RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 SMARCA5O60264 1052 aaPredicted RBP4.44□□□□□ -1.7
RGPD1-203ENST00000428128 MRRFQ96E11 262 aaKnown RBP4.44□□□□□ -1.7
RGPD1-203ENST00000428128 NWD2Q9ULI1 1742 aa4.44□□□□□ -1.7
RGPD1-203ENST00000428128 TRPM1Q7Z4N2 1603 aa4.44□□□□□ -1.7
RGPD1-203ENST00000428128 IRF6O14896 467 aa4.44□□□□□ -1.7
RGPD1-203ENST00000428128 EVX2Q03828 476 aa4.44□□□□□ -1.7
RGPD1-203ENST00000428128 SKIV2LQ15477 1246 aaKnown RBP4.44□□□□□ -1.7
RGPD1-203ENST00000428128 POLR3GLQ9BT43 218 aa4.44□□□□□ -1.7
RGPD1-203ENST00000428128 MFRPQ9BY79 579 aa4.44□□□□□ -1.7
RGPD1-203ENST00000428128 IVNS1ABPQ9Y6Y0 642 aa4.44□□□□□ -1.7
RGPD1-203ENST00000428128 ABCA3Q99758 1704 aa4.44□□□□□ -1.7
RGPD1-203ENST00000428128 CAMSAP1Q5T5Y3 1602 aa4.44□□□□□ -1.7
RGPD1-203ENST00000428128 NOP9Q86U38 636 aaKnown RBP4.44□□□□□ -1.7
RGPD1-203ENST00000428128 DUOX2Q9NRD8 1548 aa4.44□□□□□ -1.7
RGPD1-203ENST00000428128 USP32Q8NFA0 1604 aa4.43□□□□□ -1.7
RGPD1-203ENST00000428128 CRISPLD2Q9H0B8 497 aa4.43□□□□□ -1.7
RGPD1-203ENST00000428128 CUEDC1Q9NWM3 386 aaPredicted RBP4.43□□□□□ -1.7
RGPD1-203ENST00000428128 ZC3H6P61129 1189 aaKnown RBP4.43□□□□□ -1.7
RGPD1-203ENST00000428128 FBXO22Q8NEZ5 403 aa4.43□□□□□ -1.7
RGPD1-203ENST00000428128 RTEL1-TNFRSF6BF6WH68 1400 aa4.43□□□□□ -1.7
RGPD1-203ENST00000428128 EEA1Q15075 1411 aa4.43□□□□□ -1.7
RGPD1-203ENST00000428128 KDM4AO75164 1064 aa4.42□□□□□ -1.7
RGPD1-203ENST00000428128 C7P10643 843 aa4.42□□□□□ -1.7
RGPD1-203ENST00000428128 SLC52A1Q9NWF4 448 aa4.42□□□□□ -1.7
RGPD1-203ENST00000428128 COL16A1Q07092 1604 aaPredicted RBP4.42□□□□□ -1.7
RGPD1-203ENST00000428128 ATP10AO60312 1499 aa4.42□□□□□ -1.7
RGPD1-203ENST00000428128 MLLT3P42568 568 aaPredicted RBP4.42□□□□□ -1.7
RGPD1-203ENST00000428128 SF3A1Q15459 793 aaKnown RBP4.42□□□□□ -1.7
RGPD1-203ENST00000428128 CFAP70Q5T0N1 1121 aa4.42□□□□□ -1.7
RGPD1-203ENST00000428128 NPAS4Q8IUM7 802 aa4.42□□□□□ -1.7
RGPD1-203ENST00000428128 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.42□□□□□ -1.7
RGPD1-203ENST00000428128 IGF1RP08069 1367 aa4.42□□□□□ -1.7
RGPD1-203ENST00000428128 ZNF16P17020 682 aaPredicted RBP4.42□□□□□ -1.7
RGPD1-203ENST00000428128 CCDC102AQ96A19 550 aa4.42□□□□□ -1.7
RGPD1-203ENST00000428128 PPME1Q9Y570 386 aa4.42□□□□□ -1.7
RGPD1-203ENST00000428128 MS4A1P11836 297 aa4.41□□□□□ -1.7
RGPD1-203ENST00000428128 QRICH2Q9H0J4 1663 aa4.41□□□□□ -1.7
RGPD1-203ENST00000428128 IFT172Q9UG01 1749 aa4.41□□□□□ -1.7
RGPD1-203ENST00000428128 YEATS2Q9ULM3 1422 aa4.41□□□□□ -1.7
RGPD1-203ENST00000428128 ZNF518AQ6AHZ1 1483 aa4.41□□□□□ -1.7
RGPD1-203ENST00000428128 MARCH6O60337 910 aa4.41□□□□□ -1.7
RGPD1-203ENST00000428128 ZNF326Q5BKZ1 582 aaKnown RBP4.41□□□□□ -1.7
RGPD1-203ENST00000428128 METTL14Q9HCE5 456 aaKnown RBP4.41□□□□□ -1.7
RGPD1-203ENST00000428128 KIAA1107Q9UPP5 1409 aa4.41□□□□□ -1.7
RGPD1-203ENST00000428128 CLTCQ00610 1675 aaKnown RBP4.41□□□□□ -1.7
RGPD1-203ENST00000428128 MAGEC2Q9UBF1 373 aaPredicted RBP4.41□□□□□ -1.7
RGPD1-203ENST00000428128 RBM46Q8TBY0 533 aaKnown RBP4.4□□□□□ -1.7
RGPD1-203ENST00000428128 KIF27Q86VH2 1401 aa4.4□□□□□ -1.7
RGPD1-203ENST00000428128 NALCNQ8IZF0 1738 aa4.4□□□□□ -1.7
RGPD1-203ENST00000428128 MNX1P50219 401 aaPredicted RBP4.4□□□□□ -1.71
RGPD1-203ENST00000428128 ARMC5Q96C12 935 aa4.4□□□□□ -1.71
RGPD1-203ENST00000428128 AKNAQ7Z591 1439 aa4.4□□□□□ -1.71
RGPD1-203ENST00000428128 PLCH1Q4KWH8 1693 aa4.4□□□□□ -1.71
RGPD1-203ENST00000428128 NKTRP30414 1462 aaKnown RBP4.4□□□□□ -1.71
RGPD1-203ENST00000428128 NUP153P49790 1475 aaKnown RBP4.4□□□□□ -1.71
RGPD1-203ENST00000428128 ATG7O95352 703 aa4.4□□□□□ -1.71
RGPD1-203ENST00000428128 TUSC1Q2TAM9 212 aa4.4□□□□□ -1.71
RGPD1-203ENST00000428128 ZNF330Q9Y3S2 320 aaPredicted RBP4.4□□□□□ -1.71
RGPD1-203ENST00000428128 A2ML1A8K2U0 1454 aa4.39□□□□□ -1.71
RGPD1-203ENST00000428128 NLRP1Q9C000 1473 aa4.39□□□□□ -1.71
RGPD1-203ENST00000428128 ARHGAP31Q2M1Z3 1444 aa4.39□□□□□ -1.71
RGPD1-203ENST00000428128 ARID4BQ4LE39 1312 aaPredicted RBP4.39□□□□□ -1.71
RGPD1-203ENST00000428128 EIF3JO75822 258 aaKnown RBP4.39□□□□□ -1.71
RGPD1-203ENST00000428128 HSP90AB4PQ58FF6 505 aa4.39□□□□□ -1.71
RGPD1-203ENST00000428128 LARGE2Q8N3Y3 721 aa4.39□□□□□ -1.71
RGPD1-203ENST00000428128 CCDC18Q5T9S5 1454 aa4.39□□□□□ -1.71
RGPD1-203ENST00000428128 ANKRD62A6NC57 917 aa4.39□□□□□ -1.71
RGPD1-203ENST00000428128 ELOAQ14241 798 aaKnown RBP4.39□□□□□ -1.71
RGPD1-203ENST00000428128 PPP2R2DQ66LE6 453 aa4.39□□□□□ -1.71
RGPD1-203ENST00000428128 GIMAP6Q6P9H5 292 aa4.39□□□□□ -1.71
RGPD1-203ENST00000428128 UBA5Q9GZZ9 404 aa4.39□□□□□ -1.71
RGPD1-203ENST00000428128 RGPD1P0DJD0 1748 aa4.39□□□□□ -1.71
RGPD1-203ENST00000428128 SPDYE16A6NNV3 312 aaPredicted RBP4.38□□□□□ -1.71
RGPD1-203ENST00000428128 PPP1R37O75864 691 aa4.38□□□□□ -1.71
RGPD1-203ENST00000428128 NME8Q8N427 588 aa4.38□□□□□ -1.71
RGPD1-203ENST00000428128 EGFLAMQ63HQ2 1017 aa4.38□□□□□ -1.71
RGPD1-203ENST00000428128 VRTNQ9H8Y1 702 aa4.38□□□□□ -1.71
RGPD1-203ENST00000428128 TPD52L2O43399 206 aaKnown RBP4.38□□□□□ -1.71
RGPD1-203ENST00000428128 SMC5Q8IY18 1101 aa4.38□□□□□ -1.71
RGPD1-203ENST00000428128 SLC43A3Q8NBI5 491 aa4.38□□□□□ -1.71
RGPD1-203ENST00000428128 TBC1D2Q9BYX2 928 aa4.38□□□□□ -1.71
RGPD1-203ENST00000428128 PLCH2O75038 1416 aa4.38□□□□□ -1.71
RGPD1-203ENST00000428128 CICQ96RK0 1608 aaPredicted RBP4.38□□□□□ -1.71
RGPD1-203ENST00000428128 CEP152O94986 1710 aa4.37□□□□□ -1.71
RGPD1-203ENST00000428128 POTEIP0CG38 1075 aa4.37□□□□□ -1.71
RGPD1-203ENST00000428128 NRAPQ86VF7 1730 aa4.37□□□□□ -1.71
RGPD1-203ENST00000428128 TNS1Q9HBL0 1735 aaKnown RBP4.37□□□□□ -1.71
RGPD1-203ENST00000428128 ADGRB3O60242 1522 aa4.37□□□□□ -1.71
RGPD1-203ENST00000428128 SHANK2Q9UPX8 1470 aa4.37□□□□□ -1.71
RGPD1-203ENST00000428128 GRIPAP1Q4V328 841 aa4.37□□□□□ -1.71
RGPD1-203ENST00000428128 CDCA7Q9BWT1 371 aaPredicted RBP4.37□□□□□ -1.71
RGPD1-203ENST00000428128 TLDC2A0PJX2 215 aa4.37□□□□□ -1.71
RGPD1-203ENST00000428128 PDE4AP27815 886 aa4.37□□□□□ -1.71
RGPD1-203ENST00000428128 PDIA6Q15084 440 aa4.37□□□□□ -1.71
RGPD1-203ENST00000428128 MST1RQ04912 1400 aa4.36□□□□□ -1.71
RGPD1-203ENST00000428128 CSB-PGBD3P0DP91 1061 aa4.36□□□□□ -1.71
RGPD1-203ENST00000428128 PSME1Q06323 249 aa4.36□□□□□ -1.71
RGPD1-203ENST00000428128 GLMNQ92990 594 aa4.36□□□□□ -1.71
RGPD1-203ENST00000428128 PZPP20742 1482 aa4.36□□□□□ -1.71
RGPD1-203ENST00000428128 LAMB1P07942 1786 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms