RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 UHRF1BP1LA0JNW5 1464 aa7.16□□□□□ -1.26
UBR3-204ENST00000430321 ABCC10Q5T3U5 1492 aa7.16□□□□□ -1.26
UBR3-204ENST00000430321 DHX29Q7Z478 1369 aaKnown RBP7.16□□□□□ -1.26
UBR3-204ENST00000430321 EXOC5O00471 708 aa7.15□□□□□ -1.26
UBR3-204ENST00000430321 CCT4P50991 539 aaKnown RBP7.15□□□□□ -1.26
UBR3-204ENST00000430321 PRAM1Q96QH2 718 aa7.15□□□□□ -1.26
UBR3-204ENST00000430321 CDK19Q9BWU1 502 aa7.15□□□□□ -1.26
UBR3-204ENST00000430321 TNIP1Q15025 636 aa7.15□□□□□ -1.26
UBR3-204ENST00000430321 TTC21BQ7Z4L5 1316 aa7.15□□□□□ -1.26
UBR3-204ENST00000430321 ST5P78524 1137 aa7.15□□□□□ -1.26
UBR3-204ENST00000430321 DNAJC2Q99543 621 aaKnown RBP7.15□□□□□ -1.26
UBR3-204ENST00000430321 PHF8Q9UPP1 1060 aa7.15□□□□□ -1.26
UBR3-204ENST00000430321 TTC21AQ8NDW8 1320 aa7.15□□□□□ -1.27
UBR3-204ENST00000430321 ZNF530Q6P9A1 599 aaPredicted RBP7.15□□□□□ -1.27
UBR3-204ENST00000430321 CNNM1Q9NRU3 951 aa7.15□□□□□ -1.27
UBR3-204ENST00000430321 IPO7O95373 1038 aaKnown RBP7.14□□□□□ -1.27
UBR3-204ENST00000430321 B4DLN1 442 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 MRPL12P52815 198 aaKnown RBP7.14□□□□□ -1.27
UBR3-204ENST00000430321 WASHC4Q2M389 1173 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 TXLNBQ8N3L3 684 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 AK7Q96M32 723 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 MPHOSPH8Q99549 860 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 CCDC61Q9Y6R9 512 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 KIF7Q2M1P5 1343 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 TIAM1Q13009 1591 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 NF2P35240 595 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 MTHFSP49914 203 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 CCDC146Q8IYE0 955 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 AKAP2Q9Y2D5 859 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 DUOX2Q9NRD8 1548 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 IKQ13123 557 aaPredicted RBP7.14□□□□□ -1.27
UBR3-204ENST00000430321 CCDC27Q2M243 656 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 TTC39AQ5SRH9 613 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 CNTROBQ8N137 903 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 TAOK2Q9UL54 1235 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 BIVM-ERCC5R4GMW8 1640 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 RAD21O60216 631 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 TXLNAP40222 546 aa7.14□□□□□ -1.27
UBR3-204ENST00000430321 CENPQQ7L2Z9 268 aaPredicted RBP7.13□□□□□ -1.27
UBR3-204ENST00000430321 BRD4O60885 1362 aaPredicted RBP7.13□□□□□ -1.27
UBR3-204ENST00000430321 SUPT16HQ9Y5B9 1047 aaKnown RBP7.13□□□□□ -1.27
UBR3-204ENST00000430321 WDR62O43379 1518 aa7.13□□□□□ -1.27
UBR3-204ENST00000430321 CAMSAP2Q08AD1 1489 aa7.13□□□□□ -1.27
UBR3-204ENST00000430321 ASXL2Q76L83 1435 aa7.13□□□□□ -1.27
UBR3-204ENST00000430321 APBB1O00213 710 aa7.13□□□□□ -1.27
UBR3-204ENST00000430321 MPHOSPH10O00566 681 aaKnown RBP7.13□□□□□ -1.27
UBR3-204ENST00000430321 RPGRQ92834 1020 aaKnown RBP7.13□□□□□ -1.27
UBR3-204ENST00000430321 HOOK2Q96ED9 719 aa7.13□□□□□ -1.27
UBR3-204ENST00000430321 HDAC9Q9UKV0 1011 aa7.13□□□□□ -1.27
UBR3-204ENST00000430321 PLCH2O75038 1416 aa7.13□□□□□ -1.27
UBR3-204ENST00000430321 MYO1BO43795 1136 aa7.13□□□□□ -1.27
UBR3-204ENST00000430321 LRRC59Q96AG4 307 aaKnown RBP7.13□□□□□ -1.27
UBR3-204ENST00000430321 LDHCP07864 332 aa7.12□□□□□ -1.27
UBR3-204ENST00000430321 CLASRPQ8N2M8 674 aaKnown RBP7.12□□□□□ -1.27
UBR3-204ENST00000430321 URB2Q14146 1524 aaKnown RBP7.12□□□□□ -1.27
UBR3-204ENST00000430321 TMEM132AQ24JP5 1023 aa7.12□□□□□ -1.27
UBR3-204ENST00000430321 INTS3Q68E01 1043 aaKnown RBP7.12□□□□□ -1.27
UBR3-204ENST00000430321 MIER1Q8N108 512 aa7.12□□□□□ -1.27
UBR3-204ENST00000430321 RAPGEF3O95398 923 aa7.12□□□□□ -1.27
UBR3-204ENST00000430321 PLCB2Q00722 1185 aa7.12□□□□□ -1.27
UBR3-204ENST00000430321 CCDC178Q5BJE1 867 aa7.12□□□□□ -1.27
UBR3-204ENST00000430321 SPTY2D1Q68D10 685 aaPredicted RBP7.12□□□□□ -1.27
UBR3-204ENST00000430321 DZIP1LQ8IYY4 767 aaKnown RBP7.12□□□□□ -1.27
UBR3-204ENST00000430321 CTNNA3Q9UI47 895 aa7.12□□□□□ -1.27
UBR3-204ENST00000430321 ABCC11Q96J66 1382 aa7.12□□□□□ -1.27
UBR3-204ENST00000430321 EIF4G3O43432 1585 aaKnown RBP7.12□□□□□ -1.27
UBR3-204ENST00000430321 CCDC57Q2TAC2 916 aa7.12□□□□□ -1.27
UBR3-204ENST00000430321 SRCIN1Q9C0H9 1055 aa7.12□□□□□ -1.27
UBR3-204ENST00000430321 RAPGEF6Q8TEU7 1601 aa7.11□□□□□ -1.27
UBR3-204ENST00000430321 SKOR2Q2VWA4 1001 aaPredicted RBP7.11□□□□□ -1.27
UBR3-204ENST00000430321 NCBP3Q53F19 620 aaKnown RBP7.11□□□□□ -1.27
UBR3-204ENST00000430321 PPP4R3AQ6IN85 833 aa7.11□□□□□ -1.27
UBR3-204ENST00000430321 KIF21AQ7Z4S6 1674 aa7.11□□□□□ -1.27
UBR3-204ENST00000430321 CAVIN4Q5BKX8 364 aa7.11□□□□□ -1.27
UBR3-204ENST00000430321 MYO6Q9UM54 1294 aa7.11□□□□□ -1.27
UBR3-204ENST00000430321 LMTK3Q96Q04 1460 aa7.11□□□□□ -1.27
UBR3-204ENST00000430321 GSTO1P78417 241 aa7.11□□□□□ -1.27
UBR3-204ENST00000430321 PPP1R42Q7Z4L9 355 aa7.11□□□□□ -1.27
UBR3-204ENST00000430321 TRPM2O94759 1503 aa7.11□□□□□ -1.27
UBR3-204ENST00000430321 SOGA3Q5TF21 947 aa7.11□□□□□ -1.27
UBR3-204ENST00000430321 CABP2Q9NPB3 220 aa7.11□□□□□ -1.27
UBR3-204ENST00000430321 NEO1Q92859 1461 aa7.11□□□□□ -1.27
UBR3-204ENST00000430321 MSNP26038 577 aaKnown RBP7.1□□□□□ -1.27
UBR3-204ENST00000430321 LRRCC1Q9C099 1032 aa7.1□□□□□ -1.27
UBR3-204ENST00000430321 NYXQ9GZU5 481 aa7.1□□□□□ -1.27
UBR3-204ENST00000430321 CDKL5O76039 1030 aa7.1□□□□□ -1.27
UBR3-204ENST00000430321 WASF1Q92558 559 aa7.1□□□□□ -1.27
UBR3-204ENST00000430321 NUDT16Q96DE0 195 aaKnown RBP7.1□□□□□ -1.27
UBR3-204ENST00000430321 A0A0U1RQG5 324 aaPredicted RBP7.1□□□□□ -1.27
UBR3-204ENST00000430321 ODF2Q5BJF6 829 aa7.1□□□□□ -1.27
UBR3-204ENST00000430321 CDK5RAP3Q96JB5 506 aa7.1□□□□□ -1.27
UBR3-204ENST00000430321 ANO2Q9NQ90 1003 aa7.1□□□□□ -1.27
UBR3-204ENST00000430321 STK32BQ9NY57 414 aa7.1□□□□□ -1.27
UBR3-204ENST00000430321 A2MP01023 1474 aa7.1□□□□□ -1.27
UBR3-204ENST00000430321 MCM2P49736 904 aa7.1□□□□□ -1.27
UBR3-204ENST00000430321 ZGPATQ8N5A5 531 aaKnown RBP7.1□□□□□ -1.27
UBR3-204ENST00000430321 RILPL2Q969X0 211 aa7.1□□□□□ -1.27
UBR3-204ENST00000430321 BCL11BQ9C0K0 894 aaPredicted RBP7.1□□□□□ -1.27
UBR3-204ENST00000430321 DDX11L8A8MPP1 907 aa7.1□□□□□ -1.27
UBR3-204ENST00000430321 IFIT1P09914 478 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms