RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 ABCA3Q99758 1704 aa25.98■■□□□ 1.75
DDR1-236ENST00000431373 TMC1Q8TDI8 760 aa25.98■■□□□ 1.75
DDR1-236ENST00000431373 ZNF692Q9BU19 519 aaPredicted RBP25.97■■□□□ 1.75
DDR1-236ENST00000431373 CPSF1Q10570 1443 aaKnown RBP25.97■■□□□ 1.75
DDR1-236ENST00000431373 NINLQ9Y2I6 1382 aa25.96■■□□□ 1.75
DDR1-236ENST00000431373 MARF1Q9Y4F3 1742 aaKnown RBP25.96■■□□□ 1.75
DDR1-236ENST00000431373 SLC12A5Q9H2X9 1139 aa25.95■■□□□ 1.74
DDR1-236ENST00000431373 NRKQ7Z2Y5 1582 aa25.95■■□□□ 1.74
DDR1-236ENST00000431373 CD163L1Q9NR16 1453 aa25.94■■□□□ 1.74
DDR1-236ENST00000431373 MEX3CQ5U5Q3 659 aaKnown RBP25.94■■□□□ 1.74
DDR1-236ENST00000431373 CRYBG1Q9Y4K1 1723 aa25.93■■□□□ 1.74
DDR1-236ENST00000431373 KTN1Q86UP2 1357 aaKnown RBP25.93■■□□□ 1.74
DDR1-236ENST00000431373 MYOM1P52179 1685 aa25.93■■□□□ 1.74
DDR1-236ENST00000431373 SSH2Q76I76 1423 aa25.92■■□□□ 1.74
DDR1-236ENST00000431373 HDGFL2Q7Z4V5 671 aaPredicted RBP25.91■■□□□ 1.74
DDR1-236ENST00000431373 PHF23Q9BUL5 403 aaPredicted RBP25.91■■□□□ 1.74
DDR1-236ENST00000431373 TERF2IPQ9NYB0 399 aa25.91■■□□□ 1.74
DDR1-236ENST00000431373 ADAMTS2O95450 1211 aa25.89■■□□□ 1.74
DDR1-236ENST00000431373 PIK3C2AO00443 1686 aa25.89■■□□□ 1.73
DDR1-236ENST00000431373 PHRF1Q9P1Y6 1649 aaKnown RBP25.88■■□□□ 1.73
DDR1-236ENST00000431373 A0A1W2PP64 1363 aa25.88■■□□□ 1.73
DDR1-236ENST00000431373 PLEKHG5O94827 1062 aa25.88■■□□□ 1.73
DDR1-236ENST00000431373 HAP1P54257 671 aaPredicted RBP25.88■■□□□ 1.73
DDR1-236ENST00000431373 ABTB2Q8N961 1025 aa25.88■■□□□ 1.73
DDR1-236ENST00000431373 CABLES1Q8TDN4 633 aa25.88■■□□□ 1.73
DDR1-236ENST00000431373 TTC21BQ7Z4L5 1316 aa25.87■■□□□ 1.73
DDR1-236ENST00000431373 TTC21AQ8NDW8 1320 aa25.86■■□□□ 1.73
DDR1-236ENST00000431373 ANKRD36BQ8N2N9 1353 aa25.85■■□□□ 1.73
DDR1-236ENST00000431373 NUTM2GQ5VZR2 741 aa25.85■■□□□ 1.73
DDR1-236ENST00000431373 EDC4Q6P2E9 1401 aaKnown RBP25.85■■□□□ 1.73
DDR1-236ENST00000431373 C8orf37Q96NL8 207 aa25.84■■□□□ 1.73
DDR1-236ENST00000431373 POLR3GLQ9BT43 218 aa25.84■■□□□ 1.73
DDR1-236ENST00000431373 NLRP13Q86W25 1043 aa25.82■■□□□ 1.72
DDR1-236ENST00000431373 USP19O94966 1318 aa25.81■■□□□ 1.72
DDR1-236ENST00000431373 C11orf95C9JLR9 678 aaPredicted RBP25.8■■□□□ 1.72
DDR1-236ENST00000431373 ZEB1P37275 1124 aaPredicted RBP25.8■■□□□ 1.72
DDR1-236ENST00000431373 NLRP6P59044 892 aa25.8■■□□□ 1.72
DDR1-236ENST00000431373 NGLY1Q96IV0 654 aa25.8■■□□□ 1.72
DDR1-236ENST00000431373 USP54Q70EL1 1684 aa25.8■■□□□ 1.72
DDR1-236ENST00000431373 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.79■■□□□ 1.72
DDR1-236ENST00000431373 RGS17Q9UGC6 210 aaPredicted RBP25.79■■□□□ 1.72
DDR1-236ENST00000431373 AFF2P51816 1311 aa25.79■■□□□ 1.72
DDR1-236ENST00000431373 SLIT3O75094 1523 aa25.77■■□□□ 1.72
DDR1-236ENST00000431373 PLCH1Q4KWH8 1693 aa25.77■■□□□ 1.72
DDR1-236ENST00000431373 COL14A1Q05707 1796 aaKnown RBP25.76■■□□□ 1.71
DDR1-236ENST00000431373 ZNF772Q68DY9 489 aaPredicted RBP25.75■■□□□ 1.71
DDR1-236ENST00000431373 NWD2Q9ULI1 1742 aa25.74■■□□□ 1.71
DDR1-236ENST00000431373 USP31Q70CQ4 1352 aa25.74■■□□□ 1.71
DDR1-236ENST00000431373 KIF7Q2M1P5 1343 aa25.74■■□□□ 1.71
DDR1-236ENST00000431373 NME9Q86XW9 330 aa25.74■■□□□ 1.71
DDR1-236ENST00000431373 KIF20BQ96Q89 1820 aa25.74■■□□□ 1.71
DDR1-236ENST00000431373 FNBP4Q8N3X1 1017 aaPredicted RBP25.73■■□□□ 1.71
DDR1-236ENST00000431373 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.73■■□□□ 1.71
DDR1-236ENST00000431373 GCP02774 474 aa25.72■■□□□ 1.71
DDR1-236ENST00000431373 SLIT2O94813 1529 aa25.72■■□□□ 1.71
DDR1-236ENST00000431373 ZRANB1Q9UGI0 708 aa25.71■■□□□ 1.71
DDR1-236ENST00000431373 KIAA0232Q92628 1395 aa25.7■■□□□ 1.71
DDR1-236ENST00000431373 FAM83GA6ND36 823 aa25.7■■□□□ 1.7
DDR1-236ENST00000431373 ZC3H6P61129 1189 aaKnown RBP25.7■■□□□ 1.7
DDR1-236ENST00000431373 USP21Q9UK80 565 aa25.7■■□□□ 1.7
DDR1-236ENST00000431373 POTEAQ6S8J7 498 aa25.69■■□□□ 1.7
DDR1-236ENST00000431373 CARD14Q9BXL6 1004 aa25.69■■□□□ 1.7
DDR1-236ENST00000431373 PRDM11Q9NQV5 511 aa25.69■■□□□ 1.7
DDR1-236ENST00000431373 NSD3Q9BZ95 1437 aa25.69■■□□□ 1.7
DDR1-236ENST00000431373 CPDO75976 1380 aa25.69■■□□□ 1.7
DDR1-236ENST00000431373 BCL9LQ86UU0 1499 aa25.68■■□□□ 1.7
DDR1-236ENST00000431373 KCNH5Q8NCM2 988 aa25.68■■□□□ 1.7
DDR1-236ENST00000431373 OVOS2A0A0J9YW53 1432 aa25.68■■□□□ 1.7
DDR1-236ENST00000431373 OVOS2Q6IE36 1432 aa25.68■■□□□ 1.7
DDR1-236ENST00000431373 CCDC7Q96M83 1385 aa25.68■■□□□ 1.7
DDR1-236ENST00000431373 NRAPQ86VF7 1730 aa25.67■■□□□ 1.7
DDR1-236ENST00000431373 NFAT5O94916 1531 aa25.66■■□□□ 1.7
DDR1-236ENST00000431373 PANK3Q9H999 370 aa25.65■■□□□ 1.7
DDR1-236ENST00000431373 WASHC2AQ641Q2 1341 aa25.64■■□□□ 1.7
DDR1-236ENST00000431373 CHRNA2Q15822 529 aa25.64■■□□□ 1.7
DDR1-236ENST00000431373 UNC5CLQ8IV45 518 aa25.64■■□□□ 1.7
DDR1-236ENST00000431373 LMO7Q8WWI1 1683 aa25.64■■□□□ 1.69
DDR1-236ENST00000431373 FYB1O15117 783 aa25.63■■□□□ 1.69
DDR1-236ENST00000431373 SOX12O15370 315 aa25.63■■□□□ 1.69
DDR1-236ENST00000431373 COG3Q96JB2 828 aa25.63■■□□□ 1.69
DDR1-236ENST00000431373 QTRT2Q9H974 415 aaKnown RBP25.63■■□□□ 1.69
DDR1-236ENST00000431373 LTN1O94822 1766 aa25.63■■□□□ 1.69
DDR1-236ENST00000431373 ATRNO75882 1429 aa25.63■■□□□ 1.69
DDR1-236ENST00000431373 BTG4Q9NY30 223 aa25.62■■□□□ 1.69
DDR1-236ENST00000431373 TRPC5Q9UL62 973 aaPredicted RBP25.62■■□□□ 1.69
DDR1-236ENST00000431373 COL18A1P39060 1754 aa25.61■■□□□ 1.69
DDR1-236ENST00000431373 ANKRD26Q9UPS8 1709 aa25.6■■□□□ 1.69
DDR1-236ENST00000431373 GGNBP2Q9H3C7 697 aa25.6■■□□□ 1.69
DDR1-236ENST00000431373 CGNL1Q0VF96 1302 aa25.6■■□□□ 1.69
DDR1-236ENST00000431373 ZBTB7CA1YPR0 619 aa25.59■■□□□ 1.69
DDR1-236ENST00000431373 CAMTA1Q9Y6Y1 1673 aa25.58■■□□□ 1.69
DDR1-236ENST00000431373 ARHGEF25Q86VW2 580 aa25.58■■□□□ 1.69
DDR1-236ENST00000431373 RGPD5Q99666 1765 aa25.58■■□□□ 1.69
DDR1-236ENST00000431373 AATKQ6ZMQ8 1374 aa25.57■■□□□ 1.68
DDR1-236ENST00000431373 RXRBP28702 533 aa25.57■■□□□ 1.68
DDR1-236ENST00000431373 RBM6P78332 1123 aaKnown RBP25.56■■□□□ 1.68
DDR1-236ENST00000431373 ABCC6O95255 1503 aa25.56■■□□□ 1.68
DDR1-236ENST00000431373 VPS72Q15906 364 aa25.55■■□□□ 1.68
DDR1-236ENST00000431373 GLI3P10071 1580 aa25.53■■□□□ 1.68
DDR1-236ENST00000431373 GJD4Q96KN9 370 aaPredicted RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms