RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 SPATA31A3Q5VYP0 1347 aa13.84□□□□□ -0.19
CDC42-IT1-201ENST00000431803 BCL9LQ86UU0 1499 aa13.83□□□□□ -0.2
CDC42-IT1-201ENST00000431803 EVX2Q03828 476 aa13.83□□□□□ -0.2
CDC42-IT1-201ENST00000431803 RGPD8O14715 1765 aaPredicted RBP13.83□□□□□ -0.2
CDC42-IT1-201ENST00000431803 USP32Q8NFA0 1604 aa13.82□□□□□ -0.2
CDC42-IT1-201ENST00000431803 ANKARQ7Z5J8 1434 aa13.82□□□□□ -0.2
CDC42-IT1-201ENST00000431803 SP7Q8TDD2 431 aaPredicted RBP13.82□□□□□ -0.2
CDC42-IT1-201ENST00000431803 STAC3Q96MF2 364 aa13.82□□□□□ -0.2
CDC42-IT1-201ENST00000431803 TRPC5Q9UL62 973 aaPredicted RBP13.82□□□□□ -0.2
CDC42-IT1-201ENST00000431803 TNS3Q68CZ2 1445 aa13.81□□□□□ -0.2
CDC42-IT1-201ENST00000431803 SAFB2Q14151 953 aaKnown RBP eCLIP13.81□□□□□ -0.2
CDC42-IT1-201ENST00000431803 PHF8Q9UPP1 1060 aa13.81□□□□□ -0.2
CDC42-IT1-201ENST00000431803 KRT28Q7Z3Y7 464 aa13.8□□□□□ -0.2
CDC42-IT1-201ENST00000431803 DCAF11Q8TEB1 546 aa13.8□□□□□ -0.2
CDC42-IT1-201ENST00000431803 POGKQ9P215 609 aa13.8□□□□□ -0.2
CDC42-IT1-201ENST00000431803 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.8□□□□□ -0.2
CDC42-IT1-201ENST00000431803 SBNO1A3KN83 1393 aa13.79□□□□□ -0.2
CDC42-IT1-201ENST00000431803 SLIT2O94813 1529 aa13.79□□□□□ -0.2
CDC42-IT1-201ENST00000431803 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
CDC42-IT1-201ENST00000431803 KDM2AQ9Y2K7 1162 aa13.78□□□□□ -0.2
CDC42-IT1-201ENST00000431803 TULP4Q9NRJ4 1543 aa13.78□□□□□ -0.2
CDC42-IT1-201ENST00000431803 SRCAPQ6ZRS2 3230 aa13.77□□□□□ -0.2
CDC42-IT1-201ENST00000431803 ABCA3Q99758 1704 aa13.77□□□□□ -0.21
CDC42-IT1-201ENST00000431803 ARHGEF28Q8N1W1 1705 aaKnown RBP13.76□□□□□ -0.21
CDC42-IT1-201ENST00000431803 ARHGEF10O15013 1369 aa13.76□□□□□ -0.21
CDC42-IT1-201ENST00000431803 EIF3AQ14152 1382 aaKnown RBP13.76□□□□□ -0.21
CDC42-IT1-201ENST00000431803 ATAD2Q6PL18 1390 aa13.76□□□□□ -0.21
CDC42-IT1-201ENST00000431803 PSME1Q06323 249 aa13.76□□□□□ -0.21
CDC42-IT1-201ENST00000431803 TRPM3Q9HCF6 1732 aaPredicted RBP13.76□□□□□ -0.21
CDC42-IT1-201ENST00000431803 MINK1Q8N4C8 1332 aaPredicted RBP13.75□□□□□ -0.21
CDC42-IT1-201ENST00000431803 PRR36Q9H6K5 1346 aa13.75□□□□□ -0.21
CDC42-IT1-201ENST00000431803 MIER1Q8N108 512 aa13.75□□□□□ -0.21
CDC42-IT1-201ENST00000431803 HIRIP3Q9BW71 556 aaPredicted RBP13.75□□□□□ -0.21
CDC42-IT1-201ENST00000431803 WASLO00401 505 aaPredicted RBP13.74□□□□□ -0.21
CDC42-IT1-201ENST00000431803 CD44P16070 742 aaKnown RBP13.74□□□□□ -0.21
CDC42-IT1-201ENST00000431803 MNX1P50219 401 aaPredicted RBP13.74□□□□□ -0.21
CDC42-IT1-201ENST00000431803 UNC5CLQ8IV45 518 aa13.74□□□□□ -0.21
CDC42-IT1-201ENST00000431803 PMFBP1Q8TBY8 1022 aa13.74□□□□□ -0.21
CDC42-IT1-201ENST00000431803 GJD4Q96KN9 370 aaPredicted RBP13.74□□□□□ -0.21
CDC42-IT1-201ENST00000431803 GLI3P10071 1580 aa13.74□□□□□ -0.21
CDC42-IT1-201ENST00000431803 RALGAPBQ86X10 1494 aa13.74□□□□□ -0.21
CDC42-IT1-201ENST00000431803 KIAA1210Q9ULL0 1709 aa13.73□□□□□ -0.21
CDC42-IT1-201ENST00000431803 ALS2Q96Q42 1657 aa13.73□□□□□ -0.21
CDC42-IT1-201ENST00000431803 NWD2Q9ULI1 1742 aa13.73□□□□□ -0.21
CDC42-IT1-201ENST00000431803 PLCH1Q4KWH8 1693 aa13.72□□□□□ -0.21
CDC42-IT1-201ENST00000431803 CABLES1Q8TDN4 633 aa13.72□□□□□ -0.21
CDC42-IT1-201ENST00000431803 ATP7BP35670 1465 aa13.72□□□□□ -0.21
CDC42-IT1-201ENST00000431803 PLEKHG5O94827 1062 aa13.71□□□□□ -0.21
CDC42-IT1-201ENST00000431803 FBXO3Q9UK99 471 aa13.71□□□□□ -0.21
CDC42-IT1-201ENST00000431803 GPRASP1Q5JY77 1395 aa13.71□□□□□ -0.22
CDC42-IT1-201ENST00000431803 HAP1P54257 671 aaPredicted RBP13.7□□□□□ -0.22
CDC42-IT1-201ENST00000431803 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
CDC42-IT1-201ENST00000431803 ITSN1Q15811 1721 aa13.7□□□□□ -0.22
CDC42-IT1-201ENST00000431803 VPS72Q15906 364 aa13.69□□□□□ -0.22
CDC42-IT1-201ENST00000431803 LMOD2Q6P5Q4 547 aa13.69□□□□□ -0.22
CDC42-IT1-201ENST00000431803 CRYBG1Q9Y4K1 1723 aa13.69□□□□□ -0.22
CDC42-IT1-201ENST00000431803 TOPAZ1Q8N9V7 1692 aa13.68□□□□□ -0.22
CDC42-IT1-201ENST00000431803 NRAPQ86VF7 1730 aa13.67□□□□□ -0.22
CDC42-IT1-201ENST00000431803 FAM83GA6ND36 823 aa13.67□□□□□ -0.22
CDC42-IT1-201ENST00000431803 NGDNQ8NEJ9 315 aaKnown RBP13.66□□□□□ -0.22
CDC42-IT1-201ENST00000431803 NUDT16Q96DE0 195 aaKnown RBP13.66□□□□□ -0.22
CDC42-IT1-201ENST00000431803 COL14A1Q05707 1796 aaKnown RBP13.66□□□□□ -0.22
CDC42-IT1-201ENST00000431803 BRWD3Q6RI45 1802 aa13.65□□□□□ -0.22
CDC42-IT1-201ENST00000431803 ONECUT3O60422 494 aaPredicted RBP13.65□□□□□ -0.22
CDC42-IT1-201ENST00000431803 NBPF1Q3BBV0 1214 aa13.65□□□□□ -0.22
CDC42-IT1-201ENST00000431803 CCDC125Q86Z20 511 aa13.65□□□□□ -0.22
CDC42-IT1-201ENST00000431803 POLR3AO14802 1390 aaPredicted RBP13.65□□□□□ -0.22
CDC42-IT1-201ENST00000431803 CDK19Q9BWU1 502 aa13.64□□□□□ -0.23
CDC42-IT1-201ENST00000431803 SEPT12Q8IYM1 358 aa13.63□□□□□ -0.23
CDC42-IT1-201ENST00000431803 PHRF1Q9P1Y6 1649 aaKnown RBP13.62□□□□□ -0.23
CDC42-IT1-201ENST00000431803 PAK3O75914 559 aaPredicted RBP13.62□□□□□ -0.23
CDC42-IT1-201ENST00000431803 BTG4Q9NY30 223 aa13.62□□□□□ -0.23
CDC42-IT1-201ENST00000431803 CCDC61Q9Y6R9 512 aa13.62□□□□□ -0.23
CDC42-IT1-201ENST00000431803 BLMP54132 1417 aaPredicted RBP13.62□□□□□ -0.23
CDC42-IT1-201ENST00000431803 PLEKHG3A1L390 1219 aa13.61□□□□□ -0.23
CDC42-IT1-201ENST00000431803 ZRANB1Q9UGI0 708 aa13.61□□□□□ -0.23
CDC42-IT1-201ENST00000431803 CCDC9Q9Y3X0 531 aaKnown RBP13.61□□□□□ -0.23
CDC42-IT1-201ENST00000431803 ACEP12821 1306 aa13.61□□□□□ -0.23
CDC42-IT1-201ENST00000431803 CENPJQ9HC77 1338 aaPredicted RBP13.6□□□□□ -0.23
CDC42-IT1-201ENST00000431803 QRICH2Q9H0J4 1663 aa13.59□□□□□ -0.23
CDC42-IT1-201ENST00000431803 NBPF8Q3BBV2 869 aa13.59□□□□□ -0.23
CDC42-IT1-201ENST00000431803 L3MBTL2Q969R5 705 aa13.59□□□□□ -0.23
CDC42-IT1-201ENST00000431803 SPATA31A5Q5VU36 1347 aa13.59□□□□□ -0.23
CDC42-IT1-201ENST00000431803 SPATA31A7Q8IWB4 1347 aa13.59□□□□□ -0.23
CDC42-IT1-201ENST00000431803 KIAA0232Q92628 1395 aa13.58□□□□□ -0.23
CDC42-IT1-201ENST00000431803 NRKQ7Z2Y5 1582 aa13.58□□□□□ -0.23
CDC42-IT1-201ENST00000431803 TRPM1Q7Z4N2 1603 aa13.58□□□□□ -0.24
CDC42-IT1-201ENST00000431803 KRT27Q7Z3Y8 459 aa13.58□□□□□ -0.24
CDC42-IT1-201ENST00000431803 PRDM11Q9NQV5 511 aa13.58□□□□□ -0.24
CDC42-IT1-201ENST00000431803 THSD7AQ9UPZ6 1657 aa13.58□□□□□ -0.24
CDC42-IT1-201ENST00000431803 PPIP5K1Q6PFW1 1433 aa13.57□□□□□ -0.24
CDC42-IT1-201ENST00000431803 FAM98CQ17RN3 349 aaKnown RBP13.57□□□□□ -0.24
CDC42-IT1-201ENST00000431803 USP19O94966 1318 aa13.57□□□□□ -0.24
CDC42-IT1-201ENST00000431803 SIN3AQ96ST3 1273 aa13.56□□□□□ -0.24
CDC42-IT1-201ENST00000431803 VASPP50552 380 aaPredicted RBP13.55□□□□□ -0.24
CDC42-IT1-201ENST00000431803 SRPK2P78362 688 aaKnown RBP13.55□□□□□ -0.24
CDC42-IT1-201ENST00000431803 CABP2Q9NPB3 220 aa13.55□□□□□ -0.24
CDC42-IT1-201ENST00000431803 BRD4O60885 1362 aaPredicted RBP13.55□□□□□ -0.24
CDC42-IT1-201ENST00000431803 CPDO75976 1380 aa13.55□□□□□ -0.24
CDC42-IT1-201ENST00000431803 LMO7Q8WWI1 1683 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms