204ENST00000432103 LTBP4Q8N2S1 1624 aa18.31■□□□□ 0.52
RTN1-204ENST00000432103 SBNO1A3KN83 1393 aa18.3■□□□□ 0.52
RTN1-204ENST00000432103 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
RTN1-204ENST00000432103 KCNH5Q8NCM2 988 aa18.3■□□□□ 0.52
RTN1-204ENST00000432103 CDK12Q9NYV4 1490 aaPredicted RBP18.29■□□□□ 0.52
RTN1-204ENST00000432103 DIAPH1O60610 1272 aaKnown RBP18.29■□□□□ 0.52
RTN1-204ENST00000432103 BRINP3Q76B58 766 aa18.29■□□□□ 0.52
RTN1-204ENST00000432103 ADAMTS8Q9UP79 889 aa18.29■□□□□ 0.52
RTN1-204ENST00000432103 KIF24Q5T7B8 1368 aa18.28■□□□□ 0.52
RTN1-204ENST00000432103 PPM1GO15355 546 aaPredicted RBP18.28■□□□□ 0.52
RTN1-204ENST00000432103 PNNQ9H307 717 aaKnown RBP18.28■□□□□ 0.52
RTN1-204ENST00000432103 BLMP54132 1417 aaPredicted RBP18.27■□□□□ 0.52
RTN1-204ENST00000432103 ZBED9Q6R2W3 1325 aa18.27■□□□□ 0.51
RTN1-204ENST00000432103 MAP2P11137 1827 aaKnown RBP18.26■□□□□ 0.51
RTN1-204ENST00000432103 TRPM3Q9HCF6 1732 aaPredicted RBP18.26■□□□□ 0.51
RTN1-204ENST00000432103 NGEFQ8N5V2 710 aa18.25■□□□□ 0.51
RTN1-204ENST00000432103 ARHGEF10O15013 1369 aa18.25■□□□□ 0.51
RTN1-204ENST00000432103 XPCQ01831 940 aaPredicted RBP18.25■□□□□ 0.51
RTN1-204ENST00000432103 LMOD2Q6P5Q4 547 aa18.25■□□□□ 0.51
RTN1-204ENST00000432103 EMILIN1Q9Y6C2 1016 aa18.25■□□□□ 0.51
RTN1-204ENST00000432103 COL3A1P02461 1466 aaPredicted RBP18.24■□□□□ 0.51
RTN1-204ENST00000432103 RRS1Q15050 365 aaKnown RBP18.24■□□□□ 0.51
RTN1-204ENST00000432103 NUTM2GQ5VZR2 741 aa18.23■□□□□ 0.51
RTN1-204ENST00000432103 TNS3Q68CZ2 1445 aa18.23■□□□□ 0.51
RTN1-204ENST00000432103 U2AF1L5P0DN76 240 aaPredicted RBP18.23■□□□□ 0.51
RTN1-204ENST00000432103 U2AF1Q01081 240 aaKnown RBP eCLIP18.23■□□□□ 0.51
RTN1-204ENST00000432103 SUPT16HQ9Y5B9 1047 aaKnown RBP18.23■□□□□ 0.51
RTN1-204ENST00000432103 SHPRHQ149N8 1683 aa18.23■□□□□ 0.51
RTN1-204ENST00000432103 FLT4P35916 1363 aa18.23■□□□□ 0.51
RTN1-204ENST00000432103 PXDNQ92626 1479 aa18.23■□□□□ 0.51
RTN1-204ENST00000432103 AMPHP49418 695 aa18.22■□□□□ 0.51
RTN1-204ENST00000432103 U2SURPO15042 1029 aaKnown RBP18.22■□□□□ 0.51
RTN1-204ENST00000432103 RTL1A6NKG5 1358 aa18.22■□□□□ 0.51
RTN1-204ENST00000432103 SOX12O15370 315 aa18.21■□□□□ 0.51
RTN1-204ENST00000432103 TOM1O60784 492 aa18.21■□□□□ 0.51
RTN1-204ENST00000432103 FBLN1P23142 703 aa18.21■□□□□ 0.51
RTN1-204ENST00000432103 USP19O94966 1318 aa18.21■□□□□ 0.51
RTN1-204ENST00000432103 SOS2Q07890 1332 aaPredicted RBP18.21■□□□□ 0.51
RTN1-204ENST00000432103 MAP3K19Q56UN5 1328 aa18.2■□□□□ 0.5
RTN1-204ENST00000432103 SPATA31A3Q5VYP0 1347 aa18.2■□□□□ 0.5
RTN1-204ENST00000432103 ALS2Q96Q42 1657 aa18.2■□□□□ 0.5
RTN1-204ENST00000432103 SLIT3O75094 1523 aa18.2■□□□□ 0.5
RTN1-204ENST00000432103 NEFMP07197 916 aa18.2■□□□□ 0.5
RTN1-204ENST00000432103 RUNDC1Q96C34 613 aa18.2■□□□□ 0.5
RTN1-204ENST00000432103 IQSEC2Q5JU85 1478 aa18.19■□□□□ 0.5
RTN1-204ENST00000432103 MARF1Q9Y4F3 1742 aaKnown RBP18.19■□□□□ 0.5
RTN1-204ENST00000432103 GCP02774 474 aa18.19■□□□□ 0.5
RTN1-204ENST00000432103 FCHSD2O94868 740 aa18.18■□□□□ 0.5
RTN1-204ENST00000432103 IL13P35225 146 aa18.18■□□□□ 0.5
RTN1-204ENST00000432103 PDE3BQ13370 1112 aa18.17■□□□□ 0.5
RTN1-204ENST00000432103 DDX17Q92841 729 aaKnown RBP18.17■□□□□ 0.5
RTN1-204ENST00000432103 NHSL1Q5SYE7 1610 aa18.17■□□□□ 0.5
RTN1-204ENST00000432103 NFAT5O94916 1531 aa18.16■□□□□ 0.5
RTN1-204ENST00000432103 NCBP3Q53F19 620 aaKnown RBP18.16■□□□□ 0.5
RTN1-204ENST00000432103 MAPK8IP3Q9UPT6 1336 aa18.16■□□□□ 0.5
RTN1-204ENST00000432103 HOXC9P31274 260 aa18.15■□□□□ 0.5
RTN1-204ENST00000432103 CCDC146Q8IYE0 955 aa18.14■□□□□ 0.5
RTN1-204ENST00000432103 IP6K1Q92551 441 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms