RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 LMOD2Q6P5Q4 547 aa27.96■■■□□ 2.07
CSNK1E-207ENST00000430335 HDGFL2Q7Z4V5 671 aaPredicted RBP27.96■■■□□ 2.07
CSNK1E-207ENST00000430335 LRP6O75581 1613 aa27.96■■■□□ 2.07
CSNK1E-207ENST00000430335 KTN1Q86UP2 1357 aaKnown RBP27.95■■■□□ 2.06
CSNK1E-207ENST00000430335 AKAP12Q02952 1782 aa27.94■■■□□ 2.06
CSNK1E-207ENST00000430335 NUTM2BA6NNL0 878 aaPredicted RBP27.94■■■□□ 2.06
CSNK1E-207ENST00000430335 NUTM2EB1AL46 878 aaPredicted RBP27.94■■■□□ 2.06
CSNK1E-207ENST00000430335 NUTM2AQ8IVF1 878 aaPredicted RBP27.94■■■□□ 2.06
CSNK1E-207ENST00000430335 A0A1W2PP64 1363 aa27.92■■■□□ 2.06
CSNK1E-207ENST00000430335 TTC21BQ7Z4L5 1316 aa27.92■■■□□ 2.06
CSNK1E-207ENST00000430335 ANKRD36BQ8N2N9 1353 aa27.91■■■□□ 2.06
CSNK1E-207ENST00000430335 TTC21AQ8NDW8 1320 aa27.91■■■□□ 2.06
CSNK1E-207ENST00000430335 C11orf95C9JLR9 678 aaPredicted RBP27.9■■■□□ 2.06
CSNK1E-207ENST00000430335 ABTB2Q8N961 1025 aa27.9■■■□□ 2.06
CSNK1E-207ENST00000430335 MON2Q7Z3U7 1717 aa27.89■■■□□ 2.06
CSNK1E-207ENST00000430335 EDC4Q6P2E9 1401 aaKnown RBP27.88■■■□□ 2.05
CSNK1E-207ENST00000430335 NRKQ7Z2Y5 1582 aa27.87■■■□□ 2.05
CSNK1E-207ENST00000430335 MEX3CQ5U5Q3 659 aaKnown RBP27.87■■■□□ 2.05
CSNK1E-207ENST00000430335 CABLES1Q8TDN4 633 aa27.86■■■□□ 2.05
CSNK1E-207ENST00000430335 MYOM1P52179 1685 aa27.85■■■□□ 2.05
CSNK1E-207ENST00000430335 NLRP13Q86W25 1043 aa27.85■■■□□ 2.05
CSNK1E-207ENST00000430335 POLR3GLQ9BT43 218 aa27.85■■■□□ 2.05
CSNK1E-207ENST00000430335 ADAMTS2O95450 1211 aa27.84■■■□□ 2.05
CSNK1E-207ENST00000430335 USP19O94966 1318 aa27.84■■■□□ 2.05
CSNK1E-207ENST00000430335 HAP1P54257 671 aaPredicted RBP27.83■■■□□ 2.05
CSNK1E-207ENST00000430335 NUTM2GQ5VZR2 741 aa27.83■■■□□ 2.05
CSNK1E-207ENST00000430335 KIF7Q2M1P5 1343 aa27.83■■■□□ 2.05
CSNK1E-207ENST00000430335 NLRP6P59044 892 aa27.82■■■□□ 2.04
CSNK1E-207ENST00000430335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.81■■■□□ 2.04
CSNK1E-207ENST00000430335 PHF23Q9BUL5 403 aaPredicted RBP27.81■■■□□ 2.04
CSNK1E-207ENST00000430335 PIK3C2AO00443 1686 aa27.81■■■□□ 2.04
CSNK1E-207ENST00000430335 ABCA3Q99758 1704 aa27.81■■■□□ 2.04
CSNK1E-207ENST00000430335 PLEKHG5O94827 1062 aa27.8■■■□□ 2.04
CSNK1E-207ENST00000430335 CRYBG1Q9Y4K1 1723 aa27.8■■■□□ 2.04
CSNK1E-207ENST00000430335 USP31Q70CQ4 1352 aa27.79■■■□□ 2.04
CSNK1E-207ENST00000430335 C8orf37Q96NL8 207 aa27.78■■■□□ 2.04
CSNK1E-207ENST00000430335 CCDC7Q96M83 1385 aa27.76■■■□□ 2.03
CSNK1E-207ENST00000430335 NME9Q86XW9 330 aa27.76■■■□□ 2.03
CSNK1E-207ENST00000430335 NGLY1Q96IV0 654 aa27.76■■■□□ 2.03
CSNK1E-207ENST00000430335 CARD14Q9BXL6 1004 aa27.76■■■□□ 2.03
CSNK1E-207ENST00000430335 PHRF1Q9P1Y6 1649 aaKnown RBP27.75■■■□□ 2.03
CSNK1E-207ENST00000430335 GCP02774 474 aa27.75■■■□□ 2.03
CSNK1E-207ENST00000430335 RGS17Q9UGC6 210 aaPredicted RBP27.75■■■□□ 2.03
CSNK1E-207ENST00000430335 SLIT3O75094 1523 aa27.75■■■□□ 2.03
CSNK1E-207ENST00000430335 WASHC2AQ641Q2 1341 aa27.74■■■□□ 2.03
CSNK1E-207ENST00000430335 FNBP4Q8N3X1 1017 aaPredicted RBP27.74■■■□□ 2.03
CSNK1E-207ENST00000430335 MARF1Q9Y4F3 1742 aaKnown RBP27.74■■■□□ 2.03
CSNK1E-207ENST00000430335 AFF2P51816 1311 aa27.73■■■□□ 2.03
CSNK1E-207ENST00000430335 NSD3Q9BZ95 1437 aa27.72■■■□□ 2.03
CSNK1E-207ENST00000430335 USP54Q70EL1 1684 aa27.72■■■□□ 2.03
CSNK1E-207ENST00000430335 ZNF772Q68DY9 489 aaPredicted RBP27.71■■■□□ 2.03
CSNK1E-207ENST00000430335 KCNH5Q8NCM2 988 aa27.71■■■□□ 2.03
CSNK1E-207ENST00000430335 PANK3Q9H999 370 aa27.71■■■□□ 2.03
CSNK1E-207ENST00000430335 ZRANB1Q9UGI0 708 aa27.71■■■□□ 2.03
CSNK1E-207ENST00000430335 OVOS2A0A0J9YW53 1432 aa27.7■■■□□ 2.03
CSNK1E-207ENST00000430335 OVOS2Q6IE36 1432 aa27.7■■■□□ 2.03
CSNK1E-207ENST00000430335 FAM83GA6ND36 823 aa27.7■■■□□ 2.02
CSNK1E-207ENST00000430335 CPDO75976 1380 aa27.7■■■□□ 2.02
CSNK1E-207ENST00000430335 SLIT2O94813 1529 aa27.69■■■□□ 2.02
CSNK1E-207ENST00000430335 FYB1O15117 783 aa27.69■■■□□ 2.02
CSNK1E-207ENST00000430335 KIAA0232Q92628 1395 aa27.69■■■□□ 2.02
CSNK1E-207ENST00000430335 ZC3H6P61129 1189 aaKnown RBP27.67■■■□□ 2.02
CSNK1E-207ENST00000430335 PRDM11Q9NQV5 511 aa27.67■■■□□ 2.02
CSNK1E-207ENST00000430335 COG3Q96JB2 828 aa27.66■■■□□ 2.02
CSNK1E-207ENST00000430335 USP21Q9UK80 565 aa27.66■■■□□ 2.02
CSNK1E-207ENST00000430335 CGNL1Q0VF96 1302 aa27.65■■■□□ 2.02
CSNK1E-207ENST00000430335 BCL9LQ86UU0 1499 aa27.64■■■□□ 2.02
CSNK1E-207ENST00000430335 COL14A1Q05707 1796 aaKnown RBP27.63■■■□□ 2.01
CSNK1E-207ENST00000430335 NFAT5O94916 1531 aa27.62■■■□□ 2.01
CSNK1E-207ENST00000430335 POTEAQ6S8J7 498 aa27.62■■■□□ 2.01
CSNK1E-207ENST00000430335 UNC5CLQ8IV45 518 aa27.62■■■□□ 2.01
CSNK1E-207ENST00000430335 GGNBP2Q9H3C7 697 aa27.62■■■□□ 2.01
CSNK1E-207ENST00000430335 ARHGEF25Q86VW2 580 aa27.61■■■□□ 2.01
CSNK1E-207ENST00000430335 CHRNA2Q15822 529 aa27.6■■■□□ 2.01
CSNK1E-207ENST00000430335 NWD2Q9ULI1 1742 aa27.6■■■□□ 2.01
CSNK1E-207ENST00000430335 SOX12O15370 315 aa27.59■■■□□ 2.01
CSNK1E-207ENST00000430335 BTG4Q9NY30 223 aa27.59■■■□□ 2.01
CSNK1E-207ENST00000430335 TRPC5Q9UL62 973 aaPredicted RBP27.59■■■□□ 2.01
CSNK1E-207ENST00000430335 AATKQ6ZMQ8 1374 aa27.59■■■□□ 2.01
CSNK1E-207ENST00000430335 PLCH1Q4KWH8 1693 aa27.59■■■□□ 2.01
CSNK1E-207ENST00000430335 QTRT2Q9H974 415 aaKnown RBP27.58■■■□□ 2.01
CSNK1E-207ENST00000430335 KNSTRNQ9Y448 316 aa27.58■■■□□ 2.01
CSNK1E-207ENST00000430335 ATRNO75882 1429 aa27.58■■■□□ 2
CSNK1E-207ENST00000430335 KIF20BQ96Q89 1820 aa27.57■■■□□ 2
CSNK1E-207ENST00000430335 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.57■■■□□ 2
CSNK1E-207ENST00000430335 PER1O15534 1290 aaPredicted RBP27.56■■■□□ 2
CSNK1E-207ENST00000430335 NSD2O96028 1365 aa27.56■■■□□ 2
CSNK1E-207ENST00000430335 LMO7Q8WWI1 1683 aa27.55■■■□□ 2
CSNK1E-207ENST00000430335 VPS72Q15906 364 aa27.53■■■□□ 2
CSNK1E-207ENST00000430335 CAMTA1Q9Y6Y1 1673 aa27.52■■■□□ 2
CSNK1E-207ENST00000430335 ABCC6O95255 1503 aa27.52■■■□□ 2
CSNK1E-207ENST00000430335 ZBTB7CA1YPR0 619 aa27.52■■■□□ 2
CSNK1E-207ENST00000430335 AMER1Q5JTC6 1135 aaPredicted RBP27.52■■■□□ 2
CSNK1E-207ENST00000430335 NRAPQ86VF7 1730 aa27.52■■■□□ 2
CSNK1E-207ENST00000430335 RXRBP28702 533 aa27.51■■□□□ 1.99
CSNK1E-207ENST00000430335 RBM6P78332 1123 aaKnown RBP27.51■■□□□ 1.99
CSNK1E-207ENST00000430335 COL18A1P39060 1754 aa27.5■■□□□ 1.99
CSNK1E-207ENST00000430335 GJD4Q96KN9 370 aaPredicted RBP27.49■■□□□ 1.99
CSNK1E-207ENST00000430335 AXIN2Q9Y2T1 843 aa27.49■■□□□ 1.99
CSNK1E-207ENST00000430335 MAP3K19Q56UN5 1328 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms