RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 ZMYM4Q5VZL5 1548 aa15.45■□□□□ 0.06
CPNE4-201ENST00000429747 EIF2S2P20042 333 aaKnown RBP15.45■□□□□ 0.06
CPNE4-201ENST00000429747 RRS1Q15050 365 aaKnown RBP15.45■□□□□ 0.06
CPNE4-201ENST00000429747 FBLN1P23142 703 aa15.44■□□□□ 0.06
CPNE4-201ENST00000429747 TNPO1Q92973 898 aaKnown RBP15.44■□□□□ 0.06
CPNE4-201ENST00000429747 PANK2Q9BZ23 570 aa15.44■□□□□ 0.06
CPNE4-201ENST00000429747 KDM5CP41229 1560 aa15.44■□□□□ 0.06
CPNE4-201ENST00000429747 DCTN1Q14203 1278 aa15.44■□□□□ 0.06
CPNE4-201ENST00000429747 SULT6B1Q6IMI4 303 aa15.44■□□□□ 0.06
CPNE4-201ENST00000429747 C14orf93Q9H972 538 aaKnown RBP15.44■□□□□ 0.06
CPNE4-201ENST00000429747 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
CPNE4-201ENST00000429747 NFE2L2Q16236 605 aa15.44■□□□□ 0.06
CPNE4-201ENST00000429747 R3HCC1Q9Y3T6 440 aaKnown RBP15.43■□□□□ 0.06
CPNE4-201ENST00000429747 TRAPPC8Q9Y2L5 1435 aa15.43■□□□□ 0.06
CPNE4-201ENST00000429747 SLC4A2P04920 1241 aa15.42■□□□□ 0.06
CPNE4-201ENST00000429747 XRCC6P12956 609 aaKnown RBP eCLIP15.42■□□□□ 0.06
CPNE4-201ENST00000429747 TXNDC2Q86VQ3 553 aa15.42■□□□□ 0.06
CPNE4-201ENST00000429747 POLR3AO14802 1390 aaPredicted RBP15.42■□□□□ 0.06
CPNE4-201ENST00000429747 ISY1Q9ULR0 285 aaKnown RBP15.42■□□□□ 0.06
CPNE4-201ENST00000429747 ATAD2Q6PL18 1390 aa15.42■□□□□ 0.06
CPNE4-201ENST00000429747 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.42■□□□□ 0.06
CPNE4-201ENST00000429747 SLC52A1Q9NWF4 448 aa15.42■□□□□ 0.06
CPNE4-201ENST00000429747 SSFA2P28290 1259 aa15.41■□□□□ 0.06
CPNE4-201ENST00000429747 CHMP3Q9Y3E7 222 aa15.41■□□□□ 0.06
CPNE4-201ENST00000429747 DUOX2Q9NRD8 1548 aa15.41■□□□□ 0.06
CPNE4-201ENST00000429747 CCDC173Q0VFZ6 552 aa15.4■□□□□ 0.06
CPNE4-201ENST00000429747 CYB5RLQ6IPT4 315 aa15.4■□□□□ 0.06
CPNE4-201ENST00000429747 ZNF428Q96B54 188 aa15.4■□□□□ 0.06
CPNE4-201ENST00000429747 ALDH1L2Q3SY69 923 aa15.4■□□□□ 0.06
CPNE4-201ENST00000429747 WAPLQ7Z5K2 1190 aa15.4■□□□□ 0.06
CPNE4-201ENST00000429747 HDAC1Q13547 482 aaPredicted RBP15.4■□□□□ 0.06
CPNE4-201ENST00000429747 GPATCH3Q96I76 525 aa15.4■□□□□ 0.06
CPNE4-201ENST00000429747 IDI1Q13907 227 aa15.39■□□□□ 0.05
CPNE4-201ENST00000429747 DIAPH3Q9NSV4 1193 aa15.39■□□□□ 0.05
CPNE4-201ENST00000429747 EMILIN1Q9Y6C2 1016 aa15.39■□□□□ 0.05
CPNE4-201ENST00000429747 PLCH2O75038 1416 aa15.39■□□□□ 0.05
CPNE4-201ENST00000429747 A0A0G2JS52 829 aa15.39■□□□□ 0.05
CPNE4-201ENST00000429747 ABCC11Q96J66 1382 aa15.39■□□□□ 0.05
CPNE4-201ENST00000429747 SMARCA5O60264 1052 aaPredicted RBP15.39■□□□□ 0.05
CPNE4-201ENST00000429747 TBC1D9Q6ZT07 1266 aa15.39■□□□□ 0.05
CPNE4-201ENST00000429747 OSCARQ8IYS5 282 aa15.39■□□□□ 0.05
CPNE4-201ENST00000429747 ADGRL1O94910 1474 aa15.39■□□□□ 0.05
CPNE4-201ENST00000429747 MPNDQ8N594 471 aa15.39■□□□□ 0.05
CPNE4-201ENST00000429747 MBD5Q9P267 1494 aa15.38■□□□□ 0.05
CPNE4-201ENST00000429747 CSPP1Q1MSJ5 1256 aa15.38■□□□□ 0.05
CPNE4-201ENST00000429747 CCDC27Q2M243 656 aa15.38■□□□□ 0.05
CPNE4-201ENST00000429747 ERC2O15083 957 aa15.37■□□□□ 0.05
CPNE4-201ENST00000429747 BMP2KLQ5H9B9 411 aa15.37■□□□□ 0.05
CPNE4-201ENST00000429747 MAGI2Q86UL8 1455 aa15.37■□□□□ 0.05
CPNE4-201ENST00000429747 INSRP06213 1382 aa15.37■□□□□ 0.05
CPNE4-201ENST00000429747 PBRM1Q86U86 1689 aa15.37■□□□□ 0.05
CPNE4-201ENST00000429747 BCORL1Q5H9F3 1711 aa15.37■□□□□ 0.05
CPNE4-201ENST00000429747 NUTM2GQ5VZR2 741 aa15.37■□□□□ 0.05
CPNE4-201ENST00000429747 ATP6V1DQ9Y5K8 247 aa15.37■□□□□ 0.05
CPNE4-201ENST00000429747 EID1Q9Y6B2 187 aa15.37■□□□□ 0.05
CPNE4-201ENST00000429747 EIF2AK4Q9P2K8 1649 aaKnown RBP15.37■□□□□ 0.05
CPNE4-201ENST00000429747 RBM42Q9BTD8 480 aaKnown RBP15.36■□□□□ 0.05
CPNE4-201ENST00000429747 VPS37CA5D8V6 355 aaPredicted RBP15.36■□□□□ 0.05
CPNE4-201ENST00000429747 NUCB1Q02818 461 aa15.36■□□□□ 0.05
CPNE4-201ENST00000429747 MIS18AQ9NYP9 233 aa15.36■□□□□ 0.05
CPNE4-201ENST00000429747 RBM10P98175 930 aaKnown RBP15.36■□□□□ 0.05
CPNE4-201ENST00000429747 FYB1O15117 783 aa15.36■□□□□ 0.05
CPNE4-201ENST00000429747 HSP90B1P14625 803 aaKnown RBP15.36■□□□□ 0.05
CPNE4-201ENST00000429747 NME9Q86XW9 330 aa15.36■□□□□ 0.05
CPNE4-201ENST00000429747 TARBP1Q13395 1621 aaKnown RBP15.35■□□□□ 0.05
CPNE4-201ENST00000429747 GOLGA6L6A8MZA4 724 aa15.35■□□□□ 0.05
CPNE4-201ENST00000429747 UBTFL1P0CB47 393 aaPredicted RBP15.35■□□□□ 0.05
CPNE4-201ENST00000429747 SMC3Q9UQE7 1217 aa15.35■□□□□ 0.05
CPNE4-201ENST00000429747 SURF6O75683 361 aaKnown RBP15.35■□□□□ 0.05
CPNE4-201ENST00000429747 MCM10Q7L590 875 aa15.35■□□□□ 0.05
CPNE4-201ENST00000429747 CHMP4AQ9BY43 222 aa15.35■□□□□ 0.05
CPNE4-201ENST00000429747 CWC22Q9HCG8 908 aaKnown RBP15.35■□□□□ 0.05
CPNE4-201ENST00000429747 TEFQ10587 303 aa15.35■□□□□ 0.05
CPNE4-201ENST00000429747 EXOC6BQ9Y2D4 811 aa15.35■□□□□ 0.05
CPNE4-201ENST00000429747 RTEL1-TNFRSF6BF6WH68 1400 aa15.35■□□□□ 0.05
CPNE4-201ENST00000429747 MBD3O95983 291 aa15.34■□□□□ 0.05
CPNE4-201ENST00000429747 GNAI2P04899 355 aa15.34■□□□□ 0.05
CPNE4-201ENST00000429747 CCDC9Q9Y3X0 531 aaKnown RBP15.34■□□□□ 0.05
CPNE4-201ENST00000429747 NPC1L1Q9UHC9 1359 aa15.34■□□□□ 0.05
CPNE4-201ENST00000429747 FANCAO15360 1455 aa15.34■□□□□ 0.05
CPNE4-201ENST00000429747 ZNF521Q96K83 1311 aa15.34■□□□□ 0.05
CPNE4-201ENST00000429747 C9orf78Q9NZ63 289 aaPredicted RBP15.34■□□□□ 0.05
CPNE4-201ENST00000429747 GNAI3P08754 354 aa15.34■□□□□ 0.05
CPNE4-201ENST00000429747 RPAP2Q8IXW5 612 aaPredicted RBP15.34■□□□□ 0.05
CPNE4-201ENST00000429747 FAM83GA6ND36 823 aa15.33■□□□□ 0.05
CPNE4-201ENST00000429747 IFT57Q9NWB7 429 aa15.33■□□□□ 0.05
CPNE4-201ENST00000429747 EIF4G3O43432 1585 aaKnown RBP15.32■□□□□ 0.04
CPNE4-201ENST00000429747 SMC5Q8IY18 1101 aa15.32■□□□□ 0.04
CPNE4-201ENST00000429747 NRDCO43847 1150 aa15.32■□□□□ 0.04
CPNE4-201ENST00000429747 ZKSCAN1P17029 563 aaPredicted RBP15.32■□□□□ 0.04
CPNE4-201ENST00000429747 FAM69CQ0P6D2 419 aa15.32■□□□□ 0.04
CPNE4-201ENST00000429747 MBIPQ9NS73 344 aa15.32■□□□□ 0.04
CPNE4-201ENST00000429747 HDAC5Q9UQL6 1122 aa15.32■□□□□ 0.04
CPNE4-201ENST00000429747 NSD2O96028 1365 aa15.32■□□□□ 0.04
CPNE4-201ENST00000429747 RUFY2Q8WXA3 655 aa15.32■□□□□ 0.04
CPNE4-201ENST00000429747 ZBTB40Q9NUA8 1239 aa15.32■□□□□ 0.04
CPNE4-201ENST00000429747 IL16Q14005 1332 aa15.31■□□□□ 0.04
CPNE4-201ENST00000429747 TPM2P07951 284 aa15.31■□□□□ 0.04
CPNE4-201ENST00000429747 IFIT2P09913 472 aaKnown RBP15.31■□□□□ 0.04
CPNE4-201ENST00000429747 TRMT2AQ8IZ69 625 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms