RNA–Protein interactions for RNA: ENST00000428336.5

TSPO-204, Transcript of translocator protein, humanhuman

TSL 5

Gene TSPO, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-204ENST00000428336 VPS72Q15906 364 aa22.08■■□□□ 1.13
TSPO-204ENST00000428336 TRPM1Q7Z4N2 1603 aa22.08■■□□□ 1.13
TSPO-204ENST00000428336 ABCA3Q99758 1704 aa22.08■■□□□ 1.12
TSPO-204ENST00000428336 ITSN1Q15811 1721 aa22.06■■□□□ 1.12
TSPO-204ENST00000428336 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.06■■□□□ 1.12
TSPO-204ENST00000428336 TOPAZ1Q8N9V7 1692 aa22.06■■□□□ 1.12
TSPO-204ENST00000428336 ATAD2Q6PL18 1390 aa22.05■■□□□ 1.12
TSPO-204ENST00000428336 PPIP5K1Q6PFW1 1433 aa22.05■■□□□ 1.12
TSPO-204ENST00000428336 GLI3P10071 1580 aa22.04■■□□□ 1.12
TSPO-204ENST00000428336 NUTM2GQ5VZR2 741 aa22.04■■□□□ 1.12
TSPO-204ENST00000428336 BTG4Q9NY30 223 aa22.04■■□□□ 1.12
TSPO-204ENST00000428336 CABP1Q9NZU7 370 aa22.03■■□□□ 1.12
TSPO-204ENST00000428336 EVC2Q86UK5 1308 aa22.03■■□□□ 1.12
TSPO-204ENST00000428336 QRICH2Q9H0J4 1663 aa22.02■■□□□ 1.12
TSPO-204ENST00000428336 ONECUT3O60422 494 aaPredicted RBP22.02■■□□□ 1.12
TSPO-204ENST00000428336 TONSLQ96HA7 1378 aa22.01■■□□□ 1.11
TSPO-204ENST00000428336 PRDM11Q9NQV5 511 aa22.01■■□□□ 1.11
TSPO-204ENST00000428336 CCDC9Q9Y3X0 531 aaKnown RBP22.01■■□□□ 1.11
TSPO-204ENST00000428336 NWD2Q9ULI1 1742 aa22■■□□□ 1.11
TSPO-204ENST00000428336 ABTB2Q8N961 1025 aa22■■□□□ 1.11
TSPO-204ENST00000428336 PLCH1Q4KWH8 1693 aa22■■□□□ 1.11
TSPO-204ENST00000428336 SEPT12Q8IYM1 358 aa21.99■■□□□ 1.11
TSPO-204ENST00000428336 CARD11Q9BXL7 1154 aa21.99■■□□□ 1.11
TSPO-204ENST00000428336 CRYBG1Q9Y4K1 1723 aa21.99■■□□□ 1.11
TSPO-204ENST00000428336 KIAA0232Q92628 1395 aa21.99■■□□□ 1.11
TSPO-204ENST00000428336 ZC3H6P61129 1189 aaKnown RBP21.97■■□□□ 1.11
TSPO-204ENST00000428336 USP19O94966 1318 aa21.97■■□□□ 1.11
TSPO-204ENST00000428336 BRD4O60885 1362 aaPredicted RBP21.97■■□□□ 1.11
TSPO-204ENST00000428336 CHRNA2Q15822 529 aa21.96■■□□□ 1.11
TSPO-204ENST00000428336 COL14A1Q05707 1796 aaKnown RBP21.96■■□□□ 1.11
TSPO-204ENST00000428336 USP6P35125 1406 aa21.95■■□□□ 1.1
TSPO-204ENST00000428336 NLRP13Q86W25 1043 aa21.94■■□□□ 1.1
TSPO-204ENST00000428336 SPATA31A5Q5VU36 1347 aa21.94■■□□□ 1.1
TSPO-204ENST00000428336 SPATA31A7Q8IWB4 1347 aa21.94■■□□□ 1.1
TSPO-204ENST00000428336 SSH2Q76I76 1423 aa21.94■■□□□ 1.1
TSPO-204ENST00000428336 NRAPQ86VF7 1730 aa21.94■■□□□ 1.1
TSPO-204ENST00000428336 SBNO2Q9Y2G9 1366 aa21.93■■□□□ 1.1
TSPO-204ENST00000428336 FAM98CQ17RN3 349 aaKnown RBP21.92■■□□□ 1.1
TSPO-204ENST00000428336 CPDO75976 1380 aa21.91■■□□□ 1.1
TSPO-204ENST00000428336 GCP02774 474 aa21.91■■□□□ 1.1
TSPO-204ENST00000428336 CCDC125Q86Z20 511 aa21.91■■□□□ 1.1
TSPO-204ENST00000428336 PHRF1Q9P1Y6 1649 aaKnown RBP21.91■■□□□ 1.1
TSPO-204ENST00000428336 ZNF692Q9BU19 519 aaPredicted RBP21.9■■□□□ 1.1
TSPO-204ENST00000428336 NLRP6P59044 892 aa21.89■■□□□ 1.09
TSPO-204ENST00000428336 KRT27Q7Z3Y8 459 aa21.89■■□□□ 1.09
TSPO-204ENST00000428336 NRKQ7Z2Y5 1582 aa21.88■■□□□ 1.09
TSPO-204ENST00000428336 STRN4Q9NRL3 753 aa21.88■■□□□ 1.09
TSPO-204ENST00000428336 SPATA31A1Q5TZJ5 1347 aa21.87■■□□□ 1.09
TSPO-204ENST00000428336 TTC21BQ7Z4L5 1316 aa21.87■■□□□ 1.09
TSPO-204ENST00000428336 A0A0G2JS52 829 aa21.87■■□□□ 1.09
TSPO-204ENST00000428336 MYT1Q01538 1121 aa21.87■■□□□ 1.09
TSPO-204ENST00000428336 CPSF1Q10570 1443 aaKnown RBP21.87■■□□□ 1.09
TSPO-204ENST00000428336 EP400Q96L91 3159 aa21.86■■□□□ 1.09
TSPO-204ENST00000428336 CAMTA1Q9Y6Y1 1673 aa21.85■■□□□ 1.09
TSPO-204ENST00000428336 BLMP54132 1417 aaPredicted RBP21.84■■□□□ 1.09
TSPO-204ENST00000428336 EVA1CP58658 441 aa21.84■■□□□ 1.09
TSPO-204ENST00000428336 BRWD3Q6RI45 1802 aa21.84■■□□□ 1.09
TSPO-204ENST00000428336 LARP1Q6PKG0 1096 aaKnown RBP21.83■■□□□ 1.09
TSPO-204ENST00000428336 TESK2Q96S53 571 aa21.82■■□□□ 1.08
TSPO-204ENST00000428336 TTC21AQ8NDW8 1320 aa21.81■■□□□ 1.08
TSPO-204ENST00000428336 SLIT3O75094 1523 aa21.81■■□□□ 1.08
TSPO-204ENST00000428336 ST20-MTHFSA0A0A6YYL1 179 aa21.81■■□□□ 1.08
TSPO-204ENST00000428336 PUS7Q96PZ0 661 aaKnown RBP21.81■■□□□ 1.08
TSPO-204ENST00000428336 KTN1Q86UP2 1357 aaKnown RBP21.81■■□□□ 1.08
TSPO-204ENST00000428336 LMO7Q8WWI1 1683 aa21.8■■□□□ 1.08
TSPO-204ENST00000428336 SLC12A5Q9H2X9 1139 aa21.8■■□□□ 1.08
TSPO-204ENST00000428336 USP35Q9P2H5 1018 aa21.8■■□□□ 1.08
TSPO-204ENST00000428336 CD163L1Q9NR16 1453 aa21.79■■□□□ 1.08
TSPO-204ENST00000428336 AATKQ6ZMQ8 1374 aa21.79■■□□□ 1.08
TSPO-204ENST00000428336 BARGINQ6ZT62 677 aa21.79■■□□□ 1.08
TSPO-204ENST00000428336 PIK3C2AO00443 1686 aa21.79■■□□□ 1.08
TSPO-204ENST00000428336 THSD7AQ9UPZ6 1657 aa21.79■■□□□ 1.08
TSPO-204ENST00000428336 ZBTB7CA1YPR0 619 aa21.78■■□□□ 1.08
TSPO-204ENST00000428336 FAM182BQ5T319 152 aa21.78■■□□□ 1.08
TSPO-204ENST00000428336 DEFB132Q7Z7B7 95 aa21.78■■□□□ 1.08
TSPO-204ENST00000428336 TMC1Q8TDI8 760 aa21.78■■□□□ 1.08
TSPO-204ENST00000428336 ARHGEF25Q86VW2 580 aa21.77■■□□□ 1.08
TSPO-204ENST00000428336 TCP11L2Q8N4U5 519 aa21.77■■□□□ 1.08
TSPO-204ENST00000428336 COL5A2P05997 1499 aaPredicted RBP21.77■■□□□ 1.07
TSPO-204ENST00000428336 SF3B2Q13435 895 aaKnown RBP21.76■■□□□ 1.07
TSPO-204ENST00000428336 KCNH5Q8NCM2 988 aa21.76■■□□□ 1.07
TSPO-204ENST00000428336 PCGF6Q9BYE7 350 aa21.76■■□□□ 1.07
TSPO-204ENST00000428336 AKAP12Q02952 1782 aa21.76■■□□□ 1.07
TSPO-204ENST00000428336 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.75■■□□□ 1.07
TSPO-204ENST00000428336 ZRANB1Q9UGI0 708 aa21.75■■□□□ 1.07
TSPO-204ENST00000428336 AXIN2Q9Y2T1 843 aa21.75■■□□□ 1.07
TSPO-204ENST00000428336 HDGFL2Q7Z4V5 671 aaPredicted RBP21.74■■□□□ 1.07
TSPO-204ENST00000428336 THRAP3Q9Y2W1 955 aaKnown RBP21.74■■□□□ 1.07
TSPO-204ENST00000428336 CLSPNQ9HAW4 1339 aa21.74■■□□□ 1.07
TSPO-204ENST00000428336 USP31Q70CQ4 1352 aa21.74■■□□□ 1.07
TSPO-204ENST00000428336 SOX12O15370 315 aa21.73■■□□□ 1.07
TSPO-204ENST00000428336 NME9Q86XW9 330 aa21.73■■□□□ 1.07
TSPO-204ENST00000428336 TIMELESSQ9UNS1 1208 aa21.73■■□□□ 1.07
TSPO-204ENST00000428336 SLC24A1O60721 1099 aa21.72■■□□□ 1.07
TSPO-204ENST00000428336 TERF2IPQ9NYB0 399 aa21.72■■□□□ 1.07
TSPO-204ENST00000428336 A0A1W2PP64 1363 aa21.71■■□□□ 1.07
TSPO-204ENST00000428336 USP47Q96K76 1375 aa21.71■■□□□ 1.07
TSPO-204ENST00000428336 CRB1P82279 1406 aa21.71■■□□□ 1.07
TSPO-204ENST00000428336 MON2Q7Z3U7 1717 aa21.69■■□□□ 1.06
TSPO-204ENST00000428336 FAM196AQ6ZSG2 479 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms