RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ONECUT3O60422 494 aaPredicted RBP22.54■■□□□ 1.2
SEC13-210ENST00000428626 PAK3O75914 559 aaPredicted RBP22.53■■□□□ 1.2
SEC13-210ENST00000428626 BTG4Q9NY30 223 aa22.53■■□□□ 1.2
SEC13-210ENST00000428626 COL14A1Q05707 1796 aaKnown RBP22.52■■□□□ 1.2
SEC13-210ENST00000428626 POLR3AO14802 1390 aaPredicted RBP22.51■■□□□ 1.19
SEC13-210ENST00000428626 L3MBTL2Q969R5 705 aa22.51■■□□□ 1.19
SEC13-210ENST00000428626 CCDC9Q9Y3X0 531 aaKnown RBP22.51■■□□□ 1.19
SEC13-210ENST00000428626 SIN3AQ96ST3 1273 aa22.5■■□□□ 1.19
SEC13-210ENST00000428626 SRCAPQ6ZRS2 3230 aa22.5■■□□□ 1.19
SEC13-210ENST00000428626 ACEP12821 1306 aa22.5■■□□□ 1.19
SEC13-210ENST00000428626 PLEKHG3A1L390 1219 aa22.48■■□□□ 1.19
SEC13-210ENST00000428626 NBPF8Q3BBV2 869 aa22.48■■□□□ 1.19
SEC13-210ENST00000428626 NUTM2GQ5VZR2 741 aa22.48■■□□□ 1.19
SEC13-210ENST00000428626 CCDC125Q86Z20 511 aa22.48■■□□□ 1.19
SEC13-210ENST00000428626 CCDC61Q9Y6R9 512 aa22.48■■□□□ 1.19
SEC13-210ENST00000428626 PHRF1Q9P1Y6 1649 aaKnown RBP22.48■■□□□ 1.19
SEC13-210ENST00000428626 FAM98CQ17RN3 349 aaKnown RBP22.46■■□□□ 1.19
SEC13-210ENST00000428626 CENPJQ9HC77 1338 aaPredicted RBP22.46■■□□□ 1.19
SEC13-210ENST00000428626 BLMP54132 1417 aaPredicted RBP22.46■■□□□ 1.19
SEC13-210ENST00000428626 KRT27Q7Z3Y8 459 aa22.45■■□□□ 1.18
SEC13-210ENST00000428626 PRDM11Q9NQV5 511 aa22.45■■□□□ 1.18
SEC13-210ENST00000428626 KIAA0232Q92628 1395 aa22.45■■□□□ 1.18
SEC13-210ENST00000428626 QRICH2Q9H0J4 1663 aa22.45■■□□□ 1.18
SEC13-210ENST00000428626 CHRNA2Q15822 529 aa22.44■■□□□ 1.18
SEC13-210ENST00000428626 DEFB132Q7Z7B7 95 aa22.44■■□□□ 1.18
SEC13-210ENST00000428626 CABP2Q9NPB3 220 aa22.44■■□□□ 1.18
SEC13-210ENST00000428626 SPATA31A5Q5VU36 1347 aa22.43■■□□□ 1.18
SEC13-210ENST00000428626 SPATA31A7Q8IWB4 1347 aa22.43■■□□□ 1.18
SEC13-210ENST00000428626 TRPM1Q7Z4N2 1603 aa22.42■■□□□ 1.18
SEC13-210ENST00000428626 ZC3H6P61129 1189 aaKnown RBP22.42■■□□□ 1.18
SEC13-210ENST00000428626 PPIP5K1Q6PFW1 1433 aa22.41■■□□□ 1.18
SEC13-210ENST00000428626 SRPK2P78362 688 aaKnown RBP22.41■■□□□ 1.18
SEC13-210ENST00000428626 NRKQ7Z2Y5 1582 aa22.41■■□□□ 1.18
SEC13-210ENST00000428626 THSD7AQ9UPZ6 1657 aa22.4■■□□□ 1.18
SEC13-210ENST00000428626 NEUROD1Q13562 356 aa22.4■■□□□ 1.18
SEC13-210ENST00000428626 A0A0G2JS52 829 aa22.39■■□□□ 1.17
SEC13-210ENST00000428626 MYT1Q01538 1121 aa22.39■■□□□ 1.17
SEC13-210ENST00000428626 FAM182BQ5T319 152 aa22.38■■□□□ 1.17
SEC13-210ENST00000428626 ZRANB1Q9UGI0 708 aa22.38■■□□□ 1.17
SEC13-210ENST00000428626 USP19O94966 1318 aa22.37■■□□□ 1.17
SEC13-210ENST00000428626 ABTB2Q8N961 1025 aa22.37■■□□□ 1.17
SEC13-210ENST00000428626 SPATA31A1Q5TZJ5 1347 aa22.36■■□□□ 1.17
SEC13-210ENST00000428626 CAMTA1Q9Y6Y1 1673 aa22.36■■□□□ 1.17
SEC13-210ENST00000428626 STRN4Q9NRL3 753 aa22.35■■□□□ 1.17
SEC13-210ENST00000428626 CABP1Q9NZU7 370 aa22.35■■□□□ 1.17
SEC13-210ENST00000428626 LMO7Q8WWI1 1683 aa22.34■■□□□ 1.17
SEC13-210ENST00000428626 USP6P35125 1406 aa22.32■■□□□ 1.16
SEC13-210ENST00000428626 ROCK2O75116 1388 aaKnown RBP22.32■■□□□ 1.16
SEC13-210ENST00000428626 CPDO75976 1380 aa22.32■■□□□ 1.16
SEC13-210ENST00000428626 SSH2Q76I76 1423 aa22.31■■□□□ 1.16
SEC13-210ENST00000428626 GCP02774 474 aa22.3■■□□□ 1.16
SEC13-210ENST00000428626 SF3B2Q13435 895 aaKnown RBP22.3■■□□□ 1.16
SEC13-210ENST00000428626 LARP1Q6PKG0 1096 aaKnown RBP22.29■■□□□ 1.16
SEC13-210ENST00000428626 NLRP13Q86W25 1043 aa22.29■■□□□ 1.16
SEC13-210ENST00000428626 USP35Q9P2H5 1018 aa22.29■■□□□ 1.16
SEC13-210ENST00000428626 EVC2Q86UK5 1308 aa22.29■■□□□ 1.16
SEC13-210ENST00000428626 BRD4O60885 1362 aaPredicted RBP22.27■■□□□ 1.16
SEC13-210ENST00000428626 PIK3C2AO00443 1686 aa22.27■■□□□ 1.16
SEC13-210ENST00000428626 SLIT3O75094 1523 aa22.26■■□□□ 1.15
SEC13-210ENST00000428626 TNS1Q9HBL0 1735 aaKnown RBP22.26■■□□□ 1.15
SEC13-210ENST00000428626 RGPD1P0DJD0 1748 aa22.26■■□□□ 1.15
SEC13-210ENST00000428626 EVA1CP58658 441 aa22.25■■□□□ 1.15
SEC13-210ENST00000428626 COL5A2P05997 1499 aaPredicted RBP22.24■■□□□ 1.15
SEC13-210ENST00000428626 BAG6P46379 1132 aa22.24■■□□□ 1.15
SEC13-210ENST00000428626 NLRP6P59044 892 aa22.24■■□□□ 1.15
SEC13-210ENST00000428626 EN1Q05925 392 aaPredicted RBP22.24■■□□□ 1.15
SEC13-210ENST00000428626 BARGINQ6ZT62 677 aa22.24■■□□□ 1.15
SEC13-210ENST00000428626 AKAP12Q02952 1782 aa22.23■■□□□ 1.15
SEC13-210ENST00000428626 COL18A1P39060 1754 aa22.22■■□□□ 1.15
SEC13-210ENST00000428626 TCP11L2Q8N4U5 519 aa22.21■■□□□ 1.15
SEC13-210ENST00000428626 ZBTB7CA1YPR0 619 aa22.2■■□□□ 1.14
SEC13-210ENST00000428626 TTC21BQ7Z4L5 1316 aa22.2■■□□□ 1.14
SEC13-210ENST00000428626 DISP2A7MBM2 1401 aa22.2■■□□□ 1.14
SEC13-210ENST00000428626 CPSF1Q10570 1443 aaKnown RBP22.2■■□□□ 1.14
SEC13-210ENST00000428626 PSDA5PKW4 1024 aaPredicted RBP22.19■■□□□ 1.14
SEC13-210ENST00000428626 TRIM37O94972 964 aa22.19■■□□□ 1.14
SEC13-210ENST00000428626 AATKQ6ZMQ8 1374 aa22.19■■□□□ 1.14
SEC13-210ENST00000428626 AXIN2Q9Y2T1 843 aa22.18■■□□□ 1.14
SEC13-210ENST00000428626 SBNO2Q9Y2G9 1366 aa22.17■■□□□ 1.14
SEC13-210ENST00000428626 FAM196AQ6ZSG2 479 aa22.17■■□□□ 1.14
SEC13-210ENST00000428626 CRB1P82279 1406 aa22.16■■□□□ 1.14
SEC13-210ENST00000428626 EZH2Q15910 746 aaKnown RBP22.16■■□□□ 1.14
SEC13-210ENST00000428626 CARD11Q9BXL7 1154 aa22.16■■□□□ 1.14
SEC13-210ENST00000428626 PARP4Q9UKK3 1724 aaKnown RBP22.16■■□□□ 1.14
SEC13-210ENST00000428626 CAMKK2Q96RR4 588 aa22.15■■□□□ 1.14
SEC13-210ENST00000428626 ZNF692Q9BU19 519 aaPredicted RBP22.15■■□□□ 1.14
SEC13-210ENST00000428626 THRAP3Q9Y2W1 955 aaKnown RBP22.15■■□□□ 1.14
SEC13-210ENST00000428626 CD163L1Q9NR16 1453 aa22.15■■□□□ 1.14
SEC13-210ENST00000428626 MON2Q7Z3U7 1717 aa22.14■■□□□ 1.14
SEC13-210ENST00000428626 PDE3BQ13370 1112 aa22.14■■□□□ 1.13
SEC13-210ENST00000428626 ARHGEF25Q86VW2 580 aa22.14■■□□□ 1.13
SEC13-210ENST00000428626 RGPD5Q99666 1765 aa22.14■■□□□ 1.13
SEC13-210ENST00000428626 KTN1Q86UP2 1357 aaKnown RBP22.13■■□□□ 1.13
SEC13-210ENST00000428626 NFAT5O94916 1531 aa22.13■■□□□ 1.13
SEC13-210ENST00000428626 TONSLQ96HA7 1378 aa22.12■■□□□ 1.13
SEC13-210ENST00000428626 TTC21AQ8NDW8 1320 aa22.12■■□□□ 1.13
SEC13-210ENST00000428626 SOX12O15370 315 aa22.12■■□□□ 1.13
SEC13-210ENST00000428626 LRP5O75197 1615 aa22.11■■□□□ 1.13
SEC13-210ENST00000428626 LRRC37A3O60309 1634 aa22.1■■□□□ 1.13
SEC13-210ENST00000428626 APBA3O96018 575 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms