RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 MARF1Q9Y4F3 1742 aaKnown RBP20.08■□□□□ 0.81
CSTF3-202ENST00000431742 PIK3C2AO00443 1686 aa20.08■□□□□ 0.81
CSTF3-202ENST00000431742 C11orf95C9JLR9 678 aaPredicted RBP20.08■□□□□ 0.81
CSTF3-202ENST00000431742 PSME1Q06323 249 aa20.08■□□□□ 0.81
CSTF3-202ENST00000431742 LRRC59Q96AG4 307 aaKnown RBP20.08■□□□□ 0.81
CSTF3-202ENST00000431742 SPATA31A3Q5VYP0 1347 aa20.07■□□□□ 0.8
CSTF3-202ENST00000431742 USP54Q70EL1 1684 aa20.07■□□□□ 0.8
CSTF3-202ENST00000431742 SLC12A5Q9H2X9 1139 aa20.07■□□□□ 0.8
CSTF3-202ENST00000431742 A0A1W2PP64 1363 aa20.06■□□□□ 0.8
CSTF3-202ENST00000431742 PHRF1Q9P1Y6 1649 aaKnown RBP20.05■□□□□ 0.8
CSTF3-202ENST00000431742 TMC1Q8TDI8 760 aa20.04■□□□□ 0.8
CSTF3-202ENST00000431742 ANKRD36BQ8N2N9 1353 aa20.04■□□□□ 0.8
CSTF3-202ENST00000431742 KIF7Q2M1P5 1343 aa20.03■□□□□ 0.8
CSTF3-202ENST00000431742 ZNF692Q9BU19 519 aaPredicted RBP20.03■□□□□ 0.8
CSTF3-202ENST00000431742 KIF20BQ96Q89 1820 aa20.03■□□□□ 0.8
CSTF3-202ENST00000431742 ARHGEF10O15013 1369 aa20.03■□□□□ 0.8
CSTF3-202ENST00000431742 KTN1Q86UP2 1357 aaKnown RBP20.03■□□□□ 0.8
CSTF3-202ENST00000431742 TERF2IPQ9NYB0 399 aa20.02■□□□□ 0.8
CSTF3-202ENST00000431742 EDC4Q6P2E9 1401 aaKnown RBP20.02■□□□□ 0.79
CSTF3-202ENST00000431742 CCDC7Q96M83 1385 aa20.01■□□□□ 0.79
CSTF3-202ENST00000431742 LRP6O75581 1613 aa20.01■□□□□ 0.79
CSTF3-202ENST00000431742 SPATA31A6Q5VVP1 1343 aa20■□□□□ 0.79
CSTF3-202ENST00000431742 HDGFL2Q7Z4V5 671 aaPredicted RBP19.99■□□□□ 0.79
CSTF3-202ENST00000431742 WASHC2AQ641Q2 1341 aa19.99■□□□□ 0.79
CSTF3-202ENST00000431742 TTC21BQ7Z4L5 1316 aa19.98■□□□□ 0.79
CSTF3-202ENST00000431742 TTC21AQ8NDW8 1320 aa19.98■□□□□ 0.79
CSTF3-202ENST00000431742 ANKRD26Q9UPS8 1709 aa19.97■□□□□ 0.79
CSTF3-202ENST00000431742 SLIT3O75094 1523 aa19.97■□□□□ 0.79
CSTF3-202ENST00000431742 PAK3O75914 559 aaPredicted RBP19.96■□□□□ 0.79
CSTF3-202ENST00000431742 POLR3GLQ9BT43 218 aa19.95■□□□□ 0.78
CSTF3-202ENST00000431742 USP19O94966 1318 aa19.93■□□□□ 0.78
CSTF3-202ENST00000431742 USP31Q70CQ4 1352 aa19.93■□□□□ 0.78
CSTF3-202ENST00000431742 NSD3Q9BZ95 1437 aa19.93■□□□□ 0.78
CSTF3-202ENST00000431742 LMOD2Q6P5Q4 547 aa19.92■□□□□ 0.78
CSTF3-202ENST00000431742 ABTB2Q8N961 1025 aa19.92■□□□□ 0.78
CSTF3-202ENST00000431742 CARD14Q9BXL6 1004 aa19.92■□□□□ 0.78
CSTF3-202ENST00000431742 OVOS2A0A0J9YW53 1432 aa19.92■□□□□ 0.78
CSTF3-202ENST00000431742 OVOS2Q6IE36 1432 aa19.92■□□□□ 0.78
CSTF3-202ENST00000431742 PLCH1Q4KWH8 1693 aa19.91■□□□□ 0.78
CSTF3-202ENST00000431742 NFAT5O94916 1531 aa19.9■□□□□ 0.78
CSTF3-202ENST00000431742 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.89■□□□□ 0.77
CSTF3-202ENST00000431742 LTN1O94822 1766 aa19.88■□□□□ 0.77
CSTF3-202ENST00000431742 COL14A1Q05707 1796 aaKnown RBP19.88■□□□□ 0.77
CSTF3-202ENST00000431742 NWD2Q9ULI1 1742 aa19.88■□□□□ 0.77
CSTF3-202ENST00000431742 NUTM2GQ5VZR2 741 aa19.88■□□□□ 0.77
CSTF3-202ENST00000431742 NME9Q86XW9 330 aa19.88■□□□□ 0.77
CSTF3-202ENST00000431742 CABLES1Q8TDN4 633 aa19.88■□□□□ 0.77
CSTF3-202ENST00000431742 PANK3Q9H999 370 aa19.88■□□□□ 0.77
CSTF3-202ENST00000431742 NUTM2BA6NNL0 878 aaPredicted RBP19.87■□□□□ 0.77
CSTF3-202ENST00000431742 NUTM2EB1AL46 878 aaPredicted RBP19.87■□□□□ 0.77
CSTF3-202ENST00000431742 NLRP13Q86W25 1043 aa19.87■□□□□ 0.77
CSTF3-202ENST00000431742 NUTM2AQ8IVF1 878 aaPredicted RBP19.87■□□□□ 0.77
CSTF3-202ENST00000431742 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.87■□□□□ 0.77
CSTF3-202ENST00000431742 NLRP6P59044 892 aa19.86■□□□□ 0.77
CSTF3-202ENST00000431742 NRAPQ86VF7 1730 aa19.85■□□□□ 0.77
CSTF3-202ENST00000431742 LMO7Q8WWI1 1683 aa19.85■□□□□ 0.77
CSTF3-202ENST00000431742 ZRANB1Q9UGI0 708 aa19.85■□□□□ 0.77
CSTF3-202ENST00000431742 COL18A1P39060 1754 aa19.85■□□□□ 0.77
CSTF3-202ENST00000431742 FYB1O15117 783 aa19.83■□□□□ 0.77
CSTF3-202ENST00000431742 CPDO75976 1380 aa19.83■□□□□ 0.76
CSTF3-202ENST00000431742 CGNL1Q0VF96 1302 aa19.82■□□□□ 0.76
CSTF3-202ENST00000431742 PLEKHG5O94827 1062 aa19.82■□□□□ 0.76
CSTF3-202ENST00000431742 RGPD5Q99666 1765 aa19.81■□□□□ 0.76
CSTF3-202ENST00000431742 ADAMTS2O95450 1211 aa19.81■□□□□ 0.76
CSTF3-202ENST00000431742 GCP02774 474 aa19.81■□□□□ 0.76
CSTF3-202ENST00000431742 NSD2O96028 1365 aa19.81■□□□□ 0.76
CSTF3-202ENST00000431742 SLIT2O94813 1529 aa19.81■□□□□ 0.76
CSTF3-202ENST00000431742 ABCC6O95255 1503 aa19.81■□□□□ 0.76
CSTF3-202ENST00000431742 PER1O15534 1290 aaPredicted RBP19.8■□□□□ 0.76
CSTF3-202ENST00000431742 HAP1P54257 671 aaPredicted RBP19.8■□□□□ 0.76
CSTF3-202ENST00000431742 KIAA0232Q92628 1395 aa19.8■□□□□ 0.76
CSTF3-202ENST00000431742 MEX3CQ5U5Q3 659 aaKnown RBP19.79■□□□□ 0.76
CSTF3-202ENST00000431742 MAP2P11137 1827 aaKnown RBP19.79■□□□□ 0.76
CSTF3-202ENST00000431742 KCNH5Q8NCM2 988 aa19.78■□□□□ 0.76
CSTF3-202ENST00000431742 GGNBP2Q9H3C7 697 aa19.78■□□□□ 0.76
CSTF3-202ENST00000431742 COG3Q96JB2 828 aa19.77■□□□□ 0.76
CSTF3-202ENST00000431742 KNSTRNQ9Y448 316 aa19.77■□□□□ 0.76
CSTF3-202ENST00000431742 NPC1L1Q9UHC9 1359 aa19.76■□□□□ 0.75
CSTF3-202ENST00000431742 AMER1Q5JTC6 1135 aaPredicted RBP19.76■□□□□ 0.75
CSTF3-202ENST00000431742 FNBP4Q8N3X1 1017 aaPredicted RBP19.76■□□□□ 0.75
CSTF3-202ENST00000431742 C8orf37Q96NL8 207 aa19.76■□□□□ 0.75
CSTF3-202ENST00000431742 BCL9LQ86UU0 1499 aa19.75■□□□□ 0.75
CSTF3-202ENST00000431742 PEAK1Q9H792 1746 aa19.75■□□□□ 0.75
CSTF3-202ENST00000431742 CAMTA1Q9Y6Y1 1673 aa19.75■□□□□ 0.75
CSTF3-202ENST00000431742 FAM83GA6ND36 823 aa19.74■□□□□ 0.75
CSTF3-202ENST00000431742 ZNF316A6NFI3 1004 aaPredicted RBP19.74■□□□□ 0.75
CSTF3-202ENST00000431742 ZC3H6P61129 1189 aaKnown RBP19.74■□□□□ 0.75
CSTF3-202ENST00000431742 PRDM11Q9NQV5 511 aa19.74■□□□□ 0.75
CSTF3-202ENST00000431742 AFF2P51816 1311 aa19.74■□□□□ 0.75
CSTF3-202ENST00000431742 AATKQ6ZMQ8 1374 aa19.73■□□□□ 0.75
CSTF3-202ENST00000431742 ARHGEF25Q86VW2 580 aa19.73■□□□□ 0.75
CSTF3-202ENST00000431742 NGLY1Q96IV0 654 aa19.73■□□□□ 0.75
CSTF3-202ENST00000431742 RGS17Q9UGC6 210 aaPredicted RBP19.72■□□□□ 0.75
CSTF3-202ENST00000431742 SOX12O15370 315 aa19.71■□□□□ 0.75
CSTF3-202ENST00000431742 CHRNA2Q15822 529 aa19.7■□□□□ 0.74
CSTF3-202ENST00000431742 COL5A2P05997 1499 aaPredicted RBP19.7■□□□□ 0.74
CSTF3-202ENST00000431742 FAM208AQ9UK61 1670 aaKnown RBP19.7■□□□□ 0.74
CSTF3-202ENST00000431742 ATRNO75882 1429 aa19.69■□□□□ 0.74
CSTF3-202ENST00000431742 SMG6Q86US8 1419 aaKnown RBP19.68■□□□□ 0.74
CSTF3-202ENST00000431742 MAP3K19Q56UN5 1328 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms