RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 CDK5RAP3Q96JB5 506 aa13.55□□□□□ -0.24
POLR2J4-202ENST00000427076 KRT18P05783 430 aaKnown RBP13.54□□□□□ -0.24
POLR2J4-202ENST00000427076 FIBPO43427 364 aa13.54□□□□□ -0.24
POLR2J4-202ENST00000427076 SEPT11Q9NVA2 429 aaKnown RBP13.54□□□□□ -0.24
POLR2J4-202ENST00000427076 PDCL3Q9H2J4 239 aa13.54□□□□□ -0.24
POLR2J4-202ENST00000427076 KINO60870 393 aaKnown RBP13.54□□□□□ -0.24
POLR2J4-202ENST00000427076 PANK3Q9H999 370 aa13.54□□□□□ -0.24
POLR2J4-202ENST00000427076 IRX3P78415 501 aaPredicted RBP13.54□□□□□ -0.24
POLR2J4-202ENST00000427076 TMCO4Q5TGY1 634 aa13.54□□□□□ -0.24
POLR2J4-202ENST00000427076 TANGO6Q9C0B7 1094 aa13.54□□□□□ -0.24
POLR2J4-202ENST00000427076 LRRFIP2Q9Y608 721 aaKnown RBP13.54□□□□□ -0.24
POLR2J4-202ENST00000427076 IGSF3O75054 1194 aa13.53□□□□□ -0.24
POLR2J4-202ENST00000427076 CCDC112Q8NEF3 446 aa13.53□□□□□ -0.24
POLR2J4-202ENST00000427076 EZRP15311 586 aaKnown RBP13.53□□□□□ -0.24
POLR2J4-202ENST00000427076 ZHX3Q9H4I2 956 aa13.53□□□□□ -0.24
POLR2J4-202ENST00000427076 CCP110O43303 1012 aa13.53□□□□□ -0.24
POLR2J4-202ENST00000427076 FKBP5Q13451 457 aaPredicted RBP13.53□□□□□ -0.24
POLR2J4-202ENST00000427076 ATP2C2O75185 946 aa13.53□□□□□ -0.24
POLR2J4-202ENST00000427076 DDX19BQ9UMR2 479 aa13.53□□□□□ -0.24
POLR2J4-202ENST00000427076 LRRCC1Q9C099 1032 aa13.52□□□□□ -0.24
POLR2J4-202ENST00000427076 CFAP45Q9UL16 551 aa13.52□□□□□ -0.24
POLR2J4-202ENST00000427076 PSME1Q06323 249 aa13.52□□□□□ -0.25
POLR2J4-202ENST00000427076 DZIP1LQ8IYY4 767 aaKnown RBP13.52□□□□□ -0.25
POLR2J4-202ENST00000427076 PPP4R3BQ5MIZ7 849 aa13.52□□□□□ -0.25
POLR2J4-202ENST00000427076 MYBBP1AQ9BQG0 1328 aaKnown RBP13.52□□□□□ -0.25
POLR2J4-202ENST00000427076 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.51□□□□□ -0.25
POLR2J4-202ENST00000427076 APAF1O14727 1248 aa13.51□□□□□ -0.25
POLR2J4-202ENST00000427076 AIMP1Q12904 312 aaKnown RBP13.51□□□□□ -0.25
POLR2J4-202ENST00000427076 XPCQ01831 940 aaPredicted RBP13.51□□□□□ -0.25
POLR2J4-202ENST00000427076 ZNHIT6Q9NWK9 470 aaKnown RBP13.51□□□□□ -0.25
POLR2J4-202ENST00000427076 CCDC113Q9H0I3 377 aa13.51□□□□□ -0.25
POLR2J4-202ENST00000427076 GBP2P32456 591 aaPredicted RBP13.5□□□□□ -0.25
POLR2J4-202ENST00000427076 LETM1O95202 739 aaPredicted RBP13.5□□□□□ -0.25
POLR2J4-202ENST00000427076 STK3Q13188 491 aa13.5□□□□□ -0.25
POLR2J4-202ENST00000427076 PPFIBP1Q86W92 1011 aa13.5□□□□□ -0.25
POLR2J4-202ENST00000427076 EIF3JO75822 258 aaKnown RBP13.5□□□□□ -0.25
POLR2J4-202ENST00000427076 XBP1P17861 261 aa13.5□□□□□ -0.25
POLR2J4-202ENST00000427076 GRPEL1Q9HAV7 217 aa13.5□□□□□ -0.25
POLR2J4-202ENST00000427076 USP8P40818 1118 aa13.5□□□□□ -0.25
POLR2J4-202ENST00000427076 HMGN5P82970 282 aaKnown RBP13.5□□□□□ -0.25
POLR2J4-202ENST00000427076 PPP1R1BQ9UD71 204 aaPredicted RBP13.5□□□□□ -0.25
POLR2J4-202ENST00000427076 MINK1Q8N4C8 1332 aaPredicted RBP13.49□□□□□ -0.25
POLR2J4-202ENST00000427076 WWC2Q6AWC2 1192 aa13.49□□□□□ -0.25
POLR2J4-202ENST00000427076 KIF15Q9NS87 1388 aa13.49□□□□□ -0.25
POLR2J4-202ENST00000427076 ERLIN1O75477 346 aa13.49□□□□□ -0.25
POLR2J4-202ENST00000427076 PANK1Q8TE04 598 aa13.48□□□□□ -0.25
POLR2J4-202ENST00000427076 ERC2O15083 957 aa13.48□□□□□ -0.25
POLR2J4-202ENST00000427076 MAP2K1Q02750 393 aaPredicted RBP13.48□□□□□ -0.25
POLR2J4-202ENST00000427076 CEP63Q96MT8 703 aa13.48□□□□□ -0.25
POLR2J4-202ENST00000427076 STK38Q15208 465 aa13.47□□□□□ -0.25
POLR2J4-202ENST00000427076 FSD1Q9BTV5 496 aa13.47□□□□□ -0.25
POLR2J4-202ENST00000427076 FAM177BA6PVY3 158 aa13.47□□□□□ -0.25
POLR2J4-202ENST00000427076 DDX58O95786 925 aaKnown RBP13.47□□□□□ -0.25
POLR2J4-202ENST00000427076 SSR1P43307 286 aaKnown RBP13.47□□□□□ -0.25
POLR2J4-202ENST00000427076 RIPK4P57078 832 aa13.47□□□□□ -0.25
POLR2J4-202ENST00000427076 CDC45O75419 566 aa13.47□□□□□ -0.25
POLR2J4-202ENST00000427076 L3MBTL2Q969R5 705 aa13.47□□□□□ -0.25
POLR2J4-202ENST00000427076 KANK4Q5T7N3 995 aaPredicted RBP13.46□□□□□ -0.25
POLR2J4-202ENST00000427076 NEK4P51957 841 aa13.46□□□□□ -0.26
POLR2J4-202ENST00000427076 RABEP1Q15276 862 aa13.46□□□□□ -0.26
POLR2J4-202ENST00000427076 TMCO3Q6UWJ1 677 aa13.46□□□□□ -0.26
POLR2J4-202ENST00000427076 RAB3GAP2Q9H2M9 1393 aa13.46□□□□□ -0.26
POLR2J4-202ENST00000427076 ARID4AP29374 1257 aaPredicted RBP13.45□□□□□ -0.26
POLR2J4-202ENST00000427076 DNA2P51530 1060 aa13.45□□□□□ -0.26
POLR2J4-202ENST00000427076 PHLDB1Q86UU1 1377 aa13.45□□□□□ -0.26
POLR2J4-202ENST00000427076 PSMA5P28066 241 aa13.45□□□□□ -0.26
POLR2J4-202ENST00000427076 TXLNAP40222 546 aa13.45□□□□□ -0.26
POLR2J4-202ENST00000427076 TNMDQ9H2S6 317 aa13.45□□□□□ -0.26
POLR2J4-202ENST00000427076 ATP2B2Q01814 1243 aa13.45□□□□□ -0.26
POLR2J4-202ENST00000427076 RIC3Q7Z5B4 369 aa13.45□□□□□ -0.26
POLR2J4-202ENST00000427076 EVC2Q86UK5 1308 aa13.44□□□□□ -0.26
POLR2J4-202ENST00000427076 NEBLO76041 1014 aa13.44□□□□□ -0.26
POLR2J4-202ENST00000427076 UBE4AQ14139 1066 aa13.44□□□□□ -0.26
POLR2J4-202ENST00000427076 NUTM2GQ5VZR2 741 aa13.43□□□□□ -0.26
POLR2J4-202ENST00000427076 API5Q9BZZ5 524 aaKnown RBP13.43□□□□□ -0.26
POLR2J4-202ENST00000427076 MAP4K4O95819 1239 aaPredicted RBP13.43□□□□□ -0.26
POLR2J4-202ENST00000427076 FAM107BQ9H098 131 aa13.43□□□□□ -0.26
POLR2J4-202ENST00000427076 CNTROBQ8N137 903 aa13.43□□□□□ -0.26
POLR2J4-202ENST00000427076 ZNF396Q96N95 335 aaPredicted RBP13.43□□□□□ -0.26
POLR2J4-202ENST00000427076 ST20-MTHFSA0A0A6YYL1 179 aa13.43□□□□□ -0.26
POLR2J4-202ENST00000427076 TMCO5BA8MYB1 307 aa13.43□□□□□ -0.26
POLR2J4-202ENST00000427076 SOGA1O94964 1423 aa13.43□□□□□ -0.26
POLR2J4-202ENST00000427076 NINLQ9Y2I6 1382 aa13.42□□□□□ -0.26
POLR2J4-202ENST00000427076 ME1P48163 572 aa13.42□□□□□ -0.26
POLR2J4-202ENST00000427076 MBD3O95983 291 aa13.42□□□□□ -0.26
POLR2J4-202ENST00000427076 CCDC192P0DO97 292 aa13.42□□□□□ -0.26
POLR2J4-202ENST00000427076 MNAT1P51948 309 aa13.42□□□□□ -0.26
POLR2J4-202ENST00000427076 SHTN1A0MZ66 631 aa13.42□□□□□ -0.26
POLR2J4-202ENST00000427076 FILIP1Q7Z7B0 1213 aa13.42□□□□□ -0.26
POLR2J4-202ENST00000427076 SLC26A8Q96RN1 970 aa13.42□□□□□ -0.26
POLR2J4-202ENST00000427076 TSPYL4Q9UJ04 414 aa13.42□□□□□ -0.26
POLR2J4-202ENST00000427076 CAMK4Q16566 473 aa13.42□□□□□ -0.26
POLR2J4-202ENST00000427076 TTC16Q8NEE8 873 aa13.42□□□□□ -0.26
POLR2J4-202ENST00000427076 CCDC160A6NGH7 325 aa13.41□□□□□ -0.26
POLR2J4-202ENST00000427076 HMOX1P09601 288 aa13.41□□□□□ -0.26
POLR2J4-202ENST00000427076 KIAA1328Q86T90 577 aa13.41□□□□□ -0.26
POLR2J4-202ENST00000427076 C1orf115Q9H7X2 142 aa13.41□□□□□ -0.26
POLR2J4-202ENST00000427076 GOPCQ9HD26 462 aa13.41□□□□□ -0.26
POLR2J4-202ENST00000427076 MATR3P43243 847 aaKnown RBP eCLIP13.41□□□□□ -0.26
POLR2J4-202ENST00000427076 PPM1FP49593 454 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms