RNA–Protein interactions for RNA: ENST00000429805.1

PNPT1-204, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 3

Gene PNPT1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-204ENST00000429805 CDC42BPGQ6DT37 1551 aa17.2■□□□□ 0.34
PNPT1-204ENST00000429805 HDGFL2Q7Z4V5 671 aaPredicted RBP17.2■□□□□ 0.34
PNPT1-204ENST00000429805 DDX17Q92841 729 aaKnown RBP17.2■□□□□ 0.34
PNPT1-204ENST00000429805 CPSF1Q10570 1443 aaKnown RBP17.2■□□□□ 0.34
PNPT1-204ENST00000429805 CNGB1Q14028 1251 aaPredicted RBP17.19■□□□□ 0.34
PNPT1-204ENST00000429805 PPIP5K1Q6PFW1 1433 aa17.19■□□□□ 0.34
PNPT1-204ENST00000429805 PNISRQ8TF01 805 aaKnown RBP17.18■□□□□ 0.34
PNPT1-204ENST00000429805 NUDT16Q96DE0 195 aaKnown RBP17.18■□□□□ 0.34
PNPT1-204ENST00000429805 CABP1Q9NZU7 370 aa17.18■□□□□ 0.34
PNPT1-204ENST00000429805 CCDC61Q9Y6R9 512 aa17.18■□□□□ 0.34
PNPT1-204ENST00000429805 SPATA31A6Q5VVP1 1343 aa17.18■□□□□ 0.34
PNPT1-204ENST00000429805 C1orf167Q5SNV9 1468 aa17.18■□□□□ 0.34
PNPT1-204ENST00000429805 INSRP06213 1382 aa17.17■□□□□ 0.34
PNPT1-204ENST00000429805 PPP2R1AP30153 589 aa17.17■□□□□ 0.34
PNPT1-204ENST00000429805 ANKRD26Q9UPS8 1709 aa17.17■□□□□ 0.34
PNPT1-204ENST00000429805 PRR36Q9H6K5 1346 aa17.17■□□□□ 0.34
PNPT1-204ENST00000429805 ITSN1Q15811 1721 aa17.16■□□□□ 0.34
PNPT1-204ENST00000429805 MON2Q7Z3U7 1717 aa17.16■□□□□ 0.34
PNPT1-204ENST00000429805 ANKARQ7Z5J8 1434 aa17.16■□□□□ 0.34
PNPT1-204ENST00000429805 AKAP12Q02952 1782 aa17.16■□□□□ 0.34
PNPT1-204ENST00000429805 EDC4Q6P2E9 1401 aaKnown RBP17.15■□□□□ 0.34
PNPT1-204ENST00000429805 MEX3CQ5U5Q3 659 aaKnown RBP17.15■□□□□ 0.34
PNPT1-204ENST00000429805 FMN2Q9NZ56 1722 aa17.15■□□□□ 0.34
PNPT1-204ENST00000429805 NUTM2BA6NNL0 878 aaPredicted RBP17.14■□□□□ 0.33
PNPT1-204ENST00000429805 NUTM2EB1AL46 878 aaPredicted RBP17.14■□□□□ 0.33
PNPT1-204ENST00000429805 NUTM2AQ8IVF1 878 aaPredicted RBP17.14■□□□□ 0.33
PNPT1-204ENST00000429805 ORAI2Q96SN7 254 aa17.14■□□□□ 0.33
PNPT1-204ENST00000429805 KIF20BQ96Q89 1820 aa17.14■□□□□ 0.33
PNPT1-204ENST00000429805 PLEKHG3A1L390 1219 aa17.13■□□□□ 0.33
PNPT1-204ENST00000429805 FAM9BQ8IZU0 186 aa17.13■□□□□ 0.33
PNPT1-204ENST00000429805 MORC1Q86VD1 984 aa17.12■□□□□ 0.33
PNPT1-204ENST00000429805 ZNF692Q9BU19 519 aaPredicted RBP17.12■□□□□ 0.33
PNPT1-204ENST00000429805 LRRC59Q96AG4 307 aaKnown RBP17.11■□□□□ 0.33
PNPT1-204ENST00000429805 PNPLA6Q8IY17 1366 aa17.11■□□□□ 0.33
PNPT1-204ENST00000429805 NRKQ7Z2Y5 1582 aa17.11■□□□□ 0.33
PNPT1-204ENST00000429805 FYB1O15117 783 aa17.09■□□□□ 0.33
PNPT1-204ENST00000429805 POLR3AO14802 1390 aaPredicted RBP17.09■□□□□ 0.33
PNPT1-204ENST00000429805 HNRNPUQ00839 825 aaKnown RBP eCLIP17.08■□□□□ 0.32
PNPT1-204ENST00000429805 SOS2Q07890 1332 aaPredicted RBP17.06■□□□□ 0.32
PNPT1-204ENST00000429805 ZBED9Q6R2W3 1325 aa17.06■□□□□ 0.32
PNPT1-204ENST00000429805 NUTM2FA1L443 756 aa17.06■□□□□ 0.32
PNPT1-204ENST00000429805 ZNF772Q68DY9 489 aaPredicted RBP17.06■□□□□ 0.32
PNPT1-204ENST00000429805 USP6P35125 1406 aa17.05■□□□□ 0.32
PNPT1-204ENST00000429805 BLMP54132 1417 aaPredicted RBP17.05■□□□□ 0.32
PNPT1-204ENST00000429805 SSH2Q76I76 1423 aa17.05■□□□□ 0.32
PNPT1-204ENST00000429805 ACEP12821 1306 aa17.05■□□□□ 0.32
PNPT1-204ENST00000429805 AFF2P51816 1311 aa17.05■□□□□ 0.32
PNPT1-204ENST00000429805 ESCO1Q5FWF5 840 aa17.04■□□□□ 0.32
PNPT1-204ENST00000429805 RGPD8O14715 1765 aaPredicted RBP17.04■□□□□ 0.32
PNPT1-204ENST00000429805 GGNBP2Q9H3C7 697 aa17.03■□□□□ 0.32
PNPT1-204ENST00000429805 XPCQ01831 940 aaPredicted RBP17.02■□□□□ 0.32
PNPT1-204ENST00000429805 C8orf37Q96NL8 207 aa17.02■□□□□ 0.32
PNPT1-204ENST00000429805 TTC21AQ8NDW8 1320 aa17.01■□□□□ 0.31
PNPT1-204ENST00000429805 ADAMTS2O95450 1211 aa17.01■□□□□ 0.31
PNPT1-204ENST00000429805 TTC21BQ7Z4L5 1316 aa17■□□□□ 0.31
PNPT1-204ENST00000429805 PXDNQ92626 1479 aa17■□□□□ 0.31
PNPT1-204ENST00000429805 FOXO3O43524 673 aa17■□□□□ 0.31
PNPT1-204ENST00000429805 WDR43Q15061 677 aaKnown RBP eCLIP17■□□□□ 0.31
PNPT1-204ENST00000429805 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17■□□□□ 0.31
PNPT1-204ENST00000429805 AATKQ6ZMQ8 1374 aa17■□□□□ 0.31
PNPT1-204ENST00000429805 NPHP3Q7Z494 1330 aa16.99■□□□□ 0.31
PNPT1-204ENST00000429805 SMG6Q86US8 1419 aaKnown RBP16.99■□□□□ 0.31
PNPT1-204ENST00000429805 MTHFSP49914 203 aa16.99■□□□□ 0.31
PNPT1-204ENST00000429805 CFAP53Q96M91 514 aa16.99■□□□□ 0.31
PNPT1-204ENST00000429805 COL22A1Q8NFW1 1626 aaPredicted RBP16.99■□□□□ 0.31
PNPT1-204ENST00000429805 USP54Q70EL1 1684 aa16.98■□□□□ 0.31
PNPT1-204ENST00000429805 OVOS2A0A0J9YW53 1432 aa16.98■□□□□ 0.31
PNPT1-204ENST00000429805 OVOS2Q6IE36 1432 aa16.98■□□□□ 0.31
PNPT1-204ENST00000429805 RXRBP28702 533 aa16.98■□□□□ 0.31
PNPT1-204ENST00000429805 COL3A1P02461 1466 aaPredicted RBP16.98■□□□□ 0.31
PNPT1-204ENST00000429805 TNNT2P45379 298 aaPredicted RBP16.97■□□□□ 0.31
PNPT1-204ENST00000429805 NME9Q86XW9 330 aa16.97■□□□□ 0.31
PNPT1-204ENST00000429805 NGDNQ8NEJ9 315 aaKnown RBP16.97■□□□□ 0.31
PNPT1-204ENST00000429805 ADAMTS8Q9UP79 889 aa16.97■□□□□ 0.31
PNPT1-204ENST00000429805 USP31Q70CQ4 1352 aa16.97■□□□□ 0.31
PNPT1-204ENST00000429805 NGLY1Q96IV0 654 aa16.96■□□□□ 0.31
PNPT1-204ENST00000429805 COG3Q96JB2 828 aa16.96■□□□□ 0.31
PNPT1-204ENST00000429805 PHF8Q9UPP1 1060 aa16.96■□□□□ 0.31
PNPT1-204ENST00000429805 KIF1AQ12756 1690 aa16.95■□□□□ 0.3
PNPT1-204ENST00000429805 PMFBP1Q8TBY8 1022 aa16.95■□□□□ 0.3
PNPT1-204ENST00000429805 QTRT2Q9H974 415 aaKnown RBP16.94■□□□□ 0.3
PNPT1-204ENST00000429805 CDK12Q9NYV4 1490 aaPredicted RBP16.93■□□□□ 0.3
PNPT1-204ENST00000429805 PIK3C2AO00443 1686 aa16.93■□□□□ 0.3
PNPT1-204ENST00000429805 RGS12O14924 1447 aa16.92■□□□□ 0.3
PNPT1-204ENST00000429805 MARF1Q9Y4F3 1742 aaKnown RBP16.91■□□□□ 0.3
PNPT1-204ENST00000429805 POLKQ9UBT6 870 aa16.91■□□□□ 0.3
PNPT1-204ENST00000429805 ZRANB1Q9UGI0 708 aa16.91■□□□□ 0.3
PNPT1-204ENST00000429805 RBM6P78332 1123 aaKnown RBP16.9■□□□□ 0.3
PNPT1-204ENST00000429805 KRT28Q7Z3Y7 464 aa16.9■□□□□ 0.3
PNPT1-204ENST00000429805 NGEFQ8N5V2 710 aa16.9■□□□□ 0.3
PNPT1-204ENST00000429805 UPF1Q92900 1129 aaKnown RBP eCLIP16.9■□□□□ 0.3
PNPT1-204ENST00000429805 USP21Q9UK80 565 aa16.9■□□□□ 0.3
PNPT1-204ENST00000429805 MAP2P11137 1827 aaKnown RBP16.9■□□□□ 0.3
PNPT1-204ENST00000429805 SPATA31A3Q5VYP0 1347 aa16.9■□□□□ 0.3
PNPT1-204ENST00000429805 PDE3BQ13370 1112 aa16.88■□□□□ 0.29
PNPT1-204ENST00000429805 FNBP4Q8N3X1 1017 aaPredicted RBP16.88■□□□□ 0.29
PNPT1-204ENST00000429805 NUDCQ9Y266 331 aa16.88■□□□□ 0.29
PNPT1-204ENST00000429805 DIAPH1O60610 1272 aaKnown RBP16.86■□□□□ 0.29
PNPT1-204ENST00000429805 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
PNPT1-204ENST00000429805 ATRNO75882 1429 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms