RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 AHDC1Q5TGY3 1603 aaPredicted RBP23.37■■□□□ 1.33
LINC00887-203ENST00000429578 USP6P35125 1406 aa23.36■■□□□ 1.33
LINC00887-203ENST00000429578 EDC4Q6P2E9 1401 aaKnown RBP23.36■■□□□ 1.33
LINC00887-203ENST00000429578 RGS17Q9UGC6 210 aaPredicted RBP23.36■■□□□ 1.33
LINC00887-203ENST00000429578 ANKRD26Q9UPS8 1709 aa23.35■■□□□ 1.33
LINC00887-203ENST00000429578 NPC1L1Q9UHC9 1359 aa23.33■■□□□ 1.33
LINC00887-203ENST00000429578 AMER1Q5JTC6 1135 aaPredicted RBP23.33■■□□□ 1.32
LINC00887-203ENST00000429578 CGNL1Q0VF96 1302 aa23.31■■□□□ 1.32
LINC00887-203ENST00000429578 SSH2Q76I76 1423 aa23.31■■□□□ 1.32
LINC00887-203ENST00000429578 TRPM3Q9HCF6 1732 aaPredicted RBP23.3■■□□□ 1.32
LINC00887-203ENST00000429578 ANP32CO43423 234 aa23.3■■□□□ 1.32
LINC00887-203ENST00000429578 FOXO3O43524 673 aa23.3■■□□□ 1.32
LINC00887-203ENST00000429578 BRD4O60885 1362 aaPredicted RBP23.3■■□□□ 1.32
LINC00887-203ENST00000429578 NHSL1Q5SYE7 1610 aa23.3■■□□□ 1.32
LINC00887-203ENST00000429578 SPATA31A6Q5VVP1 1343 aa23.29■■□□□ 1.32
LINC00887-203ENST00000429578 PSME1Q06323 249 aa23.28■■□□□ 1.32
LINC00887-203ENST00000429578 NSD2O96028 1365 aa23.28■■□□□ 1.32
LINC00887-203ENST00000429578 TTC21BQ7Z4L5 1316 aa23.27■■□□□ 1.32
LINC00887-203ENST00000429578 CC2D1BQ5T0F9 858 aaKnown RBP23.27■■□□□ 1.32
LINC00887-203ENST00000429578 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.27■■□□□ 1.32
LINC00887-203ENST00000429578 PIK3C2AO00443 1686 aa23.26■■□□□ 1.31
LINC00887-203ENST00000429578 PRKRIP1Q9H875 184 aaPredicted RBP23.26■■□□□ 1.31
LINC00887-203ENST00000429578 NPHP3Q7Z494 1330 aa23.26■■□□□ 1.31
LINC00887-203ENST00000429578 TTC21AQ8NDW8 1320 aa23.26■■□□□ 1.31
LINC00887-203ENST00000429578 SHPRHQ149N8 1683 aa23.25■■□□□ 1.31
LINC00887-203ENST00000429578 FYB1O15117 783 aa23.25■■□□□ 1.31
LINC00887-203ENST00000429578 CNGB1Q14028 1251 aaPredicted RBP23.25■■□□□ 1.31
LINC00887-203ENST00000429578 POTEAQ6S8J7 498 aa23.25■■□□□ 1.31
LINC00887-203ENST00000429578 USP54Q70EL1 1684 aa23.24■■□□□ 1.31
LINC00887-203ENST00000429578 PARD3Q8TEW0 1356 aa23.24■■□□□ 1.31
LINC00887-203ENST00000429578 MEX3CQ5U5Q3 659 aaKnown RBP23.24■■□□□ 1.31
LINC00887-203ENST00000429578 LRP6O75581 1613 aa23.23■■□□□ 1.31
LINC00887-203ENST00000429578 DDX17Q92841 729 aaKnown RBP23.23■■□□□ 1.31
LINC00887-203ENST00000429578 PXDNQ92626 1479 aa23.23■■□□□ 1.31
LINC00887-203ENST00000429578 ALS2Q96Q42 1657 aa23.23■■□□□ 1.31
LINC00887-203ENST00000429578 RALBP1Q15311 655 aa23.22■■□□□ 1.31
LINC00887-203ENST00000429578 KRT28Q7Z3Y7 464 aa23.22■■□□□ 1.31
LINC00887-203ENST00000429578 MARF1Q9Y4F3 1742 aaKnown RBP23.22■■□□□ 1.31
LINC00887-203ENST00000429578 LRRC59Q96AG4 307 aaKnown RBP23.22■■□□□ 1.31
LINC00887-203ENST00000429578 XPCQ01831 940 aaPredicted RBP23.21■■□□□ 1.31
LINC00887-203ENST00000429578 NME9Q86XW9 330 aa23.21■■□□□ 1.31
LINC00887-203ENST00000429578 MIER1Q8N108 512 aa23.21■■□□□ 1.31
LINC00887-203ENST00000429578 GGNBP2Q9H3C7 697 aa23.21■■□□□ 1.31
LINC00887-203ENST00000429578 NUTM2BA6NNL0 878 aaPredicted RBP23.19■■□□□ 1.3
LINC00887-203ENST00000429578 NUTM2EB1AL46 878 aaPredicted RBP23.19■■□□□ 1.3
LINC00887-203ENST00000429578 PAK3O75914 559 aaPredicted RBP23.19■■□□□ 1.3
LINC00887-203ENST00000429578 NUTM2AQ8IVF1 878 aaPredicted RBP23.19■■□□□ 1.3
LINC00887-203ENST00000429578 MAP2P11137 1827 aaKnown RBP23.18■■□□□ 1.3
LINC00887-203ENST00000429578 SBNO1A3KN83 1393 aa23.18■■□□□ 1.3
LINC00887-203ENST00000429578 SOS2Q07890 1332 aaPredicted RBP23.17■■□□□ 1.3
LINC00887-203ENST00000429578 MORC1Q86VD1 984 aa23.17■■□□□ 1.3
LINC00887-203ENST00000429578 OVOS2A0A0J9YW53 1432 aa23.17■■□□□ 1.3
LINC00887-203ENST00000429578 OVOS2Q6IE36 1432 aa23.17■■□□□ 1.3
LINC00887-203ENST00000429578 USP31Q70CQ4 1352 aa23.17■■□□□ 1.3
LINC00887-203ENST00000429578 ABTB2Q8N961 1025 aa23.16■■□□□ 1.3
LINC00887-203ENST00000429578 COG3Q96JB2 828 aa23.15■■□□□ 1.3
LINC00887-203ENST00000429578 ZRANB1Q9UGI0 708 aa23.15■■□□□ 1.3
LINC00887-203ENST00000429578 TNS3Q68CZ2 1445 aa23.14■■□□□ 1.29
LINC00887-203ENST00000429578 MYBBP1AQ9BQG0 1328 aaKnown RBP23.14■■□□□ 1.29
LINC00887-203ENST00000429578 PNPLA6Q8IY17 1366 aa23.13■■□□□ 1.29
LINC00887-203ENST00000429578 ZNF772Q68DY9 489 aaPredicted RBP23.13■■□□□ 1.29
LINC00887-203ENST00000429578 NLRP6P59044 892 aa23.12■■□□□ 1.29
LINC00887-203ENST00000429578 SPATA31A3Q5VYP0 1347 aa23.12■■□□□ 1.29
LINC00887-203ENST00000429578 CRYBG1Q9Y4K1 1723 aa23.1■■□□□ 1.29
LINC00887-203ENST00000429578 PPP2R1AP30153 589 aa23.09■■□□□ 1.29
LINC00887-203ENST00000429578 NUTM2GQ5VZR2 741 aa23.09■■□□□ 1.29
LINC00887-203ENST00000429578 NLRP13Q86W25 1043 aa23.09■■□□□ 1.29
LINC00887-203ENST00000429578 ARHGEF10O15013 1369 aa23.08■■□□□ 1.29
LINC00887-203ENST00000429578 TNNT2P45379 298 aaPredicted RBP23.08■■□□□ 1.29
LINC00887-203ENST00000429578 LMOD2Q6P5Q4 547 aa23.08■■□□□ 1.29
LINC00887-203ENST00000429578 CCER2I3L3R5 266 aa23.08■■□□□ 1.28
LINC00887-203ENST00000429578 PHRF1Q9P1Y6 1649 aaKnown RBP23.08■■□□□ 1.28
LINC00887-203ENST00000429578 LTN1O94822 1766 aa23.06■■□□□ 1.28
LINC00887-203ENST00000429578 AATKQ6ZMQ8 1374 aa23.06■■□□□ 1.28
LINC00887-203ENST00000429578 SLIT3O75094 1523 aa23.06■■□□□ 1.28
LINC00887-203ENST00000429578 AFF2P51816 1311 aa23.05■■□□□ 1.28
LINC00887-203ENST00000429578 C8orf37Q96NL8 207 aa23.05■■□□□ 1.28
LINC00887-203ENST00000429578 ABCA3Q99758 1704 aa23.04■■□□□ 1.28
LINC00887-203ENST00000429578 USP19O94966 1318 aa23.04■■□□□ 1.28
LINC00887-203ENST00000429578 NFAT5O94916 1531 aa23.03■■□□□ 1.28
LINC00887-203ENST00000429578 ADAMTS2O95450 1211 aa23.02■■□□□ 1.28
LINC00887-203ENST00000429578 COL22A1Q8NFW1 1626 aaPredicted RBP23.02■■□□□ 1.28
LINC00887-203ENST00000429578 KCNH5Q8NCM2 988 aa23.02■■□□□ 1.28
LINC00887-203ENST00000429578 FBLN1P23142 703 aa23.01■■□□□ 1.27
LINC00887-203ENST00000429578 SMG6Q86US8 1419 aaKnown RBP23■■□□□ 1.27
LINC00887-203ENST00000429578 RXRBP28702 533 aa22.99■■□□□ 1.27
LINC00887-203ENST00000429578 MTHFSP49914 203 aa22.99■■□□□ 1.27
LINC00887-203ENST00000429578 CCDC184Q52MB2 194 aa22.99■■□□□ 1.27
LINC00887-203ENST00000429578 POLKQ9UBT6 870 aa22.99■■□□□ 1.27
LINC00887-203ENST00000429578 SOX12O15370 315 aa22.99■■□□□ 1.27
LINC00887-203ENST00000429578 PEAK1Q9H792 1746 aa22.98■■□□□ 1.27
LINC00887-203ENST00000429578 GCP02774 474 aa22.98■■□□□ 1.27
LINC00887-203ENST00000429578 NGLY1Q96IV0 654 aa22.98■■□□□ 1.27
LINC00887-203ENST00000429578 MRS2Q9HD23 443 aa22.98■■□□□ 1.27
LINC00887-203ENST00000429578 RRS1Q15050 365 aaKnown RBP22.96■■□□□ 1.27
LINC00887-203ENST00000429578 EMILIN1Q9Y6C2 1016 aa22.96■■□□□ 1.27
LINC00887-203ENST00000429578 CDK12Q9NYV4 1490 aaPredicted RBP22.96■■□□□ 1.27
LINC00887-203ENST00000429578 PLEKHG5O94827 1062 aa22.95■■□□□ 1.26
LINC00887-203ENST00000429578 MAP3K19Q56UN5 1328 aa22.94■■□□□ 1.26
LINC00887-203ENST00000429578 CABLES1Q8TDN4 633 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms