RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 NBPF1Q3BBV0 1214 aa14.68□□□□□ -0.06
HMGN1P38-201ENST00000431116 NGDNQ8NEJ9 315 aaKnown RBP14.68□□□□□ -0.06
HMGN1P38-201ENST00000431116 NRAPQ86VF7 1730 aa14.68□□□□□ -0.06
HMGN1P38-201ENST00000431116 COL14A1Q05707 1796 aaKnown RBP14.68□□□□□ -0.06
HMGN1P38-201ENST00000431116 TRPM1Q7Z4N2 1603 aa14.67□□□□□ -0.06
HMGN1P38-201ENST00000431116 BRWD3Q6RI45 1802 aa14.67□□□□□ -0.06
HMGN1P38-201ENST00000431116 NUDT16Q96DE0 195 aaKnown RBP14.67□□□□□ -0.06
HMGN1P38-201ENST00000431116 CDK19Q9BWU1 502 aa14.66□□□□□ -0.06
HMGN1P38-201ENST00000431116 RNF216Q9NWF9 866 aaPredicted RBP14.66□□□□□ -0.06
HMGN1P38-201ENST00000431116 PHRF1Q9P1Y6 1649 aaKnown RBP14.66□□□□□ -0.06
HMGN1P38-201ENST00000431116 PAK3O75914 559 aaPredicted RBP14.65□□□□□ -0.06
HMGN1P38-201ENST00000431116 L3MBTL2Q969R5 705 aa14.65□□□□□ -0.06
HMGN1P38-201ENST00000431116 SIN3AQ96ST3 1273 aa14.64□□□□□ -0.07
HMGN1P38-201ENST00000431116 CENPJQ9HC77 1338 aaPredicted RBP14.64□□□□□ -0.07
HMGN1P38-201ENST00000431116 VPS72Q15906 364 aa14.63□□□□□ -0.07
HMGN1P38-201ENST00000431116 POLR3AO14802 1390 aaPredicted RBP14.62□□□□□ -0.07
HMGN1P38-201ENST00000431116 FAM83GA6ND36 823 aa14.62□□□□□ -0.07
HMGN1P38-201ENST00000431116 CCDC9Q9Y3X0 531 aaKnown RBP14.62□□□□□ -0.07
HMGN1P38-201ENST00000431116 NEUROD1Q13562 356 aa14.61□□□□□ -0.07
HMGN1P38-201ENST00000431116 CCDC61Q9Y6R9 512 aa14.61□□□□□ -0.07
HMGN1P38-201ENST00000431116 ACEP12821 1306 aa14.61□□□□□ -0.07
HMGN1P38-201ENST00000431116 PPIP5K1Q6PFW1 1433 aa14.6□□□□□ -0.07
HMGN1P38-201ENST00000431116 SRPK2P78362 688 aaKnown RBP14.6□□□□□ -0.07
HMGN1P38-201ENST00000431116 NRKQ7Z2Y5 1582 aa14.6□□□□□ -0.07
HMGN1P38-201ENST00000431116 BTG4Q9NY30 223 aa14.59□□□□□ -0.07
HMGN1P38-201ENST00000431116 ROCK2O75116 1388 aaKnown RBP14.59□□□□□ -0.07
HMGN1P38-201ENST00000431116 NBPF8Q3BBV2 869 aa14.58□□□□□ -0.08
HMGN1P38-201ENST00000431116 SEPT12Q8IYM1 358 aa14.58□□□□□ -0.08
HMGN1P38-201ENST00000431116 PRDM11Q9NQV5 511 aa14.58□□□□□ -0.08
HMGN1P38-201ENST00000431116 PLEKHG3A1L390 1219 aa14.57□□□□□ -0.08
HMGN1P38-201ENST00000431116 NUTM2GQ5VZR2 741 aa14.57□□□□□ -0.08
HMGN1P38-201ENST00000431116 CABP2Q9NPB3 220 aa14.57□□□□□ -0.08
HMGN1P38-201ENST00000431116 KIAA0232Q92628 1395 aa14.57□□□□□ -0.08
HMGN1P38-201ENST00000431116 A0A0G2JS52 829 aa14.56□□□□□ -0.08
HMGN1P38-201ENST00000431116 MYT1Q01538 1121 aa14.56□□□□□ -0.08
HMGN1P38-201ENST00000431116 BLMP54132 1417 aaPredicted RBP14.55□□□□□ -0.08
HMGN1P38-201ENST00000431116 THSD7AQ9UPZ6 1657 aa14.55□□□□□ -0.08
HMGN1P38-201ENST00000431116 ONECUT3O60422 494 aaPredicted RBP14.54□□□□□ -0.08
HMGN1P38-201ENST00000431116 FAM98CQ17RN3 349 aaKnown RBP14.54□□□□□ -0.08
HMGN1P38-201ENST00000431116 CCDC125Q86Z20 511 aa14.54□□□□□ -0.08
HMGN1P38-201ENST00000431116 ABTB2Q8N961 1025 aa14.54□□□□□ -0.08
HMGN1P38-201ENST00000431116 AKAP12Q02952 1782 aa14.53□□□□□ -0.08
HMGN1P38-201ENST00000431116 SPATA31A5Q5VU36 1347 aa14.53□□□□□ -0.08
HMGN1P38-201ENST00000431116 EVC2Q86UK5 1308 aa14.53□□□□□ -0.08
HMGN1P38-201ENST00000431116 SPATA31A7Q8IWB4 1347 aa14.53□□□□□ -0.08
HMGN1P38-201ENST00000431116 CHRNA2Q15822 529 aa14.53□□□□□ -0.08
HMGN1P38-201ENST00000431116 KRT27Q7Z3Y8 459 aa14.53□□□□□ -0.08
HMGN1P38-201ENST00000431116 EP400Q96L91 3159 aa14.53□□□□□ -0.08
HMGN1P38-201ENST00000431116 LMO7Q8WWI1 1683 aa14.52□□□□□ -0.08
HMGN1P38-201ENST00000431116 USP6P35125 1406 aa14.52□□□□□ -0.08
HMGN1P38-201ENST00000431116 USP19O94966 1318 aa14.52□□□□□ -0.08
HMGN1P38-201ENST00000431116 ZC3H6P61129 1189 aaKnown RBP14.52□□□□□ -0.09
HMGN1P38-201ENST00000431116 PIK3C2AO00443 1686 aa14.52□□□□□ -0.09
HMGN1P38-201ENST00000431116 BRD4O60885 1362 aaPredicted RBP14.51□□□□□ -0.09
HMGN1P38-201ENST00000431116 STRN4Q9NRL3 753 aa14.51□□□□□ -0.09
HMGN1P38-201ENST00000431116 CABP1Q9NZU7 370 aa14.51□□□□□ -0.09
HMGN1P38-201ENST00000431116 TONSLQ96HA7 1378 aa14.5□□□□□ -0.09
HMGN1P38-201ENST00000431116 RGPD1P0DJD0 1748 aa14.5□□□□□ -0.09
HMGN1P38-201ENST00000431116 NPM3O75607 178 aaKnown RBP14.5□□□□□ -0.09
HMGN1P38-201ENST00000431116 SSH2Q76I76 1423 aa14.49□□□□□ -0.09
HMGN1P38-201ENST00000431116 CPDO75976 1380 aa14.49□□□□□ -0.09
HMGN1P38-201ENST00000431116 CAMTA1Q9Y6Y1 1673 aa14.49□□□□□ -0.09
HMGN1P38-201ENST00000431116 NLRP13Q86W25 1043 aa14.49□□□□□ -0.09
HMGN1P38-201ENST00000431116 SLIT3O75094 1523 aa14.49□□□□□ -0.09
HMGN1P38-201ENST00000431116 SPATA31A1Q5TZJ5 1347 aa14.48□□□□□ -0.09
HMGN1P38-201ENST00000431116 KCNA4P22459 653 aa14.48□□□□□ -0.09
HMGN1P38-201ENST00000431116 SF3B2Q13435 895 aaKnown RBP14.48□□□□□ -0.09
HMGN1P38-201ENST00000431116 MON2Q7Z3U7 1717 aa14.48□□□□□ -0.09
HMGN1P38-201ENST00000431116 ZRANB1Q9UGI0 708 aa14.47□□□□□ -0.09
HMGN1P38-201ENST00000431116 SBNO2Q9Y2G9 1366 aa14.47□□□□□ -0.09
HMGN1P38-201ENST00000431116 TNS1Q9HBL0 1735 aaKnown RBP14.46□□□□□ -0.09
HMGN1P38-201ENST00000431116 GCP02774 474 aa14.46□□□□□ -0.09
HMGN1P38-201ENST00000431116 NLRP6P59044 892 aa14.46□□□□□ -0.09
HMGN1P38-201ENST00000431116 DEFB132Q7Z7B7 95 aa14.46□□□□□ -0.09
HMGN1P38-201ENST00000431116 CARD11Q9BXL7 1154 aa14.46□□□□□ -0.09
HMGN1P38-201ENST00000431116 USP35Q9P2H5 1018 aa14.46□□□□□ -0.09
HMGN1P38-201ENST00000431116 COL5A2P05997 1499 aaPredicted RBP14.45□□□□□ -0.1
HMGN1P38-201ENST00000431116 EVA1CP58658 441 aa14.45□□□□□ -0.1
HMGN1P38-201ENST00000431116 TRIM26Q12899 539 aaPredicted RBP14.45□□□□□ -0.1
HMGN1P38-201ENST00000431116 ZBTB7CA1YPR0 619 aa14.44□□□□□ -0.1
HMGN1P38-201ENST00000431116 FAM182BQ5T319 152 aa14.44□□□□□ -0.1
HMGN1P38-201ENST00000431116 COL18A1P39060 1754 aa14.44□□□□□ -0.1
HMGN1P38-201ENST00000431116 LARP1Q6PKG0 1096 aaKnown RBP14.43□□□□□ -0.1
HMGN1P38-201ENST00000431116 PARP4Q9UKK3 1724 aaKnown RBP14.43□□□□□ -0.1
HMGN1P38-201ENST00000431116 WNK3Q9BYP7 1800 aa14.43□□□□□ -0.1
HMGN1P38-201ENST00000431116 RGPD5Q99666 1765 aa14.42□□□□□ -0.1
HMGN1P38-201ENST00000431116 CPSF1Q10570 1443 aaKnown RBP14.42□□□□□ -0.1
HMGN1P38-201ENST00000431116 KTN1Q86UP2 1357 aaKnown RBP14.42□□□□□ -0.1
HMGN1P38-201ENST00000431116 TTC21BQ7Z4L5 1316 aa14.41□□□□□ -0.1
HMGN1P38-201ENST00000431116 BAG6P46379 1132 aa14.41□□□□□ -0.1
HMGN1P38-201ENST00000431116 BARGINQ6ZT62 677 aa14.41□□□□□ -0.1
HMGN1P38-201ENST00000431116 ZNF692Q9BU19 519 aaPredicted RBP14.41□□□□□ -0.1
HMGN1P38-201ENST00000431116 AATKQ6ZMQ8 1374 aa14.41□□□□□ -0.1
HMGN1P38-201ENST00000431116 USP54Q70EL1 1684 aa14.41□□□□□ -0.1
HMGN1P38-201ENST00000431116 CRB1P82279 1406 aa14.41□□□□□ -0.1
HMGN1P38-201ENST00000431116 TTC21AQ8NDW8 1320 aa14.41□□□□□ -0.1
HMGN1P38-201ENST00000431116 TCP11L2Q8N4U5 519 aa14.4□□□□□ -0.1
HMGN1P38-201ENST00000431116 LRRC37A3O60309 1634 aa14.4□□□□□ -0.1
HMGN1P38-201ENST00000431116 CD163L1Q9NR16 1453 aa14.39□□□□□ -0.11
HMGN1P38-201ENST00000431116 SOX12O15370 315 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms