RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 MVPQ14764 893 aaKnown RBP11.22□□□□□ -0.61
CDH13-202ENST00000428848 CFAP53Q96M91 514 aa11.22□□□□□ -0.61
CDH13-202ENST00000428848 MYH16Q9H6N6 1097 aa11.22□□□□□ -0.61
CDH13-202ENST00000428848 NEXMIFQ5QGS0 1516 aa11.22□□□□□ -0.61
CDH13-202ENST00000428848 TNNT2P45379 298 aaPredicted RBP11.21□□□□□ -0.61
CDH13-202ENST00000428848 TBC1D2Q9BYX2 928 aa11.21□□□□□ -0.61
CDH13-202ENST00000428848 POGKQ9P215 609 aa11.21□□□□□ -0.61
CDH13-202ENST00000428848 IDI1Q13907 227 aa11.21□□□□□ -0.62
CDH13-202ENST00000428848 L1TD1Q5T7N2 865 aaKnown RBP11.21□□□□□ -0.62
CDH13-202ENST00000428848 COL3A1P02461 1466 aaPredicted RBP11.2□□□□□ -0.62
CDH13-202ENST00000428848 BCL2L13Q9BXK5 485 aa11.2□□□□□ -0.62
CDH13-202ENST00000428848 RRP9O43818 475 aaKnown RBP11.2□□□□□ -0.62
CDH13-202ENST00000428848 ZKSCAN2Q63HK3 967 aa11.2□□□□□ -0.62
CDH13-202ENST00000428848 TMEM132EQ6IEE7 984 aa11.2□□□□□ -0.62
CDH13-202ENST00000428848 UPF2Q9HAU5 1272 aaKnown RBP11.2□□□□□ -0.62
CDH13-202ENST00000428848 ANKRD26Q9UPS8 1709 aa11.19□□□□□ -0.62
CDH13-202ENST00000428848 PLEKHF1Q96S99 279 aa11.19□□□□□ -0.62
CDH13-202ENST00000428848 SLKQ9H2G2 1235 aaPredicted RBP11.19□□□□□ -0.62
CDH13-202ENST00000428848 STAG3Q9UJ98 1225 aa11.19□□□□□ -0.62
CDH13-202ENST00000428848 PTPRMP28827 1452 aa11.19□□□□□ -0.62
CDH13-202ENST00000428848 ADAMTSL3P82987 1691 aa11.19□□□□□ -0.62
CDH13-202ENST00000428848 HDAC1Q13547 482 aaPredicted RBP11.18□□□□□ -0.62
CDH13-202ENST00000428848 DZIP1LQ8IYY4 767 aaKnown RBP11.18□□□□□ -0.62
CDH13-202ENST00000428848 ZMYND15Q9H091 742 aa11.18□□□□□ -0.62
CDH13-202ENST00000428848 TMEM131LA2VDJ0 1609 aa11.18□□□□□ -0.62
CDH13-202ENST00000428848 ABCC11Q96J66 1382 aa11.18□□□□□ -0.62
CDH13-202ENST00000428848 ARHGEF40Q8TER5 1519 aa11.17□□□□□ -0.62
CDH13-202ENST00000428848 MLECQ14165 292 aa11.17□□□□□ -0.62
CDH13-202ENST00000428848 RRAGDQ9NQL2 400 aaPredicted RBP11.17□□□□□ -0.62
CDH13-202ENST00000428848 U2AF1L5P0DN76 240 aaPredicted RBP11.17□□□□□ -0.62
CDH13-202ENST00000428848 U2AF1Q01081 240 aaKnown RBP eCLIP11.17□□□□□ -0.62
CDH13-202ENST00000428848 PLPPR3Q6T4P5 718 aa11.17□□□□□ -0.62
CDH13-202ENST00000428848 ESF1Q9H501 851 aaKnown RBP11.17□□□□□ -0.62
CDH13-202ENST00000428848 TRIM35Q9UPQ4 493 aa11.17□□□□□ -0.62
CDH13-202ENST00000428848 IL16Q14005 1332 aa11.16□□□□□ -0.62
CDH13-202ENST00000428848 MED14O60244 1454 aa11.16□□□□□ -0.62
CDH13-202ENST00000428848 SMC5Q8IY18 1101 aa11.16□□□□□ -0.62
CDH13-202ENST00000428848 VSIG10Q8N0Z9 540 aa11.16□□□□□ -0.62
CDH13-202ENST00000428848 TRIM27P14373 513 aa11.16□□□□□ -0.62
CDH13-202ENST00000428848 TMPOP42166 694 aaKnown RBP11.16□□□□□ -0.62
CDH13-202ENST00000428848 CLTCQ00610 1675 aaKnown RBP11.15□□□□□ -0.62
CDH13-202ENST00000428848 HDGFP51858 240 aaKnown RBP11.15□□□□□ -0.62
CDH13-202ENST00000428848 EXOSC9Q06265 439 aaKnown RBP11.15□□□□□ -0.62
CDH13-202ENST00000428848 A0A1W2PP64 1363 aa11.15□□□□□ -0.62
CDH13-202ENST00000428848 HSP90AA2PQ14568 343 aaPredicted RBP11.14□□□□□ -0.63
CDH13-202ENST00000428848 FTSJ3Q8IY81 847 aaKnown RBP11.14□□□□□ -0.63
CDH13-202ENST00000428848 SSH1Q8WYL5 1049 aa11.14□□□□□ -0.63
CDH13-202ENST00000428848 TSR2Q969E8 191 aaKnown RBP11.14□□□□□ -0.63
CDH13-202ENST00000428848 DDX19BQ9UMR2 479 aa11.14□□□□□ -0.63
CDH13-202ENST00000428848 MYO5BQ9ULV0 1848 aa11.14□□□□□ -0.63
CDH13-202ENST00000428848 ATAD2Q6PL18 1390 aa11.14□□□□□ -0.63
CDH13-202ENST00000428848 SPATA31D1Q6ZQQ2 1576 aa11.14□□□□□ -0.63
CDH13-202ENST00000428848 FSD2A1L4K1 749 aa11.14□□□□□ -0.63
CDH13-202ENST00000428848 CLCN1P35523 988 aa11.14□□□□□ -0.63
CDH13-202ENST00000428848 ATF7IPQ6VMQ6 1270 aa11.14□□□□□ -0.63
CDH13-202ENST00000428848 C22orf23Q9BZE7 217 aa11.14□□□□□ -0.63
CDH13-202ENST00000428848 CD163L1Q9NR16 1453 aa11.13□□□□□ -0.63
CDH13-202ENST00000428848 HSP90AA1P07900 732 aaKnown RBP11.13□□□□□ -0.63
CDH13-202ENST00000428848 MCM4P33991 863 aa11.13□□□□□ -0.63
CDH13-202ENST00000428848 ILDR1Q86SU0 546 aaPredicted RBP11.13□□□□□ -0.63
CDH13-202ENST00000428848 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDH13-202ENST00000428848 CABP2Q9NPB3 220 aa11.13□□□□□ -0.63
CDH13-202ENST00000428848 SMC4Q9NTJ3 1288 aa11.13□□□□□ -0.63
CDH13-202ENST00000428848 NCOA3Q9Y6Q9 1424 aa11.13□□□□□ -0.63
CDH13-202ENST00000428848 PNPLA6Q8IY17 1366 aa11.13□□□□□ -0.63
CDH13-202ENST00000428848 ZNF692Q9BU19 519 aaPredicted RBP11.13□□□□□ -0.63
CDH13-202ENST00000428848 ZBTB40Q9NUA8 1239 aa11.13□□□□□ -0.63
CDH13-202ENST00000428848 TERF2IPQ9NYB0 399 aa11.13□□□□□ -0.63
CDH13-202ENST00000428848 CDC42BPGQ6DT37 1551 aa11.12□□□□□ -0.63
CDH13-202ENST00000428848 PNNQ9H307 717 aaKnown RBP11.12□□□□□ -0.63
CDH13-202ENST00000428848 CHMP5Q9NZZ3 219 aa11.12□□□□□ -0.63
CDH13-202ENST00000428848 YTHDC2Q9H6S0 1430 aaKnown RBP11.11□□□□□ -0.63
CDH13-202ENST00000428848 DDIT3P35638 169 aa11.11□□□□□ -0.63
CDH13-202ENST00000428848 NUTM2DQ5VT03 806 aaPredicted RBP11.11□□□□□ -0.63
CDH13-202ENST00000428848 NOB1Q9ULX3 412 aaKnown RBP11.11□□□□□ -0.63
CDH13-202ENST00000428848 RIMS1Q86UR5 1692 aaKnown RBP11.11□□□□□ -0.63
CDH13-202ENST00000428848 FYB1O15117 783 aa11.1□□□□□ -0.63
CDH13-202ENST00000428848 BRPF1P55201 1214 aaPredicted RBP11.1□□□□□ -0.63
CDH13-202ENST00000428848 SRPK2P78362 688 aaKnown RBP11.1□□□□□ -0.63
CDH13-202ENST00000428848 TMEM57Q8N5G2 664 aa11.1□□□□□ -0.63
CDH13-202ENST00000428848 NAP1L5Q96NT1 182 aaPredicted RBP11.1□□□□□ -0.63
CDH13-202ENST00000428848 RBM25P49756 843 aaKnown RBP11.1□□□□□ -0.63
CDH13-202ENST00000428848 MFAP1P55081 439 aaKnown RBP11.1□□□□□ -0.63
CDH13-202ENST00000428848 ALDH1L2Q3SY69 923 aa11.1□□□□□ -0.63
CDH13-202ENST00000428848 KIF20BQ96Q89 1820 aa11.09□□□□□ -0.63
CDH13-202ENST00000428848 PPIP5K1Q6PFW1 1433 aa11.09□□□□□ -0.63
CDH13-202ENST00000428848 XRCC6P12956 609 aaKnown RBP eCLIP11.09□□□□□ -0.63
CDH13-202ENST00000428848 NUCB1Q02818 461 aa11.09□□□□□ -0.63
CDH13-202ENST00000428848 FBXO31Q5XUX0 539 aaPredicted RBP11.09□□□□□ -0.63
CDH13-202ENST00000428848 ITPRIPQ8IWB1 547 aa11.09□□□□□ -0.63
CDH13-202ENST00000428848 SNX21Q969T3 373 aa11.09□□□□□ -0.63
CDH13-202ENST00000428848 GGNBP2Q9H3C7 697 aa11.09□□□□□ -0.63
CDH13-202ENST00000428848 KIF16BQ96L93 1317 aa11.09□□□□□ -0.63
CDH13-202ENST00000428848 U2SURPO15042 1029 aaKnown RBP11.09□□□□□ -0.63
CDH13-202ENST00000428848 HDGFL2Q7Z4V5 671 aaPredicted RBP11.09□□□□□ -0.63
CDH13-202ENST00000428848 STK26Q9P289 416 aa11.09□□□□□ -0.63
CDH13-202ENST00000428848 ALKQ9UM73 1620 aa11.08□□□□□ -0.64
CDH13-202ENST00000428848 CEBPAP49715 358 aaPredicted RBP11.08□□□□□ -0.64
CDH13-202ENST00000428848 HSPA2P54652 639 aa11.08□□□□□ -0.64
CDH13-202ENST00000428848 RIPK4P57078 832 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms