RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 TMEM131LA2VDJ0 1609 aa19.12■□□□□ 0.65
LINC00839-202ENST00000429940 U2AF1L5P0DN76 240 aaPredicted RBP19.11■□□□□ 0.65
LINC00839-202ENST00000429940 U2AF1Q01081 240 aaKnown RBP eCLIP19.11■□□□□ 0.65
LINC00839-202ENST00000429940 NCBP3Q53F19 620 aaKnown RBP19.11■□□□□ 0.65
LINC00839-202ENST00000429940 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.11■□□□□ 0.65
LINC00839-202ENST00000429940 ZKSCAN2Q63HK3 967 aa19.1■□□□□ 0.65
LINC00839-202ENST00000429940 TNRQ92752 1358 aa19.1■□□□□ 0.65
LINC00839-202ENST00000429940 ADGRB2O60241 1585 aa19.1■□□□□ 0.65
LINC00839-202ENST00000429940 FTSJ3Q8IY81 847 aaKnown RBP19.09■□□□□ 0.65
LINC00839-202ENST00000429940 TBC1D2Q9BYX2 928 aa19.09■□□□□ 0.65
LINC00839-202ENST00000429940 NSD2O96028 1365 aa19.09■□□□□ 0.65
LINC00839-202ENST00000429940 ANKRD36BQ8N2N9 1353 aa19.08■□□□□ 0.65
LINC00839-202ENST00000429940 EVC2Q86UK5 1308 aa19.08■□□□□ 0.64
LINC00839-202ENST00000429940 RIMS1Q86UR5 1692 aaKnown RBP19.08■□□□□ 0.64
LINC00839-202ENST00000429940 DZIP1LQ8IYY4 767 aaKnown RBP19.08■□□□□ 0.64
LINC00839-202ENST00000429940 RPGRIP1LQ68CZ1 1315 aa19.07■□□□□ 0.64
LINC00839-202ENST00000429940 TULP4Q9NRJ4 1543 aa19.07■□□□□ 0.64
LINC00839-202ENST00000429940 NEXMIFQ5QGS0 1516 aa19.06■□□□□ 0.64
LINC00839-202ENST00000429940 PUS7Q96PZ0 661 aaKnown RBP19.06■□□□□ 0.64
LINC00839-202ENST00000429940 CT47B1P0C2W7 299 aaPredicted RBP19.05■□□□□ 0.64
LINC00839-202ENST00000429940 ARHGEF28Q8N1W1 1705 aaKnown RBP19.05■□□□□ 0.64
LINC00839-202ENST00000429940 TSR2Q969E8 191 aaKnown RBP19.05■□□□□ 0.64
LINC00839-202ENST00000429940 A2ML1A8K2U0 1454 aa19.05■□□□□ 0.64
LINC00839-202ENST00000429940 FAM43AQ8N2R8 423 aa19.05■□□□□ 0.64
LINC00839-202ENST00000429940 VGFO15240 615 aaPredicted RBP19.04■□□□□ 0.64
LINC00839-202ENST00000429940 SMC4Q9NTJ3 1288 aa19.04■□□□□ 0.64
LINC00839-202ENST00000429940 ADAMTSL3P82987 1691 aa19.02■□□□□ 0.64
LINC00839-202ENST00000429940 EXOSC9Q06265 439 aaKnown RBP19.02■□□□□ 0.64
LINC00839-202ENST00000429940 CABP2Q9NPB3 220 aa19.02■□□□□ 0.64
LINC00839-202ENST00000429940 TRIM27P14373 513 aa19.01■□□□□ 0.63
LINC00839-202ENST00000429940 L1TD1Q5T7N2 865 aaKnown RBP19.01■□□□□ 0.63
LINC00839-202ENST00000429940 U2SURPO15042 1029 aaKnown RBP19■□□□□ 0.63
LINC00839-202ENST00000429940 SPRYD3Q8NCJ5 442 aa19■□□□□ 0.63
LINC00839-202ENST00000429940 C22orf23Q9BZE7 217 aa19■□□□□ 0.63
LINC00839-202ENST00000429940 HDAC1Q13547 482 aaPredicted RBP19■□□□□ 0.63
LINC00839-202ENST00000429940 ITPRIPQ8IWB1 547 aa19■□□□□ 0.63
LINC00839-202ENST00000429940 DDX19BQ9UMR2 479 aa19■□□□□ 0.63
LINC00839-202ENST00000429940 TMPOP42166 694 aaKnown RBP18.99■□□□□ 0.63
LINC00839-202ENST00000429940 MFAP1P55081 439 aaKnown RBP18.99■□□□□ 0.63
LINC00839-202ENST00000429940 PLEKHF1Q96S99 279 aa18.99■□□□□ 0.63
LINC00839-202ENST00000429940 SSH1Q8WYL5 1049 aa18.99■□□□□ 0.63
LINC00839-202ENST00000429940 TRIM35Q9UPQ4 493 aa18.98■□□□□ 0.63
LINC00839-202ENST00000429940 RIMS2Q9UQ26 1411 aa18.98■□□□□ 0.63
LINC00839-202ENST00000429940 A0A1W2PP64 1363 aa18.98■□□□□ 0.63
LINC00839-202ENST00000429940 ABCC11Q96J66 1382 aa18.98■□□□□ 0.63
LINC00839-202ENST00000429940 ATF7IPQ6VMQ6 1270 aa18.98■□□□□ 0.63
LINC00839-202ENST00000429940 SAFB2Q14151 953 aaKnown RBP eCLIP18.97■□□□□ 0.63
LINC00839-202ENST00000429940 UBR1Q8IWV7 1749 aa18.97■□□□□ 0.63
LINC00839-202ENST00000429940 COL3A1P02461 1466 aaPredicted RBP18.97■□□□□ 0.63
LINC00839-202ENST00000429940 GGNBP2Q9H3C7 697 aa18.96■□□□□ 0.63
LINC00839-202ENST00000429940 NOB1Q9ULX3 412 aaKnown RBP18.96■□□□□ 0.63
LINC00839-202ENST00000429940 LTKP29376 864 aa18.95■□□□□ 0.62
LINC00839-202ENST00000429940 MCM4P33991 863 aa18.95■□□□□ 0.62
LINC00839-202ENST00000429940 STK26Q9P289 416 aa18.95■□□□□ 0.62
LINC00839-202ENST00000429940 IL16Q14005 1332 aa18.95■□□□□ 0.62
LINC00839-202ENST00000429940 SMC5Q8IY18 1101 aa18.94■□□□□ 0.62
LINC00839-202ENST00000429940 CHMP5Q9NZZ3 219 aa18.94■□□□□ 0.62
LINC00839-202ENST00000429940 PRKCSHP14314 528 aaPredicted RBP18.94■□□□□ 0.62
LINC00839-202ENST00000429940 SRPK2P78362 688 aaKnown RBP18.94■□□□□ 0.62
LINC00839-202ENST00000429940 TMEM57Q8N5G2 664 aa18.93■□□□□ 0.62
LINC00839-202ENST00000429940 ZFYVE9O95405 1425 aa18.93■□□□□ 0.62
LINC00839-202ENST00000429940 TMEM2Q9UHN6 1383 aa18.93■□□□□ 0.62
LINC00839-202ENST00000429940 ANKRD26Q9UPS8 1709 aa18.92■□□□□ 0.62
LINC00839-202ENST00000429940 KIF16BQ96L93 1317 aa18.92■□□□□ 0.62
LINC00839-202ENST00000429940 RIPK4P57078 832 aa18.91■□□□□ 0.62
LINC00839-202ENST00000429940 ZBTB40Q9NUA8 1239 aa18.91■□□□□ 0.62
LINC00839-202ENST00000429940 GOLGA6L3A6NEY3 463 aa18.91■□□□□ 0.62
LINC00839-202ENST00000429940 TXNDC2Q86VQ3 553 aa18.91■□□□□ 0.62
LINC00839-202ENST00000429940 HSCBQ8IWL3 235 aa18.91■□□□□ 0.62
LINC00839-202ENST00000429940 IPO8O15397 1037 aaKnown RBP18.9■□□□□ 0.62
LINC00839-202ENST00000429940 ARXQ96QS3 562 aa18.9■□□□□ 0.62
LINC00839-202ENST00000429940 PTPRMP28827 1452 aa18.9■□□□□ 0.62
LINC00839-202ENST00000429940 RSPH6AQ9H0K4 717 aa18.9■□□□□ 0.62
LINC00839-202ENST00000429940 MED14O60244 1454 aa18.89■□□□□ 0.61
LINC00839-202ENST00000429940 FYB1O15117 783 aa18.89■□□□□ 0.61
LINC00839-202ENST00000429940 GZF1Q9H116 711 aaPredicted RBP18.89■□□□□ 0.61
LINC00839-202ENST00000429940 TERF2IPQ9NYB0 399 aa18.89■□□□□ 0.61
LINC00839-202ENST00000429940 FSD2A1L4K1 749 aa18.88■□□□□ 0.61
LINC00839-202ENST00000429940 EIF5BO60841 1220 aaKnown RBP18.88■□□□□ 0.61
LINC00839-202ENST00000429940 KDM4FA0A1W2PPD8 638 aa18.88■□□□□ 0.61
LINC00839-202ENST00000429940 DIAPH1O60610 1272 aaKnown RBP18.88■□□□□ 0.61
LINC00839-202ENST00000429940 XRCC6P12956 609 aaKnown RBP eCLIP18.88■□□□□ 0.61
LINC00839-202ENST00000429940 NUCB1Q02818 461 aa18.88■□□□□ 0.61
LINC00839-202ENST00000429940 PNNQ9H307 717 aaKnown RBP18.88■□□□□ 0.61
LINC00839-202ENST00000429940 ATAD2Q6PL18 1390 aa18.87■□□□□ 0.61
LINC00839-202ENST00000429940 ALKQ9UM73 1620 aa18.87■□□□□ 0.61
LINC00839-202ENST00000429940 THEMISQ8N1K5 641 aaPredicted RBP18.87■□□□□ 0.61
LINC00839-202ENST00000429940 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.87■□□□□ 0.61
LINC00839-202ENST00000429940 TRAK2O60296 914 aa18.86■□□□□ 0.61
LINC00839-202ENST00000429940 SLC26A8Q96RN1 970 aa18.86■□□□□ 0.61
LINC00839-202ENST00000429940 RRAGDQ9NQL2 400 aaPredicted RBP18.86■□□□□ 0.61
LINC00839-202ENST00000429940 CD163L1Q9NR16 1453 aa18.86■□□□□ 0.61
LINC00839-202ENST00000429940 ALDH1L2Q3SY69 923 aa18.86■□□□□ 0.61
LINC00839-202ENST00000429940 MINK1Q8N4C8 1332 aaPredicted RBP18.85■□□□□ 0.61
LINC00839-202ENST00000429940 SETD1BQ9UPS6 1966 aaKnown RBP18.85■□□□□ 0.61
LINC00839-202ENST00000429940 RBM25P49756 843 aaKnown RBP18.85■□□□□ 0.61
LINC00839-202ENST00000429940 LNPKQ9C0E8 428 aa18.85■□□□□ 0.61
LINC00839-202ENST00000429940 CHD1LQ86WJ1 897 aa18.84■□□□□ 0.61
LINC00839-202ENST00000429940 ZNF692Q9BU19 519 aaPredicted RBP18.84■□□□□ 0.61
LINC00839-202ENST00000429940 CEP170BQ9Y4F5 1589 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms