RNA–Protein interactions for RNA: ENST00000429436.6

MARK3-205, Transcript of microtubule affinity regulating kinase 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARK3, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-205ENST00000429436 C1orf115Q9H7X2 142 aa18.48■□□□□ 0.55
MARK3-205ENST00000429436 PRDM4Q9UKN5 801 aa18.48■□□□□ 0.55
MARK3-205ENST00000429436 ABCA6Q8N139 1617 aa18.48■□□□□ 0.55
MARK3-205ENST00000429436 TRAK2O60296 914 aa18.48■□□□□ 0.55
MARK3-205ENST00000429436 TMPOP42166 694 aaKnown RBP18.48■□□□□ 0.55
MARK3-205ENST00000429436 TMEM57Q8N5G2 664 aa18.48■□□□□ 0.55
MARK3-205ENST00000429436 PRDM10Q9NQV6 1147 aa18.48■□□□□ 0.55
MARK3-205ENST00000429436 KIAA1211Q6ZU35 1233 aa18.47■□□□□ 0.55
MARK3-205ENST00000429436 CEP152O94986 1710 aa18.47■□□□□ 0.55
MARK3-205ENST00000429436 HMOX1P09601 288 aa18.46■□□□□ 0.55
MARK3-205ENST00000429436 CDK11BP21127 795 aaKnown RBP18.46■□□□□ 0.55
MARK3-205ENST00000429436 CLASP1Q7Z460 1538 aa18.46■□□□□ 0.55
MARK3-205ENST00000429436 MCM4P33991 863 aa18.45■□□□□ 0.54
MARK3-205ENST00000429436 MAP3K4Q9Y6R4 1608 aa18.45■□□□□ 0.54
MARK3-205ENST00000429436 STAG3Q9UJ98 1225 aa18.44■□□□□ 0.54
MARK3-205ENST00000429436 ATF7IPQ6VMQ6 1270 aa18.44■□□□□ 0.54
MARK3-205ENST00000429436 PRAM1Q96QH2 718 aa18.44■□□□□ 0.54
MARK3-205ENST00000429436 GRPEL1Q9HAV7 217 aa18.44■□□□□ 0.54
MARK3-205ENST00000429436 VGFO15240 615 aaPredicted RBP18.43■□□□□ 0.54
MARK3-205ENST00000429436 TET3O43151 1660 aa18.43■□□□□ 0.54
MARK3-205ENST00000429436 TRIM35Q9UPQ4 493 aa18.43■□□□□ 0.54
MARK3-205ENST00000429436 IDI1Q13907 227 aa18.42■□□□□ 0.54
MARK3-205ENST00000429436 NINLQ9Y2I6 1382 aa18.42■□□□□ 0.54
MARK3-205ENST00000429436 ANP32BQ92688 251 aaKnown RBP18.42■□□□□ 0.54
MARK3-205ENST00000429436 ANTXR1Q9H6X2 564 aa18.42■□□□□ 0.54
MARK3-205ENST00000429436 PHF23Q9BUL5 403 aaPredicted RBP18.41■□□□□ 0.54
MARK3-205ENST00000429436 DDX19BQ9UMR2 479 aa18.41■□□□□ 0.54
MARK3-205ENST00000429436 PDCL3Q9H2J4 239 aa18.41■□□□□ 0.54
MARK3-205ENST00000429436 NPATQ14207 1427 aa18.4■□□□□ 0.54
MARK3-205ENST00000429436 ANKRD45Q5TZF3 282 aa18.4■□□□□ 0.54
MARK3-205ENST00000429436 CABP1Q9NZU7 370 aa18.4■□□□□ 0.54
MARK3-205ENST00000429436 SHROOM2Q13796 1616 aa18.4■□□□□ 0.54
MARK3-205ENST00000429436 FYB1O15117 783 aa18.4■□□□□ 0.54
MARK3-205ENST00000429436 DIAPH1O60610 1272 aaKnown RBP18.4■□□□□ 0.54
MARK3-205ENST00000429436 MRE11P49959 708 aa18.39■□□□□ 0.54
MARK3-205ENST00000429436 HSCBQ8IWL3 235 aa18.39■□□□□ 0.54
MARK3-205ENST00000429436 ASXL2Q76L83 1435 aa18.39■□□□□ 0.53
MARK3-205ENST00000429436 NCLP19338 710 aaKnown RBP18.39■□□□□ 0.53
MARK3-205ENST00000429436 PRKAR2BP31323 418 aa18.38■□□□□ 0.53
MARK3-205ENST00000429436 A0A1W2PP64 1363 aa18.38■□□□□ 0.53
MARK3-205ENST00000429436 KIF1BO60333 1816 aa18.38■□□□□ 0.53
MARK3-205ENST00000429436 ZNF518AQ6AHZ1 1483 aa18.38■□□□□ 0.53
MARK3-205ENST00000429436 MYOM2P54296 1465 aa18.38■□□□□ 0.53
MARK3-205ENST00000429436 FSD2A1L4K1 749 aa18.38■□□□□ 0.53
MARK3-205ENST00000429436 APBB1O00213 710 aa18.38■□□□□ 0.53
MARK3-205ENST00000429436 CCDC27Q2M243 656 aa18.38■□□□□ 0.53
MARK3-205ENST00000429436 R3HCC1Q9Y3T6 440 aaKnown RBP18.37■□□□□ 0.53
MARK3-205ENST00000429436 MROH2AA6NES4 1674 aa18.37■□□□□ 0.53
MARK3-205ENST00000429436 SECISBP2LQ93073 1101 aaKnown RBP18.36■□□□□ 0.53
MARK3-205ENST00000429436 TERF2IPQ9NYB0 399 aa18.36■□□□□ 0.53
MARK3-205ENST00000429436 ANKRD36BQ8N2N9 1353 aa18.36■□□□□ 0.53
MARK3-205ENST00000429436 HSP90AB1P08238 724 aaKnown RBP18.35■□□□□ 0.53
MARK3-205ENST00000429436 PLEKHF1Q96S99 279 aa18.35■□□□□ 0.53
MARK3-205ENST00000429436 FBXO31Q5XUX0 539 aaPredicted RBP18.35■□□□□ 0.53
MARK3-205ENST00000429436 GAS2L3Q86XJ1 694 aa18.35■□□□□ 0.53
MARK3-205ENST00000429436 SBNO2Q9Y2G9 1366 aa18.35■□□□□ 0.53
MARK3-205ENST00000429436 WAPLQ7Z5K2 1190 aa18.34■□□□□ 0.53
MARK3-205ENST00000429436 NLRP1Q9C000 1473 aa18.34■□□□□ 0.53
MARK3-205ENST00000429436 IPO8O15397 1037 aaKnown RBP18.33■□□□□ 0.53
MARK3-205ENST00000429436 TSPYL6Q8N831 410 aa18.33■□□□□ 0.53
MARK3-205ENST00000429436 PHACTR3Q96KR7 559 aa18.33■□□□□ 0.53
MARK3-205ENST00000429436 CDK19Q9BWU1 502 aa18.33■□□□□ 0.53
MARK3-205ENST00000429436 CHMP5Q9NZZ3 219 aa18.33■□□□□ 0.53
MARK3-205ENST00000429436 HDGFL2Q7Z4V5 671 aaPredicted RBP18.33■□□□□ 0.52
MARK3-205ENST00000429436 PPRC1Q5VV67 1664 aaKnown RBP18.33■□□□□ 0.52
MARK3-205ENST00000429436 CD109Q6YHK3 1445 aa18.33■□□□□ 0.52
MARK3-205ENST00000429436 SOX12O15370 315 aa18.33■□□□□ 0.52
MARK3-205ENST00000429436 SAMD1Q6SPF0 538 aaPredicted RBP18.33■□□□□ 0.52
MARK3-205ENST00000429436 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.52
MARK3-205ENST00000429436 EFCAB6Q5THR3 1501 aa18.33■□□□□ 0.52
MARK3-205ENST00000429436 UHRF1BP1LA0JNW5 1464 aa18.32■□□□□ 0.52
MARK3-205ENST00000429436 MLECQ14165 292 aa18.32■□□□□ 0.52
MARK3-205ENST00000429436 ZBTB40Q9NUA8 1239 aa18.32■□□□□ 0.52
MARK3-205ENST00000429436 DCTN1Q14203 1278 aa18.31■□□□□ 0.52
MARK3-205ENST00000429436 ZRANB1Q9UGI0 708 aa18.31■□□□□ 0.52
MARK3-205ENST00000429436 ZNF830Q96NB3 372 aaPredicted RBP18.31■□□□□ 0.52
MARK3-205ENST00000429436 IQSEC2Q5JU85 1478 aa18.31■□□□□ 0.52
MARK3-205ENST00000429436 TPM2P07951 284 aa18.31■□□□□ 0.52
MARK3-205ENST00000429436 SHPRHQ149N8 1683 aa18.3■□□□□ 0.52
MARK3-205ENST00000429436 CHD1LQ86WJ1 897 aa18.3■□□□□ 0.52
MARK3-205ENST00000429436 EMILIN1Q9Y6C2 1016 aa18.3■□□□□ 0.52
MARK3-205ENST00000429436 DEPDC5O75140 1603 aa18.3■□□□□ 0.52
MARK3-205ENST00000429436 NUTM2FA1L443 756 aa18.3■□□□□ 0.52
MARK3-205ENST00000429436 HDAC1Q13547 482 aaPredicted RBP18.3■□□□□ 0.52
MARK3-205ENST00000429436 C14orf37Q86TY3 774 aa18.3■□□□□ 0.52
MARK3-205ENST00000429436 MROH1Q8NDA8 1641 aa18.29■□□□□ 0.52
MARK3-205ENST00000429436 FAM83GA6ND36 823 aa18.29■□□□□ 0.52
MARK3-205ENST00000429436 QRICH2Q9H0J4 1663 aa18.29■□□□□ 0.52
MARK3-205ENST00000429436 MSNP26038 577 aaKnown RBP18.29■□□□□ 0.52
MARK3-205ENST00000429436 INO80Q9ULG1 1556 aaPredicted RBP18.29■□□□□ 0.52
MARK3-205ENST00000429436 ATAD2Q6PL18 1390 aa18.28■□□□□ 0.52
MARK3-205ENST00000429436 RPGRIP1LQ68CZ1 1315 aa18.28■□□□□ 0.52
MARK3-205ENST00000429436 DNTTIP2Q5QJE6 756 aaKnown RBP18.28■□□□□ 0.52
MARK3-205ENST00000429436 SMC5Q8IY18 1101 aa18.28■□□□□ 0.52
MARK3-205ENST00000429436 VWDEQ8N2E2 1590 aa18.28■□□□□ 0.52
MARK3-205ENST00000429436 KIF16BQ96L93 1317 aa18.27■□□□□ 0.52
MARK3-205ENST00000429436 NCKAP5LQ9HCH0 1330 aa18.27■□□□□ 0.52
MARK3-205ENST00000429436 RRS1Q15050 365 aaKnown RBP18.27■□□□□ 0.52
MARK3-205ENST00000429436 KIAA1210Q9ULL0 1709 aa18.26■□□□□ 0.51
MARK3-205ENST00000429436 NUCB1Q02818 461 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms