RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 ATP7BP35670 1465 aa11.63□□□□□ -0.55
NUP98-207ENST00000429801 STRCP1A6NGW2 1772 aa11.62□□□□□ -0.55
NUP98-207ENST00000429801 PPIP5K1Q6PFW1 1433 aa11.62□□□□□ -0.55
NUP98-207ENST00000429801 ANKARQ7Z5J8 1434 aa11.62□□□□□ -0.55
NUP98-207ENST00000429801 TMEM94Q12767 1356 aa11.62□□□□□ -0.55
NUP98-207ENST00000429801 C19orf44Q9H6X5 657 aa11.61□□□□□ -0.55
NUP98-207ENST00000429801 PRKRIP1Q9H875 184 aaPredicted RBP11.61□□□□□ -0.55
NUP98-207ENST00000429801 BRPF3Q9ULD4 1205 aa11.61□□□□□ -0.55
NUP98-207ENST00000429801 ZNF335Q9H4Z2 1342 aaPredicted RBP11.61□□□□□ -0.55
NUP98-207ENST00000429801 PRR36Q9H6K5 1346 aa11.61□□□□□ -0.55
NUP98-207ENST00000429801 KTN1Q86UP2 1357 aaKnown RBP11.61□□□□□ -0.55
NUP98-207ENST00000429801 PAK3O75914 559 aaPredicted RBP11.61□□□□□ -0.55
NUP98-207ENST00000429801 CARD14Q9BXL6 1004 aa11.61□□□□□ -0.55
NUP98-207ENST00000429801 A0A1W2PP64 1363 aa11.61□□□□□ -0.55
NUP98-207ENST00000429801 NUTM2FA1L443 756 aa11.6□□□□□ -0.55
NUP98-207ENST00000429801 FMN2Q9NZ56 1722 aa11.6□□□□□ -0.55
NUP98-207ENST00000429801 PLEKHG3A1L390 1219 aa11.59□□□□□ -0.55
NUP98-207ENST00000429801 RALBP1Q15311 655 aa11.59□□□□□ -0.55
NUP98-207ENST00000429801 ZNF692Q9BU19 519 aaPredicted RBP11.59□□□□□ -0.55
NUP98-207ENST00000429801 NPC1L1Q9UHC9 1359 aa11.59□□□□□ -0.55
NUP98-207ENST00000429801 NSD3Q9BZ95 1437 aa11.59□□□□□ -0.55
NUP98-207ENST00000429801 CD163L1Q9NR16 1453 aa11.59□□□□□ -0.55
NUP98-207ENST00000429801 DCCP43146 1447 aa11.59□□□□□ -0.55
NUP98-207ENST00000429801 ITSN1Q15811 1721 aa11.59□□□□□ -0.55
NUP98-207ENST00000429801 TOPAZ1Q8N9V7 1692 aa11.59□□□□□ -0.55
NUP98-207ENST00000429801 USP32Q8NFA0 1604 aa11.58□□□□□ -0.55
NUP98-207ENST00000429801 CGNL1Q0VF96 1302 aa11.58□□□□□ -0.56
NUP98-207ENST00000429801 ZBTB22O15209 634 aa11.58□□□□□ -0.56
NUP98-207ENST00000429801 CNGB1Q14028 1251 aaPredicted RBP11.58□□□□□ -0.56
NUP98-207ENST00000429801 LRRC7Q96NW7 1537 aa11.58□□□□□ -0.56
NUP98-207ENST00000429801 CPSF1Q10570 1443 aaKnown RBP11.58□□□□□ -0.56
NUP98-207ENST00000429801 MSH6P52701 1360 aa11.58□□□□□ -0.56
NUP98-207ENST00000429801 CCER2I3L3R5 266 aa11.58□□□□□ -0.56
NUP98-207ENST00000429801 ATF3P18847 181 aa11.58□□□□□ -0.56
NUP98-207ENST00000429801 CC2D1BQ5T0F9 858 aaKnown RBP11.58□□□□□ -0.56
NUP98-207ENST00000429801 NAP1L2Q9ULW6 460 aaPredicted RBP11.57□□□□□ -0.56
NUP98-207ENST00000429801 CADPS2Q86UW7 1296 aa11.57□□□□□ -0.56
NUP98-207ENST00000429801 CHMP4BQ9H444 224 aaKnown RBP11.57□□□□□ -0.56
NUP98-207ENST00000429801 NSD2O96028 1365 aa11.56□□□□□ -0.56
NUP98-207ENST00000429801 PARD3Q8TEW0 1356 aa11.56□□□□□ -0.56
NUP98-207ENST00000429801 ACEP12821 1306 aa11.56□□□□□ -0.56
NUP98-207ENST00000429801 RTL5Q5HYW3 569 aaPredicted RBP11.56□□□□□ -0.56
NUP98-207ENST00000429801 NOP58Q9Y2X3 529 aaKnown RBP11.56□□□□□ -0.56
NUP98-207ENST00000429801 NGDNQ8NEJ9 315 aaKnown RBP11.55□□□□□ -0.56
NUP98-207ENST00000429801 EDC4Q6P2E9 1401 aaKnown RBP11.55□□□□□ -0.56
NUP98-207ENST00000429801 POLR3AO14802 1390 aaPredicted RBP11.55□□□□□ -0.56
NUP98-207ENST00000429801 PMFBP1Q8TBY8 1022 aa11.55□□□□□ -0.56
NUP98-207ENST00000429801 RGPD8O14715 1765 aaPredicted RBP11.55□□□□□ -0.56
NUP98-207ENST00000429801 ESCO1Q5FWF5 840 aa11.54□□□□□ -0.56
NUP98-207ENST00000429801 PHF8Q9UPP1 1060 aa11.54□□□□□ -0.56
NUP98-207ENST00000429801 AKAP12Q02952 1782 aa11.54□□□□□ -0.56
NUP98-207ENST00000429801 MYBBP1AQ9BQG0 1328 aaKnown RBP11.54□□□□□ -0.56
NUP98-207ENST00000429801 XIRP1Q702N8 1843 aaKnown RBP11.54□□□□□ -0.56
NUP98-207ENST00000429801 MON2Q7Z3U7 1717 aa11.53□□□□□ -0.56
NUP98-207ENST00000429801 SAMD1Q6SPF0 538 aaPredicted RBP11.53□□□□□ -0.56
NUP98-207ENST00000429801 C1orf167Q5SNV9 1468 aa11.53□□□□□ -0.56
NUP98-207ENST00000429801 USP6P35125 1406 aa11.53□□□□□ -0.56
NUP98-207ENST00000429801 MST1RQ04912 1400 aa11.53□□□□□ -0.56
NUP98-207ENST00000429801 MORC1Q86VD1 984 aa11.52□□□□□ -0.56
NUP98-207ENST00000429801 FYB1O15117 783 aa11.52□□□□□ -0.57
NUP98-207ENST00000429801 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.52□□□□□ -0.57
NUP98-207ENST00000429801 NLRP13Q86W25 1043 aa11.51□□□□□ -0.57
NUP98-207ENST00000429801 BRD4O60885 1362 aaPredicted RBP11.51□□□□□ -0.57
NUP98-207ENST00000429801 ORAI2Q96SN7 254 aa11.51□□□□□ -0.57
NUP98-207ENST00000429801 LTBP4Q8N2S1 1624 aa11.51□□□□□ -0.57
NUP98-207ENST00000429801 BRD2P25440 801 aaKnown RBP11.5□□□□□ -0.57
NUP98-207ENST00000429801 NAP1L5Q96NT1 182 aaPredicted RBP11.5□□□□□ -0.57
NUP98-207ENST00000429801 GGNBP2Q9H3C7 697 aa11.5□□□□□ -0.57
NUP98-207ENST00000429801 TTC21BQ7Z4L5 1316 aa11.5□□□□□ -0.57
NUP98-207ENST00000429801 TTC21AQ8NDW8 1320 aa11.5□□□□□ -0.57
NUP98-207ENST00000429801 MRS2Q9HD23 443 aa11.5□□□□□ -0.57
NUP98-207ENST00000429801 KIF1AQ12756 1690 aa11.5□□□□□ -0.57
NUP98-207ENST00000429801 NRKQ7Z2Y5 1582 aa11.49□□□□□ -0.57
NUP98-207ENST00000429801 SSH2Q76I76 1423 aa11.49□□□□□ -0.57
NUP98-207ENST00000429801 KIF20BQ96Q89 1820 aa11.49□□□□□ -0.57
NUP98-207ENST00000429801 PSME1Q06323 249 aa11.49□□□□□ -0.57
NUP98-207ENST00000429801 PPP2R1AP30153 589 aa11.49□□□□□ -0.57
NUP98-207ENST00000429801 BBXQ8WY36 941 aaPredicted RBP11.49□□□□□ -0.57
NUP98-207ENST00000429801 SLAIN2Q9P270 581 aa11.48□□□□□ -0.57
NUP98-207ENST00000429801 NME9Q86XW9 330 aa11.48□□□□□ -0.57
NUP98-207ENST00000429801 COG3Q96JB2 828 aa11.48□□□□□ -0.57
NUP98-207ENST00000429801 ANKRD26Q9UPS8 1709 aa11.48□□□□□ -0.57
NUP98-207ENST00000429801 FOXO3O43524 673 aa11.47□□□□□ -0.57
NUP98-207ENST00000429801 GTF2E1P29083 439 aaPredicted RBP11.46□□□□□ -0.57
NUP98-207ENST00000429801 TNNT2P45379 298 aaPredicted RBP11.46□□□□□ -0.57
NUP98-207ENST00000429801 HSP90AA2PQ14568 343 aaPredicted RBP11.46□□□□□ -0.57
NUP98-207ENST00000429801 CCDC184Q52MB2 194 aa11.46□□□□□ -0.57
NUP98-207ENST00000429801 NPHP3Q7Z494 1330 aa11.46□□□□□ -0.58
NUP98-207ENST00000429801 NPM2Q86SE8 214 aaKnown RBP11.46□□□□□ -0.58
NUP98-207ENST00000429801 PRDM4Q9UKN5 801 aa11.45□□□□□ -0.58
NUP98-207ENST00000429801 IRX6P78412 446 aaPredicted RBP11.45□□□□□ -0.58
NUP98-207ENST00000429801 KRT28Q7Z3Y7 464 aa11.45□□□□□ -0.58
NUP98-207ENST00000429801 ABTB2Q8N961 1025 aa11.45□□□□□ -0.58
NUP98-207ENST00000429801 USP31Q70CQ4 1352 aa11.44□□□□□ -0.58
NUP98-207ENST00000429801 BRINP3Q76B58 766 aa11.44□□□□□ -0.58
NUP98-207ENST00000429801 TMEM132AQ24JP5 1023 aa11.44□□□□□ -0.58
NUP98-207ENST00000429801 OVOS2A0A0J9YW53 1432 aa11.44□□□□□ -0.58
NUP98-207ENST00000429801 OVOS2Q6IE36 1432 aa11.44□□□□□ -0.58
NUP98-207ENST00000429801 RGS3P49796 1198 aa11.43□□□□□ -0.58
NUP98-207ENST00000429801 NLRP6P59044 892 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms