RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 CDK19Q9BWU1 502 aa23.63■■□□□ 1.37
PTPRA-206ENST00000430705 POLR3AO14802 1390 aaPredicted RBP23.63■■□□□ 1.37
PTPRA-206ENST00000430705 VPS72Q15906 364 aa23.62■■□□□ 1.37
PTPRA-206ENST00000430705 NGDNQ8NEJ9 315 aaKnown RBP23.61■■□□□ 1.37
PTPRA-206ENST00000430705 L3MBTL2Q969R5 705 aa23.6■■□□□ 1.37
PTPRA-206ENST00000430705 SIN3AQ96ST3 1273 aa23.6■■□□□ 1.37
PTPRA-206ENST00000430705 NRKQ7Z2Y5 1582 aa23.58■■□□□ 1.37
PTPRA-206ENST00000430705 ACEP12821 1306 aa23.56■■□□□ 1.36
PTPRA-206ENST00000430705 CENPJQ9HC77 1338 aaPredicted RBP23.56■■□□□ 1.36
PTPRA-206ENST00000430705 PAK3O75914 559 aaPredicted RBP23.55■■□□□ 1.36
PTPRA-206ENST00000430705 SRCAPQ6ZRS2 3230 aa23.55■■□□□ 1.36
PTPRA-206ENST00000430705 PLEKHG3A1L390 1219 aa23.54■■□□□ 1.36
PTPRA-206ENST00000430705 ONECUT3O60422 494 aaPredicted RBP23.54■■□□□ 1.36
PTPRA-206ENST00000430705 SEPT12Q8IYM1 358 aa23.54■■□□□ 1.36
PTPRA-206ENST00000430705 BTG4Q9NY30 223 aa23.54■■□□□ 1.36
PTPRA-206ENST00000430705 THSD7AQ9UPZ6 1657 aa23.54■■□□□ 1.36
PTPRA-206ENST00000430705 PPIP5K1Q6PFW1 1433 aa23.53■■□□□ 1.36
PTPRA-206ENST00000430705 CCDC61Q9Y6R9 512 aa23.53■■□□□ 1.36
PTPRA-206ENST00000430705 NBPF8Q3BBV2 869 aa23.51■■□□□ 1.35
PTPRA-206ENST00000430705 KIAA0232Q92628 1395 aa23.51■■□□□ 1.35
PTPRA-206ENST00000430705 CCDC9Q9Y3X0 531 aaKnown RBP23.5■■□□□ 1.35
PTPRA-206ENST00000430705 LMO7Q8WWI1 1683 aa23.5■■□□□ 1.35
PTPRA-206ENST00000430705 NUTM2GQ5VZR2 741 aa23.49■■□□□ 1.35
PTPRA-206ENST00000430705 CABP2Q9NPB3 220 aa23.49■■□□□ 1.35
PTPRA-206ENST00000430705 BLMP54132 1417 aaPredicted RBP23.49■■□□□ 1.35
PTPRA-206ENST00000430705 NEUROD1Q13562 356 aa23.47■■□□□ 1.35
PTPRA-206ENST00000430705 PRDM11Q9NQV5 511 aa23.47■■□□□ 1.35
PTPRA-206ENST00000430705 USP19O94966 1318 aa23.47■■□□□ 1.35
PTPRA-206ENST00000430705 SPATA31A5Q5VU36 1347 aa23.47■■□□□ 1.35
PTPRA-206ENST00000430705 SPATA31A7Q8IWB4 1347 aa23.47■■□□□ 1.35
PTPRA-206ENST00000430705 SRPK2P78362 688 aaKnown RBP23.46■■□□□ 1.35
PTPRA-206ENST00000430705 FAM98CQ17RN3 349 aaKnown RBP23.46■■□□□ 1.35
PTPRA-206ENST00000430705 PIK3C2AO00443 1686 aa23.45■■□□□ 1.34
PTPRA-206ENST00000430705 CHRNA2Q15822 529 aa23.45■■□□□ 1.34
PTPRA-206ENST00000430705 ROCK2O75116 1388 aaKnown RBP23.44■■□□□ 1.34
PTPRA-206ENST00000430705 CCDC125Q86Z20 511 aa23.44■■□□□ 1.34
PTPRA-206ENST00000430705 CAMTA1Q9Y6Y1 1673 aa23.44■■□□□ 1.34
PTPRA-206ENST00000430705 USP6P35125 1406 aa23.43■■□□□ 1.34
PTPRA-206ENST00000430705 SSH2Q76I76 1423 aa23.43■■□□□ 1.34
PTPRA-206ENST00000430705 KRT27Q7Z3Y8 459 aa23.43■■□□□ 1.34
PTPRA-206ENST00000430705 AKAP12Q02952 1782 aa23.42■■□□□ 1.34
PTPRA-206ENST00000430705 ZC3H6P61129 1189 aaKnown RBP23.42■■□□□ 1.34
PTPRA-206ENST00000430705 SLIT3O75094 1523 aa23.42■■□□□ 1.34
PTPRA-206ENST00000430705 CPDO75976 1380 aa23.4■■□□□ 1.34
PTPRA-206ENST00000430705 ABTB2Q8N961 1025 aa23.4■■□□□ 1.34
PTPRA-206ENST00000430705 TNS1Q9HBL0 1735 aaKnown RBP23.39■■□□□ 1.34
PTPRA-206ENST00000430705 SPATA31A1Q5TZJ5 1347 aa23.39■■□□□ 1.34
PTPRA-206ENST00000430705 DEFB132Q7Z7B7 95 aa23.39■■□□□ 1.33
PTPRA-206ENST00000430705 CABP1Q9NZU7 370 aa23.39■■□□□ 1.33
PTPRA-206ENST00000430705 RGPD1P0DJD0 1748 aa23.38■■□□□ 1.33
PTPRA-206ENST00000430705 BRD4O60885 1362 aaPredicted RBP23.38■■□□□ 1.33
PTPRA-206ENST00000430705 A0A0G2JS52 829 aa23.36■■□□□ 1.33
PTPRA-206ENST00000430705 MYT1Q01538 1121 aa23.36■■□□□ 1.33
PTPRA-206ENST00000430705 EVC2Q86UK5 1308 aa23.35■■□□□ 1.33
PTPRA-206ENST00000430705 FAM182BQ5T319 152 aa23.35■■□□□ 1.33
PTPRA-206ENST00000430705 STRN4Q9NRL3 753 aa23.35■■□□□ 1.33
PTPRA-206ENST00000430705 COL18A1P39060 1754 aa23.35■■□□□ 1.33
PTPRA-206ENST00000430705 MON2Q7Z3U7 1717 aa23.34■■□□□ 1.33
PTPRA-206ENST00000430705 COL5A2P05997 1499 aaPredicted RBP23.34■■□□□ 1.33
PTPRA-206ENST00000430705 GCP02774 474 aa23.33■■□□□ 1.33
PTPRA-206ENST00000430705 SBNO2Q9Y2G9 1366 aa23.32■■□□□ 1.32
PTPRA-206ENST00000430705 CPSF1Q10570 1443 aaKnown RBP23.32■■□□□ 1.32
PTPRA-206ENST00000430705 LARP1Q6PKG0 1096 aaKnown RBP23.31■■□□□ 1.32
PTPRA-206ENST00000430705 NLRP13Q86W25 1043 aa23.31■■□□□ 1.32
PTPRA-206ENST00000430705 ZRANB1Q9UGI0 708 aa23.31■■□□□ 1.32
PTPRA-206ENST00000430705 PARP4Q9UKK3 1724 aaKnown RBP23.3■■□□□ 1.32
PTPRA-206ENST00000430705 CD163L1Q9NR16 1453 aa23.3■■□□□ 1.32
PTPRA-206ENST00000430705 WNK3Q9BYP7 1800 aa23.28■■□□□ 1.32
PTPRA-206ENST00000430705 USP54Q70EL1 1684 aa23.28■■□□□ 1.32
PTPRA-206ENST00000430705 NFAT5O94916 1531 aa23.28■■□□□ 1.32
PTPRA-206ENST00000430705 DISP2A7MBM2 1401 aa23.27■■□□□ 1.32
PTPRA-206ENST00000430705 NLRP6P59044 892 aa23.26■■□□□ 1.31
PTPRA-206ENST00000430705 SF3B2Q13435 895 aaKnown RBP23.26■■□□□ 1.31
PTPRA-206ENST00000430705 BARGINQ6ZT62 677 aa23.26■■□□□ 1.31
PTPRA-206ENST00000430705 USP35Q9P2H5 1018 aa23.26■■□□□ 1.31
PTPRA-206ENST00000430705 TTC21BQ7Z4L5 1316 aa23.26■■□□□ 1.31
PTPRA-206ENST00000430705 TONSLQ96HA7 1378 aa23.26■■□□□ 1.31
PTPRA-206ENST00000430705 LRRC37A3O60309 1634 aa23.25■■□□□ 1.31
PTPRA-206ENST00000430705 AATKQ6ZMQ8 1374 aa23.25■■□□□ 1.31
PTPRA-206ENST00000430705 RGPD5Q99666 1765 aa23.24■■□□□ 1.31
PTPRA-206ENST00000430705 CARD11Q9BXL7 1154 aa23.24■■□□□ 1.31
PTPRA-206ENST00000430705 PEAK1Q9H792 1746 aa23.23■■□□□ 1.31
PTPRA-206ENST00000430705 EVA1CP58658 441 aa23.23■■□□□ 1.31
PTPRA-206ENST00000430705 CRB1P82279 1406 aa23.23■■□□□ 1.31
PTPRA-206ENST00000430705 BAG6P46379 1132 aa23.21■■□□□ 1.31
PTPRA-206ENST00000430705 TCP11L2Q8N4U5 519 aa23.21■■□□□ 1.31
PTPRA-206ENST00000430705 KTN1Q86UP2 1357 aaKnown RBP23.21■■□□□ 1.31
PTPRA-206ENST00000430705 RREB1Q92766 1687 aa23.2■■□□□ 1.3
PTPRA-206ENST00000430705 TTC21AQ8NDW8 1320 aa23.2■■□□□ 1.3
PTPRA-206ENST00000430705 EN1Q05925 392 aaPredicted RBP23.2■■□□□ 1.3
PTPRA-206ENST00000430705 LRP5O75197 1615 aa23.19■■□□□ 1.3
PTPRA-206ENST00000430705 ZBTB7CA1YPR0 619 aa23.19■■□□□ 1.3
PTPRA-206ENST00000430705 ZNF692Q9BU19 519 aaPredicted RBP23.19■■□□□ 1.3
PTPRA-206ENST00000430705 AXIN2Q9Y2T1 843 aa23.19■■□□□ 1.3
PTPRA-206ENST00000430705 TRIM26Q12899 539 aaPredicted RBP23.17■■□□□ 1.3
PTPRA-206ENST00000430705 ARHGEF25Q86VW2 580 aa23.17■■□□□ 1.3
PTPRA-206ENST00000430705 THRAP3Q9Y2W1 955 aaKnown RBP23.17■■□□□ 1.3
PTPRA-206ENST00000430705 ABCC6O95255 1503 aa23.16■■□□□ 1.3
PTPRA-206ENST00000430705 NUP188Q5SRE5 1749 aa23.16■■□□□ 1.3
PTPRA-206ENST00000430705 TRIM37O94972 964 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms